Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P28_pT_C22
(618 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_02_1151 - 24712200-24713750,24714587-24715009,24716076-24716201 157 7e-39
09_04_0546 - 18460309-18461859,18462593-18463015,18463415-18463540 155 4e-38
09_04_0550 - 18481095-18481496,18482623-18483898,18485769-18485821 151 4e-37
09_04_0548 - 18469636-18470037,18471164-18472705,18474052-184744... 151 4e-37
04_01_0042 + 473912-474058,474208-474349,474442-476264 146 1e-35
06_03_1404 - 29928792-29929040,29929147-29929551,29930130-299302... 89 3e-18
09_04_0497 - 18096299-18096496,18096586-18096675,18096809-180969... 84 7e-17
08_02_1073 - 24117834-24118037,24118122-24118211,24118299-241184... 82 4e-16
12_02_0522 - 19960092-19960595,19962737-19962880,19963042-199631... 73 2e-13
05_07_0128 + 27879969-27880143,27880232-27881323,27883562-278836... 30 1.7
01_01_0645 + 4890647-4890682,4891684-4891929,4892021-4892317,489... 30 1.7
12_01_0179 - 1319291-1319332,1319884-1320579,1322759-1323207,132... 29 3.9
11_06_0325 + 22376195-22377001,22377136-22377525,22377638-223777... 29 3.9
11_01_0179 - 1412391-1412863,1412947-1413412,1413504-1414551,141... 29 3.9
05_01_0300 + 2340251-2340791,2340892-2341325 29 3.9
08_01_0835 + 8147177-8147359,8147871-8147968,8148045-8148102,814... 28 5.2
03_02_0004 - 4869853-4871106 28 5.2
01_06_0747 - 31645136-31646521,31647870-31648142,31649080-316491... 28 5.2
12_01_0357 + 2720860-2721066,2721169-2721384,2721481-2723608,272... 28 6.8
07_03_1265 + 25304408-25304545,25304895-25305032,25305746-253058... 28 6.8
04_01_0063 - 630345-633743 28 6.8
06_01_0243 - 1837830-1837886,1837969-1838016,1838113-1838255,183... 27 9.0
05_06_0132 + 25893241-25893435,25894266-25894487,25894567-258948... 27 9.0
02_04_0486 - 23351960-23353093 27 9.0
02_04_0483 - 23305492-23306625 27 9.0
>08_02_1151 - 24712200-24713750,24714587-24715009,24716076-24716201
Length = 699
Score = 157 bits (381), Expect = 7e-39
Identities = 78/122 (63%), Positives = 101/122 (82%)
Frame = -3
Query: 616 MXRIMKAQALRDTSTMGYMAAKKHLEINPDHSIVETLRQKAEADKNDKAVKDLVILLYET 437
M RIMKAQALRD+S GYM++KK +EINP+++I+E LR++A+ADKNDK+VKDLV+LL+ET
Sbjct: 583 MERIMKAQALRDSSMAGYMSSKKTMEINPENAIMEELRKRADADKNDKSVKDLVLLLFET 642
Query: 436 ALLSSGFTLDEPQVHASRIYRMIKLGLGIDEDEPIQVEEPASGDVPPLEGDADDASRMEE 257
ALL+SGF+LD+P SRI+RM+KLGL IDEDE + A D+PPLE DA + S+MEE
Sbjct: 643 ALLTSGFSLDDPNTFGSRIHRMLKLGLSIDEDETAE----ADTDMPPLEDDAGE-SKMEE 697
Query: 256 VD 251
VD
Sbjct: 698 VD 699
>09_04_0546 - 18460309-18461859,18462593-18463015,18463415-18463540
Length = 699
Score = 155 bits (375), Expect = 4e-38
Identities = 76/122 (62%), Positives = 101/122 (82%)
Frame = -3
Query: 616 MXRIMKAQALRDTSTMGYMAAKKHLEINPDHSIVETLRQKAEADKNDKAVKDLVILLYET 437
M RIMKAQALRD+S GYM++KK +EINP++SI++ LR++A+ADKNDK+VKDLV+LL+ET
Sbjct: 583 MERIMKAQALRDSSMAGYMSSKKTMEINPENSIMDELRKRADADKNDKSVKDLVMLLFET 642
Query: 436 ALLSSGFTLDEPQVHASRIYRMIKLGLGIDEDEPIQVEEPASGDVPPLEGDADDASRMEE 257
ALL+SGF+L++P +RI+RM+KLGL IDEDE + A D+PPLE DA + S+MEE
Sbjct: 643 ALLTSGFSLEDPNTFGTRIHRMLKLGLSIDEDESAE----ADADMPPLEDDAGE-SKMEE 697
Query: 256 VD 251
VD
Sbjct: 698 VD 699
>09_04_0550 - 18481095-18481496,18482623-18483898,18485769-18485821
Length = 576
Score = 151 bits (366), Expect = 4e-37
Identities = 74/121 (61%), Positives = 100/121 (82%)
Frame = -3
Query: 616 MXRIMKAQALRDTSTMGYMAAKKHLEINPDHSIVETLRQKAEADKNDKAVKDLVILLYET 437
M RIMKAQALRD+S GYM++KK +EINP+++I++ LR++A+ADKNDK+VKDLV+LL+ET
Sbjct: 329 MERIMKAQALRDSSMAGYMSSKKTMEINPENAIMDELRKRADADKNDKSVKDLVMLLFET 388
Query: 436 ALLSSGFTLDEPQVHASRIYRMIKLGLGIDEDEPIQVEEPASGDVPPLEGDADDASRMEE 257
ALL+SGF+L++P +RI+RM+KLGL IDEDE + A D+PPLE DA + S+MEE
Sbjct: 389 ALLTSGFSLEDPNTFGTRIHRMLKLGLSIDEDESAE----ADADMPPLEDDAGE-SKMEE 443
Query: 256 V 254
V
Sbjct: 444 V 444
>09_04_0548 -
18469636-18470037,18471164-18472705,18474052-18474474,
18474874-18474999
Length = 830
Score = 151 bits (366), Expect = 4e-37
Identities = 74/121 (61%), Positives = 100/121 (82%)
Frame = -3
Query: 616 MXRIMKAQALRDTSTMGYMAAKKHLEINPDHSIVETLRQKAEADKNDKAVKDLVILLYET 437
M RIMKAQALRD+S GYM++KK +EINP+++I++ LR++A+ADKNDK+VKDLV+LL+ET
Sbjct: 583 MERIMKAQALRDSSMAGYMSSKKTMEINPENAIMDELRKRADADKNDKSVKDLVMLLFET 642
Query: 436 ALLSSGFTLDEPQVHASRIYRMIKLGLGIDEDEPIQVEEPASGDVPPLEGDADDASRMEE 257
ALL+SGF+L++P +RI+RM+KLGL IDEDE + A D+PPLE DA + S+MEE
Sbjct: 643 ALLTSGFSLEDPNTFGTRIHRMLKLGLSIDEDESAE----ADADMPPLEDDAGE-SKMEE 697
Query: 256 V 254
V
Sbjct: 698 V 698
>04_01_0042 + 473912-474058,474208-474349,474442-476264
Length = 703
Score = 146 bits (354), Expect = 1e-35
Identities = 70/122 (57%), Positives = 98/122 (80%)
Frame = -3
Query: 616 MXRIMKAQALRDTSTMGYMAAKKHLEINPDHSIVETLRQKAEADKNDKAVKDLVILLYET 437
M RIMKAQALRD+S YM++KK +EINP++ I+E LR++A+AD NDK+V+DLV+LL+ET
Sbjct: 584 MERIMKAQALRDSSMGAYMSSKKTMEINPENGIMEELRKRADADANDKSVRDLVLLLFET 643
Query: 436 ALLSSGFTLDEPQVHASRIYRMIKLGLGIDEDEPIQVEEPASGDVPPLEGDADDASRMEE 257
ALL+SGF+LD+P A+RI+RM+KLGL ID+D+ ++ A D+P L+ A + S+MEE
Sbjct: 644 ALLTSGFSLDDPNTFAARIHRMLKLGLNIDDDDAAAADDDA--DMPALDDAAAEESKMEE 701
Query: 256 VD 251
VD
Sbjct: 702 VD 703
>06_03_1404 - 29928792-29929040,29929147-29929551,29930130-29930280,
29930363-29930501,29930578-29930743,29930826-29931041,
29931142-29931323,29931412-29931538,29931974-29932112,
29932227-29932353,29932501-29932612,29932704-29932784,
29933330-29933483,29933569-29933689,29934003-29934045,
29934356-29934460
Length = 838
Score = 88.6 bits (210), Expect = 3e-18
Identities = 45/120 (37%), Positives = 70/120 (58%)
Frame = -3
Query: 616 MXRIMKAQALRDTSTMGYMAAKKHLEINPDHSIVETLRQKAEADKNDKAVKDLVILLYET 437
M +IM++Q L D S YM K+ LEINP H I++ LR K D +++K L+Y+T
Sbjct: 711 MEKIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRDKVAQDSESESLKQTAKLVYQT 770
Query: 436 ALLSSGFTLDEPQVHASRIYRMIKLGLGIDEDEPIQVEEPASGDVPPLEGDADDASRMEE 257
AL+ SGF L +P+ AS IYR ++ L + D ++ EE +V E + ++S ++E
Sbjct: 771 ALMESGFNLPDPKDFASSIYRSVQKSLDLSPDAAVEEEE----EVEEAEVEEKESSNIKE 826
>09_04_0497 - 18096299-18096496,18096586-18096675,18096809-18096914,
18097005-18097179,18097263-18097365,18097458-18097712,
18097791-18097868,18097986-18098078,18098179-18098319,
18098406-18098510,18098658-18098738,18098825-18098866,
18098966-18099082,18099208-18099351,18099485-18099568,
18099683-18099803,18099863-18099988,18100106-18100179,
18100388-18100657
Length = 800
Score = 84.2 bits (199), Expect = 7e-17
Identities = 49/124 (39%), Positives = 66/124 (53%), Gaps = 3/124 (2%)
Frame = -3
Query: 616 MXRIMKAQALRDTSTMGYMAAKKHLEINPDHSIVETLRQKAEADKNDKAVKDLVILLYET 437
M R+MKAQ L DTS++ +M ++ EINPDH IV+ L + + K V LLYET
Sbjct: 668 MERLMKAQTLGDTSSLEFMRGRRIFEINPDHPIVKDLSAACKNEPESTEAKRAVELLYET 727
Query: 436 ALLSSGFTLDEPQVHASRIYRMIKLGLGIDEDEPIQVEEPASG---DVPPLEGDADDASR 266
AL+SSG+T D P +IY M+ + LG P + E S +V EG A +
Sbjct: 728 ALISSGYTPDSPAELGGKIYEMMTIALGGRWGRPEESEAATSESNVEVESSEGSATEVVE 787
Query: 265 MEEV 254
EV
Sbjct: 788 PSEV 791
>08_02_1073 - 24117834-24118037,24118122-24118211,24118299-24118404,
24118477-24118648,24118737-24118839,24118927-24119181,
24119259-24119336,24119449-24119541,24119660-24119800,
24119882-24119986,24120135-24120212,24120297-24120341,
24120463-24120579,24120685-24120828,24120934-24121017,
24121139-24121232,24121322-24121447,24121585-24121658,
24121870-24122098,24123124-24123611,24123702-24123749,
24123841-24124077,24124368-24124404,24125011-24125018
Length = 1051
Score = 81.8 bits (193), Expect = 4e-16
Identities = 40/88 (45%), Positives = 54/88 (61%)
Frame = -3
Query: 616 MXRIMKAQALRDTSTMGYMAAKKHLEINPDHSIVETLRQKAEADKNDKAVKDLVILLYET 437
M R+MKAQ L DTS++ +M ++ EINPDH IV+ L + + K V LLYET
Sbjct: 917 MERLMKAQTLGDTSSLEFMRGRRIFEINPDHPIVKDLNAACKNEPESTEAKRAVELLYET 976
Query: 436 ALLSSGFTLDEPQVHASRIYRMIKLGLG 353
AL+SSG+T D P +IY M+ + LG
Sbjct: 977 ALISSGYTPDSPAELGGKIYEMMTIALG 1004
>12_02_0522 - 19960092-19960595,19962737-19962880,19963042-19963131,
19963215-19963320,19963400-19963574,19963849-19963951,
19964382-19964636,19964726-19964803,19964908-19965000,
19965091-19965222,19965898-19966002,19966127-19966201,
19966284-19966340,19966419-19966532,19966613-19966756,
19966886-19966969,19967071-19967164,19967244-19967369,
19967507-19967580,19967672-19967875,19968234-19968388,
19968860-19968947,19969505-19969730,19970235-19970286,
19970766-19970958,19973221-19973314,19973744-19973788,
19974874-19974896
Length = 1210
Score = 72.9 bits (171), Expect = 2e-13
Identities = 32/87 (36%), Positives = 55/87 (63%)
Frame = -3
Query: 616 MXRIMKAQALRDTSTMGYMAAKKHLEINPDHSIVETLRQKAEADKNDKAVKDLVILLYET 437
M R+M+AQ++ D S++ +M ++K EINP+H I++ L A+ +D V +L+ET
Sbjct: 928 MERLMRAQSMGDMSSLDFMRSRKVFEINPEHEIIKGLNAACRANPDDPEALKAVDILFET 987
Query: 436 ALLSSGFTLDEPQVHASRIYRMIKLGL 356
+++SSGFT D P + +IY M+ +
Sbjct: 988 SMISSGFTPDNPAELSGKIYEMMSTAM 1014
>05_07_0128 +
27879969-27880143,27880232-27881323,27883562-27883698,
27884179-27884409,27884707-27884730
Length = 552
Score = 29.9 bits (64), Expect = 1.7
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +1
Query: 253 QLPPCEMHHQHHPPMAARLQKQALQPESAHL 345
QLP C++++ HP AR + PES+ L
Sbjct: 222 QLPACQLYYHSHPTPLARDDQLITSPESSSL 252
>01_01_0645 +
4890647-4890682,4891684-4891929,4892021-4892317,
4892407-4892574,4892674-4892841,4892924-4893004,
4893105-4893171,4893657-4893751,4894027-4894099,
4894177-4894247,4894325-4894374,4895263-4895375,
4895461-4895513
Length = 505
Score = 29.9 bits (64), Expect = 1.7
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = -3
Query: 376 RMIKLGLGIDEDEPIQVEEPASGDVPPLEGDADDAS 269
R++ G+D DE + + EP D+P + G A S
Sbjct: 256 RIVLAATGVDHDELVSIAEPLLSDMPGVTGPAKPKS 291
>12_01_0179 -
1319291-1319332,1319884-1320579,1322759-1323207,
1323291-1324903,1324991-1325077,1326983-1327251
Length = 1051
Score = 28.7 bits (61), Expect = 3.9
Identities = 24/75 (32%), Positives = 35/75 (46%)
Frame = -3
Query: 478 DKAVKDLVILLYETALLSSGFTLDEPQVHASRIYRMIKLGLGIDEDEPIQVEEPASGDVP 299
D ++ D++ +L E L +D H S + R L D+DE EE AS D
Sbjct: 344 DASMTDIIPMLEELHPL-----IDLQTGHPSLVSRD-NLNTSSDDDEDDLEEEDASTDEN 397
Query: 298 PLEGDADDASRMEEV 254
LEG DD + ++V
Sbjct: 398 QLEGKIDDFANWKDV 412
>11_06_0325 +
22376195-22377001,22377136-22377525,22377638-22377778,
22377888-22378067,22378268-22378447,22378536-22378637,
22378768-22378896,22379318-22379422,22379528-22379623
Length = 709
Score = 28.7 bits (61), Expect = 3.9
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = +1
Query: 34 KVAYITXSNKTKIQYCKYSGTIMTLL*KKSTENHFD 141
KV +++ K ++ +CK+ T TLL NH D
Sbjct: 557 KVQFLSGGEKARLAFCKFLVTPSTLLILDEPTNHLD 592
>11_01_0179 - 1412391-1412863,1412947-1413412,1413504-1414551,
1414639-1414725,1416244-1416411,1416785-1416958,
1417662-1417720,1418132-1420154,1420549-1420647,
1420998-1421796,1422101-1422120,1422446-1422513
Length = 1827
Score = 28.7 bits (61), Expect = 3.9
Identities = 24/75 (32%), Positives = 35/75 (46%)
Frame = -3
Query: 478 DKAVKDLVILLYETALLSSGFTLDEPQVHASRIYRMIKLGLGIDEDEPIQVEEPASGDVP 299
D ++ D++ +L E L +D H S + R L D+DE EE AS D
Sbjct: 1391 DASMTDIIPMLEELHPL-----IDLQTGHPSLVSRD-NLNTSSDDDEDDLEEEDASTDEN 1444
Query: 298 PLEGDADDASRMEEV 254
LEG DD + ++V
Sbjct: 1445 QLEGKIDDFANWKDV 1459
>05_01_0300 + 2340251-2340791,2340892-2341325
Length = 324
Score = 28.7 bits (61), Expect = 3.9
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = +1
Query: 265 CEMHHQHHPPMAARLQKQAL 324
CEM QHHP A RL K+ +
Sbjct: 28 CEMTRQHHPQCARRLPKRII 47
>08_01_0835 +
8147177-8147359,8147871-8147968,8148045-8148102,
8148192-8148271,8148770-8148872,8148966-8149181
Length = 245
Score = 28.3 bits (60), Expect = 5.2
Identities = 17/51 (33%), Positives = 28/51 (54%)
Frame = +2
Query: 335 RLIFINTKTQFDHSIDTGSMDLGLIKREARRQQGSFIQ*DNKILNSFVILV 487
+LIF K Q+ D +L +KREAR + G ++ + K+L FV+ +
Sbjct: 45 KLIFARAK-QYAQEYDAQEKELVQLKREARMKGGFYVSPEAKLL--FVVRI 92
>03_02_0004 - 4869853-4871106
Length = 417
Score = 28.3 bits (60), Expect = 5.2
Identities = 18/57 (31%), Positives = 25/57 (43%)
Frame = +2
Query: 152 NNGIFELNQSLAVHRCTKTNHYDMVPTVKVEILINFLHARCIISITLQWRHVSRSRL 322
N G++ S +H T+ D+ V+IL A S TLQW H S + L
Sbjct: 184 NRGLYVQGYSPTIH---PTDASDLASHATVDILTTATEASPTASATLQWTHGSLNAL 237
>01_06_0747 -
31645136-31646521,31647870-31648142,31649080-31649148,
31649486-31649614
Length = 618
Score = 28.3 bits (60), Expect = 5.2
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +1
Query: 253 QLPPCEMHHQHHPPMAARLQKQALQPESAHLHQYQ 357
QLPP M Q HPP+ +++ Q P H +Q
Sbjct: 407 QLPPQAMQPQQHPPVQNQMRPQT-PPNYPHYQPHQ 440
>12_01_0357 +
2720860-2721066,2721169-2721384,2721481-2723608,
2723699-2724124,2724242-2724546,2724660-2724823,
2724899-2724980
Length = 1175
Score = 27.9 bits (59), Expect = 6.8
Identities = 11/37 (29%), Positives = 17/37 (45%)
Frame = +1
Query: 253 QLPPCEMHHQHHPPMAARLQKQALQPESAHLHQYQDP 363
Q P + Q HPP+ + Q Q +Q + +Q P
Sbjct: 330 QAPAAQSQSQQHPPLQSAAQTQIVQAQPQSQVSFQQP 366
Score = 27.9 bits (59), Expect = 6.8
Identities = 19/57 (33%), Positives = 24/57 (42%), Gaps = 2/57 (3%)
Frame = +1
Query: 199 HKNKPL*HGSYS*SRDLNQLPPCEM--HHQHHPPMAARLQKQALQPESAHLHQYQDP 363
H P GS + Q P E+ H Q H P ++ Q QP+ HL Q Q P
Sbjct: 375 HTPVPTQLGSQPFAMPPTQATPSEVQPHVQPHIPQHHQVMAQQQQPQLQHLPQQQHP 431
>07_03_1265 +
25304408-25304545,25304895-25305032,25305746-25305807,
25306321-25306423,25306560-25306636,25306915-25306971,
25307202-25307323,25307551-25307667,25308188-25308273,
25308387-25308560,25308671-25308940
Length = 447
Score = 27.9 bits (59), Expect = 6.8
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +1
Query: 259 PPCEMHHQHHPPMAARLQKQ 318
PP +HH HHP +AA +Q
Sbjct: 26 PPPPLHHHHHPLLAAAPPQQ 45
>04_01_0063 - 630345-633743
Length = 1132
Score = 27.9 bits (59), Expect = 6.8
Identities = 27/110 (24%), Positives = 50/110 (45%), Gaps = 14/110 (12%)
Frame = +2
Query: 155 NGIFELNQSLAVHRCTKTNHYDMVPTVKVEI----LINFLHARCIISI--TLQWRHVSRS 316
NGIF Q L + RC +H + + V + L+ F + + + TL+ H+ +
Sbjct: 762 NGIFTNLQDLQLCRCYNLDHLPEIGKLFVSLRQLKLVVFPKLKRMPRLPGTLKNLHIQQC 821
Query: 317 RLF--------NLNRLIFINTKTQFDHSIDTGSMDLGLIKREARRQQGSF 442
+ N+ R +F+ T TQ + S++ + ++ I+R A Q F
Sbjct: 822 KALVMTCSEDVNMIRSLFVETATQIEPSLNITATEVAEIERFAGEQPDRF 871
>06_01_0243 -
1837830-1837886,1837969-1838016,1838113-1838255,
1838784-1838982,1839085-1839265,1839857-1840228,
1841453-1841658
Length = 401
Score = 27.5 bits (58), Expect = 9.0
Identities = 16/31 (51%), Positives = 21/31 (67%)
Frame = -3
Query: 409 DEPQVHASRIYRMIKLGLGIDEDEPIQVEEP 317
+E +V ASRI RMI+ GL D DEP + +P
Sbjct: 369 EEEEVKASRIRRMIE-GLD-DSDEPEDIFDP 397
>05_06_0132 +
25893241-25893435,25894266-25894487,25894567-25894863,
25894944-25895111,25895201-25895368,25895456-25895536,
25895704-25895770,25895874-25895971,25896587-25896659,
25896753-25896823,25896919-25896968,25897698-25897810,
25898182-25898300,25898629-25898721,25899025-25899051,
25899422-25899823,25900467-25900513,25900612-25900651,
25900733-25900795,25900881-25901018,25901873-25902031,
25902111-25902164,25902324-25902392,25902514-25902643,
25902909-25902949,25903133-25903178,25903200-25903357,
25903560-25903605,25903702-25903853,25904022-25904243
Length = 1202
Score = 27.5 bits (58), Expect = 9.0
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = -3
Query: 376 RMIKLGLGIDEDEPIQVEEPASGDVPPLE 290
RM+ GI+ DE + V EP D+P ++
Sbjct: 301 RMVLAASGIEHDELVSVAEPLLSDLPSVK 329
>02_04_0486 - 23351960-23353093
Length = 377
Score = 27.5 bits (58), Expect = 9.0
Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 3/60 (5%)
Frame = -1
Query: 360 VLVLMKMSRFRLKSLLLETCRHWR-VMLMMHLAWRKLIKISTLTVGTMS*WFV--FVHRC 190
VLVL ++ S L TCRHWR + + AW + +S +G + + + HRC
Sbjct: 23 VLVLDRLGWSTHPSFAL-TCRHWRSAVSPFYPAWITPLLLSAADIGVTNVRYYSPYYHRC 81
>02_04_0483 - 23305492-23306625
Length = 377
Score = 27.5 bits (58), Expect = 9.0
Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 3/60 (5%)
Frame = -1
Query: 360 VLVLMKMSRFRLKSLLLETCRHWR-VMLMMHLAWRKLIKISTLTVGTMS*WFV--FVHRC 190
VLVL ++ S L TCRHWR + + AW + +S +G + + + HRC
Sbjct: 23 VLVLDRLGWSTHPSFAL-TCRHWRSAVSPFYPAWITPLLLSAADIGVTNVRYYSPYYHRC 81
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,219,979
Number of Sequences: 37544
Number of extensions: 332795
Number of successful extensions: 1001
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 946
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 987
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1490248872
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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