Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_pT_C22
         (618 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY536865-1|AAT07965.1|  650|Anopheles gambiae tryptophan transpo...    25   2.0  
AY146748-1|AAO12063.1|  279|Anopheles gambiae odorant-binding pr...    25   2.0  
AJ626713-1|CAF25029.1|  650|Anopheles gambiae tryptophan transpo...    25   2.0  
AB090823-1|BAC57921.1|  429|Anopheles gambiae gag-like protein p...    25   2.0  
AY645021-1|AAT92557.1|  163|Anopheles gambiae even-skipped protein.    24   4.5  
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    24   4.5  
AJ439353-4|CAD27926.1|  338|Anopheles gambiae putative hox prote...    24   4.5  
AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcript...    24   4.5  
EF990672-1|ABS30733.1|  466|Anopheles gambiae voltage-gated calc...    23   7.9  
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    23   7.9  

>AY536865-1|AAT07965.1|  650|Anopheles gambiae tryptophan
           transporter protein.
          Length = 650

 Score = 25.0 bits (52), Expect = 2.0
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = -1

Query: 591 LYVTHPQWDTWLRRSIWKSILITQLW 514
           LY   PQWD  L   +W +  +TQ++
Sbjct: 305 LYFIKPQWDRILEAKVWYA-AVTQVF 329


>AY146748-1|AAO12063.1|  279|Anopheles gambiae odorant-binding
           protein AgamOBP41 protein.
          Length = 279

 Score = 25.0 bits (52), Expect = 2.0
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = -1

Query: 96  CARILTILYLCFVTVRNV 43
           C R   +LY CF  VRNV
Sbjct: 250 CKRAYHLLYKCFENVRNV 267


>AJ626713-1|CAF25029.1|  650|Anopheles gambiae tryptophan
           transporter protein.
          Length = 650

 Score = 25.0 bits (52), Expect = 2.0
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = -1

Query: 591 LYVTHPQWDTWLRRSIWKSILITQLW 514
           LY   PQWD  L   +W +  +TQ++
Sbjct: 305 LYFIKPQWDRILEAKVWYA-AVTQVF 329


>AB090823-1|BAC57921.1|  429|Anopheles gambiae gag-like protein
           protein.
          Length = 429

 Score = 25.0 bits (52), Expect = 2.0
 Identities = 11/33 (33%), Positives = 15/33 (45%)
 Frame = +1

Query: 268 EMHHQHHPPMAARLQKQALQPESAHLHQYQDPV 366
           +   Q H  +    Q++ LQPE  H  Q Q  V
Sbjct: 161 QQQSQSHRQVVIGTQQECLQPEQQHQRQQQHTV 193


>AY645021-1|AAT92557.1|  163|Anopheles gambiae even-skipped protein.
          Length = 163

 Score = 23.8 bits (49), Expect = 4.5
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +1

Query: 268 EMHHQHHPPMAARLQKQALQPES 336
           ++HHQ H P+A+     +L P S
Sbjct: 72  QLHHQGHSPVASPHSALSLSPVS 94


>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
          Length = 1201

 Score = 23.8 bits (49), Expect = 4.5
 Identities = 13/40 (32%), Positives = 22/40 (55%)
 Frame = -3

Query: 523 SIVETLRQKAEADKNDKAVKDLVILLYETALLSSGFTLDE 404
           ++ E   + +E  K DKA + L  ++YET L  +   L+E
Sbjct: 202 TLEEEKEELSEYQKWDKARRTLEYVIYETELKETRKQLEE 241


>AJ439353-4|CAD27926.1|  338|Anopheles gambiae putative hox protein
           protein.
          Length = 338

 Score = 23.8 bits (49), Expect = 4.5
 Identities = 9/24 (37%), Positives = 14/24 (58%), Gaps = 2/24 (8%)
 Frame = +1

Query: 550 SSQPCIPLWMCHVEPE--PS*YVP 615
           ++QP +P W   ++PE  P  Y P
Sbjct: 87  TNQPIVPFWQADLKPELSPKLYQP 110


>AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1009

 Score = 23.8 bits (49), Expect = 4.5
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = +1

Query: 274 HHQHHPPMAARLQKQALQPESAHLHQYQDP 363
           H+Q+H   A +L  Q ++ ESA +    DP
Sbjct: 7   HNQNHSYAAFQLMWQTIREESADIVLIADP 36


>EF990672-1|ABS30733.1|  466|Anopheles gambiae voltage-gated calcium
           channel beta subunitprotein.
          Length = 466

 Score = 23.0 bits (47), Expect = 7.9
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -3

Query: 322 EPASGDVPPLEGDADDA 272
           EP+ G  PP  GD  D+
Sbjct: 185 EPSRGSTPPTPGDDSDS 201


>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 23.0 bits (47), Expect = 7.9
 Identities = 11/29 (37%), Positives = 18/29 (62%)
 Frame = -3

Query: 427 SSGFTLDEPQVHASRIYRMIKLGLGIDED 341
           SS +T+D  +VH   + +++K   GID D
Sbjct: 182 SSYYTIDNKRVHFKEVSKLLKQH-GIDLD 209


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 636,644
Number of Sequences: 2352
Number of extensions: 12124
Number of successful extensions: 40
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 60553008
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)