Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P28_pT_C22
(618 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z75530-3|CAA99793.1| 702|Caenorhabditis elegans Hypothetical pr... 174 4e-44
Z68751-3|CAA92973.1| 760|Caenorhabditis elegans Hypothetical pr... 67 8e-12
Z68296-5|CAD59142.2| 1677|Caenorhabditis elegans Hypothetical pr... 30 1.2
Z68296-4|CAA92591.3| 1838|Caenorhabditis elegans Hypothetical pr... 30 1.2
Z68108-2|CAA92135.1| 406|Caenorhabditis elegans Hypothetical pr... 30 1.5
AC024775-2|AAK68456.1| 452|Caenorhabditis elegans Hypothetical ... 29 2.0
Z92822-7|CAH10786.1| 601|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z83244-9|CAH10804.1| 601|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z83244-1|CAB05827.2| 634|Caenorhabditis elegans Hypothetical pr... 29 2.7
AF145376-1|AAD39815.1| 634|Caenorhabditis elegans LIT-1 protein. 29 2.7
AF078792-2|AAC26946.1| 512|Caenorhabditis elegans Hypothetical ... 29 2.7
Z47356-5|CAA87418.1| 173|Caenorhabditis elegans Hypothetical pr... 28 6.1
AF040642-9|AAB94950.1| 589|Caenorhabditis elegans Hypothetical ... 27 8.1
>Z75530-3|CAA99793.1| 702|Caenorhabditis elegans Hypothetical
protein C47E8.5 protein.
Length = 702
Score = 174 bits (424), Expect = 4e-44
Identities = 87/123 (70%), Positives = 101/123 (82%), Gaps = 1/123 (0%)
Frame = -3
Query: 616 MXRIMKAQALRDTSTMGYMAAKKHLEINPDHSIVETLRQKAEADKNDKAVKDLVILLYET 437
M RIMKAQALRD+STMGYMAAKKHLEINPDH+I++TLR + E DKNDK VKDLV+LL+ET
Sbjct: 580 MERIMKAQALRDSSTMGYMAAKKHLEINPDHAIMKTLRDRVEVDKNDKTVKDLVVLLFET 639
Query: 436 ALLSSGFTLDEPQVHASRIYRMIKLGLGIDEDEPIQVEEPASGDV-PPLEGDADDASRME 260
ALL+SGF+L+EPQ HASRIYRMIKLGL I +DE P+S +EG +DASRME
Sbjct: 640 ALLASGFSLEEPQSHASRIYRMIKLGLDIGDDEIEDSAVPSSCTAEAKIEGAEEDASRME 699
Query: 259 EVD 251
EVD
Sbjct: 700 EVD 702
>Z68751-3|CAA92973.1| 760|Caenorhabditis elegans Hypothetical
protein T05E11.3 protein.
Length = 760
Score = 67.3 bits (157), Expect = 8e-12
Identities = 40/123 (32%), Positives = 64/123 (52%), Gaps = 3/123 (2%)
Frame = -3
Query: 616 MXRIMKAQAL---RDTSTMGYMAAKKHLEINPDHSIVETLRQKAEADKNDKAVKDLVILL 446
M RIMK+QA +D + Y KK EINP H +++ L ++ A + D LL
Sbjct: 635 MERIMKSQAYAKAKDPTQDFYATQKKTFEINPRHPVIKELLKRVTASEEDTTAASTAKLL 694
Query: 445 YETALLSSGFTLDEPQVHASRIYRMIKLGLGIDEDEPIQVEEPASGDVPPLEGDADDASR 266
+ETA L SGF+L + A RI +++ L + +D ++ E+ P E +A + +
Sbjct: 695 FETATLRSGFSLQDQVGFADRIEAVLRQSLDVSQDAQVETEQHIEEAEP--EPEAAEETT 752
Query: 265 MEE 257
+EE
Sbjct: 753 IEE 755
>Z68296-5|CAD59142.2| 1677|Caenorhabditis elegans Hypothetical protein
C46C2.1b protein.
Length = 1677
Score = 30.3 bits (65), Expect = 1.2
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = +1
Query: 241 RDLNQLPPCEMHHQHHPPMAARLQKQALQPES 336
RD PP HHQ HPP LQ P++
Sbjct: 1605 RDNQSAPPRHHHHQPHPPHHPHLQNHYHPPQN 1636
>Z68296-4|CAA92591.3| 1838|Caenorhabditis elegans Hypothetical protein
C46C2.1a protein.
Length = 1838
Score = 30.3 bits (65), Expect = 1.2
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = +1
Query: 241 RDLNQLPPCEMHHQHHPPMAARLQKQALQPES 336
RD PP HHQ HPP LQ P++
Sbjct: 1766 RDNQSAPPRHHHHQPHPPHHPHLQNHYHPPQN 1797
>Z68108-2|CAA92135.1| 406|Caenorhabditis elegans Hypothetical
protein T05A10.3 protein.
Length = 406
Score = 29.9 bits (64), Expect = 1.5
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = -3
Query: 346 EDEPIQVEEPASGDVPPLEGDADDASRMEEVD*D 245
++EP++VEEP V P EGD AS E + D
Sbjct: 182 DEEPVEVEEPV---VEPTEGDEQMASSSEHITKD 212
>AC024775-2|AAK68456.1| 452|Caenorhabditis elegans Hypothetical
protein Y41D4A.6 protein.
Length = 452
Score = 29.5 bits (63), Expect = 2.0
Identities = 14/46 (30%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Frame = -3
Query: 415 TLDEPQVHAS---RIYRMIKLGLGIDEDEPIQVEEPASGDVPPLEG 287
+LD P + A + + +++L GID+++ VE P + LEG
Sbjct: 184 SLDAPSIFAKTAQKCWELLELSKGIDKNDSTSVELPEKAGISSLEG 229
>Z92822-7|CAH10786.1| 601|Caenorhabditis elegans Hypothetical
protein W06F12.1d protein.
Length = 601
Score = 29.1 bits (62), Expect = 2.7
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = +1
Query: 253 QLPPCEMHHQHHPPMAARLQKQALQPESAHLHQ 351
QL HH HH P AA+ A+ P S + Q
Sbjct: 83 QLVAAATHHNHHQPQAAQPHYSAVVPRSDVIQQ 115
>Z83244-9|CAH10804.1| 601|Caenorhabditis elegans Hypothetical
protein W06F12.1d protein.
Length = 601
Score = 29.1 bits (62), Expect = 2.7
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = +1
Query: 253 QLPPCEMHHQHHPPMAARLQKQALQPESAHLHQ 351
QL HH HH P AA+ A+ P S + Q
Sbjct: 83 QLVAAATHHNHHQPQAAQPHYSAVVPRSDVIQQ 115
>Z83244-1|CAB05827.2| 634|Caenorhabditis elegans Hypothetical
protein W06F12.1a protein.
Length = 634
Score = 29.1 bits (62), Expect = 2.7
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = +1
Query: 253 QLPPCEMHHQHHPPMAARLQKQALQPESAHLHQ 351
QL HH HH P AA+ A+ P S + Q
Sbjct: 116 QLVAAATHHNHHQPQAAQPHYSAVVPRSDVIQQ 148
>AF145376-1|AAD39815.1| 634|Caenorhabditis elegans LIT-1 protein.
Length = 634
Score = 29.1 bits (62), Expect = 2.7
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = +1
Query: 253 QLPPCEMHHQHHPPMAARLQKQALQPESAHLHQ 351
QL HH HH P AA+ A+ P S + Q
Sbjct: 116 QLVAAATHHNHHQPQAAQPHYSAVVPRSDVIQQ 148
>AF078792-2|AAC26946.1| 512|Caenorhabditis elegans Hypothetical
protein Y40D12A.2 protein.
Length = 512
Score = 29.1 bits (62), Expect = 2.7
Identities = 17/52 (32%), Positives = 25/52 (48%)
Frame = +1
Query: 172 KSVFGCTPMHKNKPL*HGSYS*SRDLNQLPPCEMHHQHHPPMAARLQKQALQ 327
K + G +P+ KNK Y S D+ P C H H P + + K+AL+
Sbjct: 301 KKIIGESPVLKNKYF----YPPSNDIQGQPDCASHDDHFPYLNSPEVKKALR 348
>Z47356-5|CAA87418.1| 173|Caenorhabditis elegans Hypothetical
protein T15H9.5 protein.
Length = 173
Score = 27.9 bits (59), Expect = 6.1
Identities = 13/50 (26%), Positives = 26/50 (52%)
Frame = -3
Query: 601 KAQALRDTSTMGYMAAKKHLEINPDHSIVETLRQKAEADKNDKAVKDLVI 452
K ++ S + KK + PD + + ++++ +AD N+ VK+L I
Sbjct: 70 KKSPIKVLSEKKLKSKKKEEDKEPDEKVEKDVKKEVKADNNEPLVKNLKI 119
>AF040642-9|AAB94950.1| 589|Caenorhabditis elegans Hypothetical
protein C50D2.2 protein.
Length = 589
Score = 27.5 bits (58), Expect = 8.1
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = -1
Query: 591 LYVTHPQWDTWLRRSIWKSI 532
L + H W TWLR +W SI
Sbjct: 525 LMMVHLAWITWLRLVVWMSI 544
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,000,647
Number of Sequences: 27780
Number of extensions: 289484
Number of successful extensions: 812
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 781
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 810
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1342816466
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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