Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_pT_C19
         (585 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF047661-4|AAC04435.2|  931|Caenorhabditis elegans Hypothetical ...    30   1.4  
Z73102-6|CAA97412.1|  522|Caenorhabditis elegans Hypothetical pr...    28   4.2  
AL021572-2|CAA16518.1|  415|Caenorhabditis elegans Hypothetical ...    28   5.6  
AC024807-1|AAF59529.5|  704|Caenorhabditis elegans Hypothetical ...    28   5.6  
U23181-6|AAC48204.1|  801|Caenorhabditis elegans Hypothetical pr...    27   7.4  

>AF047661-4|AAC04435.2|  931|Caenorhabditis elegans Hypothetical
           protein M70.1 protein.
          Length = 931

 Score = 29.9 bits (64), Expect = 1.4
 Identities = 14/43 (32%), Positives = 19/43 (44%)
 Frame = -2

Query: 521 KKIDLAPTVESDAAAVPEIKTPEAADAPKLADNPVDEDKPADI 393
           KK D  P+       VP   TP+ A  P     P  ++KP D+
Sbjct: 812 KKKDTKPSAPKPKPDVPVNPTPQTAKVPVAPAPPAKDEKPKDV 854


>Z73102-6|CAA97412.1|  522|Caenorhabditis elegans Hypothetical
           protein B0035.5 protein.
          Length = 522

 Score = 28.3 bits (60), Expect = 4.2
 Identities = 18/62 (29%), Positives = 26/62 (41%), Gaps = 1/62 (1%)
 Frame = -2

Query: 584 KPSATDAEGSADSAAIIPNMVKKIDLAPTVESDAAAVPEIKTPEAADAPKLADN-PVDED 408
           KP++ +AE   D    +    K ++L   V     A PE   PEA+   K   + P D  
Sbjct: 281 KPASLNAEDIRDEKVKVLKAAKVVELKDVVVGQYIASPEFDHPEASQGYKDDKSVPADST 340

Query: 407 KP 402
            P
Sbjct: 341 TP 342


>AL021572-2|CAA16518.1|  415|Caenorhabditis elegans Hypothetical
           protein W06H3.2 protein.
          Length = 415

 Score = 27.9 bits (59), Expect = 5.6
 Identities = 16/48 (33%), Positives = 24/48 (50%)
 Frame = -2

Query: 557 SADSAAIIPNMVKKIDLAPTVESDAAAVPEIKTPEAADAPKLADNPVD 414
           +A++ A  P     + +A    S AA   +   PEA DAPK A+ P +
Sbjct: 356 TANAEAEEPEKKTFVTMAAACASKAAKEQDGVAPEAQDAPKEAEAPAE 403


>AC024807-1|AAF59529.5|  704|Caenorhabditis elegans Hypothetical
           protein Y53G8AL.1 protein.
          Length = 704

 Score = 27.9 bits (59), Expect = 5.6
 Identities = 14/44 (31%), Positives = 24/44 (54%)
 Frame = -2

Query: 524 VKKIDLAPTVESDAAAVPEIKTPEAADAPKLADNPVDEDKPADI 393
           V  +DL  T E+    +PEI TP   D+ +  +N V+  + ++I
Sbjct: 289 VPSLDLEETTENPE--IPEISTPREEDSAENLENLVENSEKSEI 330


>U23181-6|AAC48204.1|  801|Caenorhabditis elegans Hypothetical
           protein ZK84.1 protein.
          Length = 801

 Score = 27.5 bits (58), Expect = 7.4
 Identities = 17/61 (27%), Positives = 27/61 (44%), Gaps = 1/61 (1%)
 Frame = -2

Query: 572 TDAEGSADSAAIIPNMVKKIDLAPTVESDAAAVPEIKTPEAADAP-KLADNPVDEDKPAD 396
           TD+  SAD+ A + +       A + E+ A  +   +T  A   P  +AD     D P+ 
Sbjct: 334 TDSAASADTTAALVDTSSSEHAAESTEAPATDIAATETTPAPSVPAPVADAAAGYDSPSS 393

Query: 395 I 393
           I
Sbjct: 394 I 394


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,100,962
Number of Sequences: 27780
Number of extensions: 135327
Number of successful extensions: 417
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 396
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 416
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1226509528
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)