Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P28_pT_C24
(597 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U39743-2|AAA80437.6| 310|Caenorhabditis elegans Carbonic anhydr... 67 8e-12
U41539-1|AAB52498.1| 246|Caenorhabditis elegans Carbonic anhydr... 57 8e-09
Z68118-4|CAD18873.1| 235|Caenorhabditis elegans Hypothetical pr... 50 2e-06
Z68118-3|CAA92190.2| 280|Caenorhabditis elegans Hypothetical pr... 50 2e-06
U12966-4|AAA20616.1| 365|Caenorhabditis elegans Carbonic anhydr... 44 6e-05
AF000198-1|AAB53054.1| 319|Caenorhabditis elegans Carbonic anhy... 43 2e-04
U23517-10|AAB93341.3| 337|Caenorhabditis elegans Carbonic anhyd... 38 0.004
U41746-9|AAA83334.3| 559|Caenorhabditis elegans Groundhog (hedg... 31 0.47
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 30 1.1
U41035-2|AAM69088.1| 1371|Caenorhabditis elegans Uncoordinated p... 29 1.9
U41035-1|AAB37028.2| 1563|Caenorhabditis elegans Uncoordinated p... 29 1.9
AF257062-1|AAK49331.1| 1563|Caenorhabditis elegans Rab3-interact... 29 1.9
Z75710-9|CAB00024.2| 752|Caenorhabditis elegans Hypothetical pr... 29 2.5
U80846-5|AAP82647.1| 825|Caenorhabditis elegans Hypothetical pr... 29 2.5
U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical pr... 29 2.5
Z22175-2|CAA80131.2| 520|Caenorhabditis elegans Hypothetical pr... 28 4.4
Z11115-20|CAA77460.2| 520|Caenorhabditis elegans Hypothetical p... 28 4.4
U41994-8|AAK31524.1| 752|Caenorhabditis elegans Hypothetical pr... 28 4.4
U13644-7|AAM48536.2| 700|Caenorhabditis elegans Hypothetical pr... 28 4.4
U13644-6|AAB52678.1| 739|Caenorhabditis elegans Hypothetical pr... 28 4.4
AF047655-5|AAC04399.1| 820|Caenorhabditis elegans Hypothetical ... 27 7.7
>U39743-2|AAA80437.6| 310|Caenorhabditis elegans Carbonic anhydrase
protein 5 protein.
Length = 310
Score = 67.3 bits (157), Expect = 8e-12
Identities = 33/70 (47%), Positives = 44/70 (62%)
Frame = -2
Query: 491 LDTERFYTYKGSLTTPPCAEAVTWVIFSDYLPISVFQMDNFRGLLSNLNLPLVDNFRQLQ 312
LDTE FY Y+GSLTTP C+EAV W + ++ + IS Q+ R L + + N+R LQ
Sbjct: 210 LDTEAFYRYEGSLTTPDCSEAVIWTVLAEPMAISSHQLHLLRQLHNKELVKSDKNYRPLQ 269
Query: 311 PLFGRRVFVR 282
PL GRR+ R
Sbjct: 270 PLNGRRIQYR 279
>U41539-1|AAB52498.1| 246|Caenorhabditis elegans Carbonic anhydrase
protein 3 protein.
Length = 246
Score = 57.2 bits (132), Expect = 8e-09
Identities = 25/62 (40%), Positives = 40/62 (64%)
Frame = -2
Query: 476 FYTYKGSLTTPPCAEAVTWVIFSDYLPISVFQMDNFRGLLSNLNLPLVDNFRQLQPLFGR 297
F+ Y+GSLTTPPC+E VTW IF++ + ++ Q++ FR + P+ N+R Q L R
Sbjct: 179 FWRYEGSLTTPPCSEIVTWTIFTEPVTVTHDQLELFRQVQDIEKRPIKKNYRPTQNLNDR 238
Query: 296 RV 291
++
Sbjct: 239 KI 240
>Z68118-4|CAD18873.1| 235|Caenorhabditis elegans Hypothetical
protein R01E6.3b protein.
Length = 235
Score = 49.6 bits (113), Expect = 2e-06
Identities = 21/58 (36%), Positives = 33/58 (56%)
Frame = -2
Query: 530 LPHTFSLSSILSGLDTERFYTYKGSLTTPPCAEAVTWVIFSDYLPISVFQMDNFRGLL 357
+P F + +L D F TY GSLTTPP E V W +F++ + +S Q++ R ++
Sbjct: 157 MPKDFHIEHLLPSPDKREFVTYLGSLTTPPYNECVIWTLFTEPVEVSFGQLNVLRNII 214
>Z68118-3|CAA92190.2| 280|Caenorhabditis elegans Hypothetical
protein R01E6.3a protein.
Length = 280
Score = 49.6 bits (113), Expect = 2e-06
Identities = 21/58 (36%), Positives = 33/58 (56%)
Frame = -2
Query: 530 LPHTFSLSSILSGLDTERFYTYKGSLTTPPCAEAVTWVIFSDYLPISVFQMDNFRGLL 357
+P F + +L D F TY GSLTTPP E V W +F++ + +S Q++ R ++
Sbjct: 202 MPKDFHIEHLLPSPDKREFVTYLGSLTTPPYNECVIWTLFTEPVEVSFGQLNVLRNII 259
>U12966-4|AAA20616.1| 365|Caenorhabditis elegans Carbonic anhydrase
protein 1 protein.
Length = 365
Score = 44.4 bits (100), Expect = 6e-05
Identities = 25/76 (32%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Frame = -2
Query: 485 TERFYTYKGSLTTPPCAEAVTWVIFSDYLPISVFQMDNFRGLLSNL----NLPLVDNFRQ 318
T TY+GSLT+P C E VTW+I + + I + + L ++ +P+ NFR+
Sbjct: 284 TRDIITYEGSLTSPGCHETVTWIILNQPIFIKKEHFEEWSHLYLSMEGAEKVPVAPNFRK 343
Query: 317 LQPLFGRRVFVRITSK 270
+Q R V I K
Sbjct: 344 IQETNNRLVRTNIQHK 359
>AF000198-1|AAB53054.1| 319|Caenorhabditis elegans Carbonic
anhydrase protein 6 protein.
Length = 319
Score = 42.7 bits (96), Expect = 2e-04
Identities = 18/40 (45%), Positives = 24/40 (60%)
Frame = -2
Query: 485 TERFYTYKGSLTTPPCAEAVTWVIFSDYLPISVFQMDNFR 366
T+ F+ Y+GS TT P E V W++ LPIS Q+D R
Sbjct: 232 TKEFWMYEGSETTDPFRETVNWIVIRAALPISSHQLDKLR 271
>U23517-10|AAB93341.3| 337|Caenorhabditis elegans Carbonic
anhydrase protein 2 protein.
Length = 337
Score = 38.3 bits (85), Expect = 0.004
Identities = 16/32 (50%), Positives = 22/32 (68%)
Frame = -2
Query: 485 TERFYTYKGSLTTPPCAEAVTWVIFSDYLPIS 390
T + TY+GSLT P C E VTWVI ++ + I+
Sbjct: 201 TSHYVTYEGSLTFPGCHETVTWVILNNPIYIT 232
>U41746-9|AAA83334.3| 559|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 6 protein.
Length = 559
Score = 31.5 bits (68), Expect = 0.47
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = -3
Query: 295 VSSSESHQRTLSSRRPNSTTPNGTGLDTRSPKMTSS 188
V+ + + R ++RRP +TTP T TR PK T++
Sbjct: 347 VTQAPTTPRATTTRRPTTTTPRPTPRRTRRPKTTTA 382
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical
protein K06A9.1b protein.
Length = 2232
Score = 30.3 bits (65), Expect = 1.1
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = -3
Query: 331 ITSGSYNRCLVAVSSSESHQRTLSSRRPNSTTPNGTGLDTRSPKMTSSTS 182
+T GS S + S +S+ PN +T +G+ + T+SP + STS
Sbjct: 828 VTVGSTEASTSGSSVASSSPAPSTSQNPNPSTSSGSSMITQSPYPSQSTS 877
Score = 29.1 bits (62), Expect = 2.5
Identities = 18/40 (45%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Frame = -3
Query: 295 VSSSESHQRTLSSRRPN--STTPNGTGLDTRSPKMTSSTS 182
V SS S Q + S PN STTP+ T + SP M S+S
Sbjct: 590 VPSSSSPQPSSQSPAPNTGSTTPSQTSSQSPSPSMNPSSS 629
>U41035-2|AAM69088.1| 1371|Caenorhabditis elegans Uncoordinated
protein 10, isoform b protein.
Length = 1371
Score = 29.5 bits (63), Expect = 1.9
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = -3
Query: 280 SHQRTLSSRRPNSTTPNGTGLDTRSPKMTSSTSMNKYIYI 161
+ QRT ++R +T G G+ R P + +T MNKY ++
Sbjct: 334 NEQRTDNNRMRENTNGQG-GMFNRQPSLEQTTPMNKYNHV 372
>U41035-1|AAB37028.2| 1563|Caenorhabditis elegans Uncoordinated
protein 10, isoform a protein.
Length = 1563
Score = 29.5 bits (63), Expect = 1.9
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = -3
Query: 280 SHQRTLSSRRPNSTTPNGTGLDTRSPKMTSSTSMNKYIYI 161
+ QRT ++R +T G G+ R P + +T MNKY ++
Sbjct: 334 NEQRTDNNRMRENTNGQG-GMFNRQPSLEQTTPMNKYNHV 372
>AF257062-1|AAK49331.1| 1563|Caenorhabditis elegans Rab3-interacting
molecule UNC-10 protein.
Length = 1563
Score = 29.5 bits (63), Expect = 1.9
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = -3
Query: 280 SHQRTLSSRRPNSTTPNGTGLDTRSPKMTSSTSMNKYIYI 161
+ QRT ++R +T G G+ R P + +T MNKY ++
Sbjct: 334 NEQRTDNNRMRENTNGQG-GMFNRQPSLEQTTPMNKYNHV 372
>Z75710-9|CAB00024.2| 752|Caenorhabditis elegans Hypothetical
protein D1081.3 protein.
Length = 752
Score = 29.1 bits (62), Expect = 2.5
Identities = 18/53 (33%), Positives = 26/53 (49%)
Frame = -3
Query: 298 AVSSSESHQRTLSSRRPNSTTPNGTGLDTRSPKMTSSTSMNKYIYIYPITTDK 140
A SSS + T NS+ PN ++T K ++TS + YI + PI K
Sbjct: 611 ASSSSNQPEATTQQIVQNSSDPNSPNVNTNPSKNRNTTSNSNYIEL-PIDEGK 662
>U80846-5|AAP82647.1| 825|Caenorhabditis elegans Hypothetical
protein K06A9.1c protein.
Length = 825
Score = 29.1 bits (62), Expect = 2.5
Identities = 18/40 (45%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Frame = -3
Query: 295 VSSSESHQRTLSSRRPN--STTPNGTGLDTRSPKMTSSTS 182
V SS S Q + S PN STTP+ T + SP M S+S
Sbjct: 383 VPSSSSPQPSSQSPAPNTGSTTPSQTSSQSPSPSMNPSSS 422
>U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical
protein K06A9.1a protein.
Length = 1032
Score = 29.1 bits (62), Expect = 2.5
Identities = 18/40 (45%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Frame = -3
Query: 295 VSSSESHQRTLSSRRPN--STTPNGTGLDTRSPKMTSSTS 182
V SS S Q + S PN STTP+ T + SP M S+S
Sbjct: 590 VPSSSSPQPSSQSPAPNTGSTTPSQTSSQSPSPSMNPSSS 629
>Z22175-2|CAA80131.2| 520|Caenorhabditis elegans Hypothetical
protein ZK637.1 protein.
Length = 520
Score = 28.3 bits (60), Expect = 4.4
Identities = 21/77 (27%), Positives = 36/77 (46%)
Frame = -2
Query: 545 AFFYQLPHTFSLSSILSGLDTERFYTYKGSLTTPPCAEAVTWVIFSDYLPISVFQMDNFR 366
A+ Y P + + GL T G++ TP A+ + S LPI ++
Sbjct: 443 AYVYT-PEVYPTTLRAVGLGTCSAMARIGAIVTPFIAQVASEKSLS--LPIGIYGTAAIL 499
Query: 365 GLLSNLNLPLVDNFRQL 315
GL+++L+LP+ RQ+
Sbjct: 500 GLIASLSLPIETKGRQM 516
>Z11115-20|CAA77460.2| 520|Caenorhabditis elegans Hypothetical
protein ZK637.1 protein.
Length = 520
Score = 28.3 bits (60), Expect = 4.4
Identities = 21/77 (27%), Positives = 36/77 (46%)
Frame = -2
Query: 545 AFFYQLPHTFSLSSILSGLDTERFYTYKGSLTTPPCAEAVTWVIFSDYLPISVFQMDNFR 366
A+ Y P + + GL T G++ TP A+ + S LPI ++
Sbjct: 443 AYVYT-PEVYPTTLRAVGLGTCSAMARIGAIVTPFIAQVASEKSLS--LPIGIYGTAAIL 499
Query: 365 GLLSNLNLPLVDNFRQL 315
GL+++L+LP+ RQ+
Sbjct: 500 GLIASLSLPIETKGRQM 516
>U41994-8|AAK31524.1| 752|Caenorhabditis elegans Hypothetical
protein F59A6.4 protein.
Length = 752
Score = 28.3 bits (60), Expect = 4.4
Identities = 15/43 (34%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Frame = -3
Query: 298 AVSSSESHQRTLSSRRPNSTTPNGTGLDTRS-PKMTSSTSMNK 173
AV++S++ S R TTPNG T+S K++++++MN+
Sbjct: 24 AVAASKARTPEGSGRGKKPTTPNGVANPTKSKTKVSTASTMNE 66
>U13644-7|AAM48536.2| 700|Caenorhabditis elegans Hypothetical
protein F56D2.6b protein.
Length = 700
Score = 28.3 bits (60), Expect = 4.4
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = +2
Query: 365 HGNYPFETRKWAGSQKRSPM*RLQHREEWSMILCTCRTFQCPSQTGLT 508
+ N PF R WA +KRS + +++E++ +L R QC + G T
Sbjct: 57 YNNQPFSNRYWAIWEKRSQLPVWEYKEKFMELL---RNNQCITLVGET 101
>U13644-6|AAB52678.1| 739|Caenorhabditis elegans Hypothetical
protein F56D2.6a protein.
Length = 739
Score = 28.3 bits (60), Expect = 4.4
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = +2
Query: 365 HGNYPFETRKWAGSQKRSPM*RLQHREEWSMILCTCRTFQCPSQTGLT 508
+ N PF R WA +KRS + +++E++ +L R QC + G T
Sbjct: 57 YNNQPFSNRYWAIWEKRSQLPVWEYKEKFMELL---RNNQCITLVGET 101
>AF047655-5|AAC04399.1| 820|Caenorhabditis elegans Hypothetical
protein C17B7.5 protein.
Length = 820
Score = 27.5 bits (58), Expect = 7.7
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +1
Query: 301 PNNGCNCLKLSTNGKLRLERRP 366
PN+ NC+ + TNG L+ E+ P
Sbjct: 383 PNSLDNCMDIPTNGSLQFEKPP 404
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,756,916
Number of Sequences: 27780
Number of extensions: 267984
Number of successful extensions: 782
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 735
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 776
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1268802960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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