Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P28_pT_C17
(494 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82083-1|CAB04967.1| 128|Caenorhabditis elegans Hypothetical pr... 219 1e-57
L31492-1|AAC37252.1| 128|Caenorhabditis elegans ubiquitin/ribos... 219 1e-57
U23172-1|AAC46525.1| 838|Caenorhabditis elegans Ubiquitin prote... 142 9e-35
U23172-2|AAM22069.2| 538|Caenorhabditis elegans Ubiquitin prote... 141 2e-34
M23433-1|AAA28154.1| 838|Caenorhabditis elegans polyubiquitin p... 141 2e-34
Z78420-1|CAB01708.1| 77|Caenorhabditis elegans Hypothetical pr... 93 1e-19
AF040645-8|AAB94982.1| 292|Caenorhabditis elegans Hypothetical ... 82 2e-16
M21321-1|AAA28153.1| 37|Caenorhabditis elegans protein ( C.ele... 62 2e-10
L16530-1|AAA28161.1| 163|Caenorhabditis elegans ubiquitin-like:... 60 7e-10
AC006651-4|AAF39865.1| 163|Caenorhabditis elegans Ubiquitin-lik... 60 7e-10
U80452-4|AAB37860.1| 226|Caenorhabditis elegans Hypothetical pr... 51 4e-07
AF040645-9|AAB94972.2| 197|Caenorhabditis elegans Hypothetical ... 46 1e-05
AF040643-4|AAB94965.1| 110|Caenorhabditis elegans Hypothetical ... 44 5e-05
U80452-8|AAB37855.1| 244|Caenorhabditis elegans Hypothetical pr... 43 1e-04
U09415-1|AAA82164.1| 655|Caenorhabditis elegans Ceprp21 protein. 42 2e-04
AF106576-5|AAC78179.1| 655|Caenorhabditis elegans Yeast prp (sp... 42 2e-04
U80452-6|AAB37858.1| 592|Caenorhabditis elegans Hypothetical pr... 40 7e-04
AC006651-5|AAM48542.1| 47|Caenorhabditis elegans Ubiquitin-lik... 40 0.001
U80452-7|AAB37856.1| 233|Caenorhabditis elegans Hypothetical pr... 39 0.002
U80452-10|AAB37853.1| 214|Caenorhabditis elegans Hypothetical p... 35 0.037
AF099917-6|AAC68780.1| 264|Caenorhabditis elegans Hypothetical ... 34 0.049
Z81568-9|CAB04599.2| 386|Caenorhabditis elegans Hypothetical pr... 33 0.11
Z80215-7|CAB02274.1| 674|Caenorhabditis elegans Hypothetical pr... 29 1.4
U80452-5|AAB37859.1| 180|Caenorhabditis elegans Hypothetical pr... 29 2.4
U00054-3|AAM48546.1| 12268|Caenorhabditis elegans Hypothetical p... 27 5.7
U00054-2|AAA50715.2| 13100|Caenorhabditis elegans Hypothetical p... 27 5.7
AY117398-1|AAM78593.1| 13100|Caenorhabditis elegans mesocentin p... 27 5.7
Z50755-4|CAA90634.1| 369|Caenorhabditis elegans Hypothetical pr... 27 7.5
U41994-13|AAK31527.2| 1425|Caenorhabditis elegans Neuronal symme... 27 7.5
AF003130-4|AAB54126.1| 1043|Caenorhabditis elegans Hypothetical ... 27 9.9
>Z82083-1|CAB04967.1| 128|Caenorhabditis elegans Hypothetical
protein ZK1010.1 protein.
Length = 128
Score = 219 bits (534), Expect = 1e-57
Identities = 103/117 (88%), Positives = 108/117 (92%)
Frame = -2
Query: 433 KPLXGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 254
K L GKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES
Sbjct: 6 KTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 65
Query: 253 TLHLVLRLRGGTIEPSLRILAMKYNCEKMICRKCYARLHPRATDCRKTKCGHTNNLR 83
TLHLVLRLRGG IEPSLR LA KYNC+K ICRKCYARL PRA++CRK KCGH++ LR
Sbjct: 66 TLHLVLRLRGGIIEPSLRQLAQKYNCDKQICRKCYARLPPRASNCRKKKCGHSSELR 122
>L31492-1|AAC37252.1| 128|Caenorhabditis elegans
ubiquitin/ribosomal fusion protein protein.
Length = 128
Score = 219 bits (534), Expect = 1e-57
Identities = 103/117 (88%), Positives = 108/117 (92%)
Frame = -2
Query: 433 KPLXGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 254
K L GKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES
Sbjct: 6 KTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 65
Query: 253 TLHLVLRLRGGTIEPSLRILAMKYNCEKMICRKCYARLHPRATDCRKTKCGHTNNLR 83
TLHLVLRLRGG IEPSLR LA KYNC+K ICRKCYARL PRA++CRK KCGH++ LR
Sbjct: 66 TLHLVLRLRGGIIEPSLRQLAQKYNCDKQICRKCYARLPPRASNCRKKKCGHSSELR 122
>U23172-1|AAC46525.1| 838|Caenorhabditis elegans Ubiquitin protein
1, isoform a protein.
Length = 838
Score = 142 bits (345), Expect = 9e-35
Identities = 70/73 (95%), Positives = 70/73 (95%)
Frame = -2
Query: 433 KPLXGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 254
K L GKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES
Sbjct: 766 KTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 825
Query: 253 TLHLVLRLRGGTI 215
TLHLVLRLRGG I
Sbjct: 826 TLHLVLRLRGGDI 838
Score = 141 bits (342), Expect = 2e-34
Identities = 69/71 (97%), Positives = 69/71 (97%)
Frame = -2
Query: 433 KPLXGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 254
K L GKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES
Sbjct: 6 KTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 65
Query: 253 TLHLVLRLRGG 221
TLHLVLRLRGG
Sbjct: 66 TLHLVLRLRGG 76
Score = 141 bits (342), Expect = 2e-34
Identities = 69/71 (97%), Positives = 69/71 (97%)
Frame = -2
Query: 433 KPLXGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 254
K L GKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES
Sbjct: 82 KTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 141
Query: 253 TLHLVLRLRGG 221
TLHLVLRLRGG
Sbjct: 142 TLHLVLRLRGG 152
Score = 141 bits (342), Expect = 2e-34
Identities = 69/71 (97%), Positives = 69/71 (97%)
Frame = -2
Query: 433 KPLXGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 254
K L GKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES
Sbjct: 158 KTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 217
Query: 253 TLHLVLRLRGG 221
TLHLVLRLRGG
Sbjct: 218 TLHLVLRLRGG 228
Score = 141 bits (342), Expect = 2e-34
Identities = 69/71 (97%), Positives = 69/71 (97%)
Frame = -2
Query: 433 KPLXGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 254
K L GKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES
Sbjct: 234 KTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 293
Query: 253 TLHLVLRLRGG 221
TLHLVLRLRGG
Sbjct: 294 TLHLVLRLRGG 304
Score = 141 bits (342), Expect = 2e-34
Identities = 69/71 (97%), Positives = 69/71 (97%)
Frame = -2
Query: 433 KPLXGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 254
K L GKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES
Sbjct: 310 KTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 369
Query: 253 TLHLVLRLRGG 221
TLHLVLRLRGG
Sbjct: 370 TLHLVLRLRGG 380
Score = 141 bits (342), Expect = 2e-34
Identities = 69/71 (97%), Positives = 69/71 (97%)
Frame = -2
Query: 433 KPLXGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 254
K L GKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES
Sbjct: 386 KTLIGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 445
Query: 253 TLHLVLRLRGG 221
TLHLVLRLRGG
Sbjct: 446 TLHLVLRLRGG 456
Score = 141 bits (342), Expect = 2e-34
Identities = 69/71 (97%), Positives = 69/71 (97%)
Frame = -2
Query: 433 KPLXGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 254
K L GKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES
Sbjct: 462 KTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 521
Query: 253 TLHLVLRLRGG 221
TLHLVLRLRGG
Sbjct: 522 TLHLVLRLRGG 532
Score = 141 bits (342), Expect = 2e-34
Identities = 69/71 (97%), Positives = 69/71 (97%)
Frame = -2
Query: 433 KPLXGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 254
K L GKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES
Sbjct: 538 KTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 597
Query: 253 TLHLVLRLRGG 221
TLHLVLRLRGG
Sbjct: 598 TLHLVLRLRGG 608
Score = 141 bits (342), Expect = 2e-34
Identities = 69/71 (97%), Positives = 69/71 (97%)
Frame = -2
Query: 433 KPLXGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 254
K L GKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES
Sbjct: 614 KTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 673
Query: 253 TLHLVLRLRGG 221
TLHLVLRLRGG
Sbjct: 674 TLHLVLRLRGG 684
Score = 141 bits (342), Expect = 2e-34
Identities = 69/71 (97%), Positives = 69/71 (97%)
Frame = -2
Query: 433 KPLXGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 254
K L GKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES
Sbjct: 690 KTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 749
Query: 253 TLHLVLRLRGG 221
TLHLVLRLRGG
Sbjct: 750 TLHLVLRLRGG 760
>U23172-2|AAM22069.2| 538|Caenorhabditis elegans Ubiquitin protein
1, isoform c protein.
Length = 538
Score = 141 bits (342), Expect = 2e-34
Identities = 69/71 (97%), Positives = 69/71 (97%)
Frame = -2
Query: 433 KPLXGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 254
K L GKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES
Sbjct: 6 KTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 65
Query: 253 TLHLVLRLRGG 221
TLHLVLRLRGG
Sbjct: 66 TLHLVLRLRGG 76
Score = 141 bits (342), Expect = 2e-34
Identities = 69/71 (97%), Positives = 69/71 (97%)
Frame = -2
Query: 433 KPLXGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 254
K L GKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES
Sbjct: 82 KTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 141
Query: 253 TLHLVLRLRGG 221
TLHLVLRLRGG
Sbjct: 142 TLHLVLRLRGG 152
Score = 141 bits (342), Expect = 2e-34
Identities = 69/71 (97%), Positives = 69/71 (97%)
Frame = -2
Query: 433 KPLXGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 254
K L GKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES
Sbjct: 158 KTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 217
Query: 253 TLHLVLRLRGG 221
TLHLVLRLRGG
Sbjct: 218 TLHLVLRLRGG 228
Score = 141 bits (342), Expect = 2e-34
Identities = 69/71 (97%), Positives = 69/71 (97%)
Frame = -2
Query: 433 KPLXGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 254
K L GKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES
Sbjct: 234 KTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 293
Query: 253 TLHLVLRLRGG 221
TLHLVLRLRGG
Sbjct: 294 TLHLVLRLRGG 304
Score = 141 bits (342), Expect = 2e-34
Identities = 69/71 (97%), Positives = 69/71 (97%)
Frame = -2
Query: 433 KPLXGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 254
K L GKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES
Sbjct: 310 KTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 369
Query: 253 TLHLVLRLRGG 221
TLHLVLRLRGG
Sbjct: 370 TLHLVLRLRGG 380
Score = 141 bits (342), Expect = 2e-34
Identities = 69/71 (97%), Positives = 69/71 (97%)
Frame = -2
Query: 433 KPLXGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 254
K L GKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES
Sbjct: 386 KTLIGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 445
Query: 253 TLHLVLRLRGG 221
TLHLVLRLRGG
Sbjct: 446 TLHLVLRLRGG 456
Score = 83.0 bits (196), Expect = 1e-16
Identities = 40/42 (95%), Positives = 40/42 (95%)
Frame = -2
Query: 433 KPLXGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAG 308
K L GKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAG
Sbjct: 462 KTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAG 503
>M23433-1|AAA28154.1| 838|Caenorhabditis elegans polyubiquitin
protein.
Length = 838
Score = 141 bits (342), Expect = 2e-34
Identities = 69/71 (97%), Positives = 69/71 (97%)
Frame = -2
Query: 433 KPLXGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 254
K L GKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES
Sbjct: 6 KTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 65
Query: 253 TLHLVLRLRGG 221
TLHLVLRLRGG
Sbjct: 66 TLHLVLRLRGG 76
Score = 141 bits (342), Expect = 2e-34
Identities = 69/71 (97%), Positives = 69/71 (97%)
Frame = -2
Query: 433 KPLXGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 254
K L GKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES
Sbjct: 82 KTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 141
Query: 253 TLHLVLRLRGG 221
TLHLVLRLRGG
Sbjct: 142 TLHLVLRLRGG 152
Score = 141 bits (342), Expect = 2e-34
Identities = 69/71 (97%), Positives = 69/71 (97%)
Frame = -2
Query: 433 KPLXGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 254
K L GKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES
Sbjct: 158 KTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 217
Query: 253 TLHLVLRLRGG 221
TLHLVLRLRGG
Sbjct: 218 TLHLVLRLRGG 228
Score = 141 bits (342), Expect = 2e-34
Identities = 69/71 (97%), Positives = 69/71 (97%)
Frame = -2
Query: 433 KPLXGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 254
K L GKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES
Sbjct: 234 KTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 293
Query: 253 TLHLVLRLRGG 221
TLHLVLRLRGG
Sbjct: 294 TLHLVLRLRGG 304
Score = 141 bits (342), Expect = 2e-34
Identities = 69/71 (97%), Positives = 69/71 (97%)
Frame = -2
Query: 433 KPLXGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 254
K L GKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES
Sbjct: 310 KTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 369
Query: 253 TLHLVLRLRGG 221
TLHLVLRLRGG
Sbjct: 370 TLHLVLRLRGG 380
Score = 141 bits (342), Expect = 2e-34
Identities = 69/71 (97%), Positives = 69/71 (97%)
Frame = -2
Query: 433 KPLXGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 254
K L GKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES
Sbjct: 386 KTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 445
Query: 253 TLHLVLRLRGG 221
TLHLVLRLRGG
Sbjct: 446 TLHLVLRLRGG 456
Score = 141 bits (342), Expect = 2e-34
Identities = 69/71 (97%), Positives = 69/71 (97%)
Frame = -2
Query: 433 KPLXGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 254
K L GKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES
Sbjct: 462 KTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 521
Query: 253 TLHLVLRLRGG 221
TLHLVLRLRGG
Sbjct: 522 TLHLVLRLRGG 532
Score = 141 bits (342), Expect = 2e-34
Identities = 69/71 (97%), Positives = 69/71 (97%)
Frame = -2
Query: 433 KPLXGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 254
K L GKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES
Sbjct: 538 KTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 597
Query: 253 TLHLVLRLRGG 221
TLHLVLRLRGG
Sbjct: 598 TLHLVLRLRGG 608
Score = 141 bits (342), Expect = 2e-34
Identities = 69/71 (97%), Positives = 69/71 (97%)
Frame = -2
Query: 433 KPLXGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 254
K L GKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES
Sbjct: 614 KTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 673
Query: 253 TLHLVLRLRGG 221
TLHLVLRLRGG
Sbjct: 674 TLHLVLRLRGG 684
Score = 141 bits (342), Expect = 2e-34
Identities = 69/71 (97%), Positives = 69/71 (97%)
Frame = -2
Query: 433 KPLXGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 254
K L GKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES
Sbjct: 690 KTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 749
Query: 253 TLHLVLRLRGG 221
TLHLVLRLRGG
Sbjct: 750 TLHLVLRLRGG 760
Score = 141 bits (342), Expect = 2e-34
Identities = 69/73 (94%), Positives = 70/73 (95%)
Frame = -2
Query: 433 KPLXGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 254
K L GKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQK+S
Sbjct: 766 KTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKQS 825
Query: 253 TLHLVLRLRGGTI 215
TLHLVLRLRGG I
Sbjct: 826 TLHLVLRLRGGDI 838
>Z78420-1|CAB01708.1| 77|Caenorhabditis elegans Hypothetical
protein F45H11.2 protein.
Length = 77
Score = 92.7 bits (220), Expect = 1e-19
Identities = 41/71 (57%), Positives = 53/71 (74%)
Frame = -2
Query: 433 KPLXGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 254
K L GK I L++E +D +E +K K+++KEGIPP QQRLIFAGKQ+ D +T +DY + S
Sbjct: 6 KTLTGKEIELDIEPNDRVERIKEKVEEKEGIPPPQQRLIFAGKQMNDDKTAADYKVLGGS 65
Query: 253 TLHLVLRLRGG 221
LHLVL LRGG
Sbjct: 66 VLHLVLALRGG 76
>AF040645-8|AAB94982.1| 292|Caenorhabditis elegans Hypothetical
protein F52C6.4 protein.
Length = 292
Score = 81.8 bits (193), Expect = 2e-16
Identities = 38/71 (53%), Positives = 50/71 (70%)
Frame = -2
Query: 439 SSKPLXGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQK 260
S K L GKTI + ++ +DT+E +K K+Q+K G+PPDQQRLIF QLE+ R L YNI+
Sbjct: 164 SVKTLFGKTIPISIKNTDTVETLKFKVQNKHGVPPDQQRLIFGRAQLENDRALFAYNIRD 223
Query: 259 ESTLHLVLRLR 227
E +HLV R R
Sbjct: 224 EDIIHLVSRHR 234
Score = 38.7 bits (86), Expect = 0.002
Identities = 20/55 (36%), Positives = 32/55 (58%)
Frame = -2
Query: 406 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 242
+ VEASD I+++ K+ + + P ++ +D RT+SDYNI+ STL L
Sbjct: 103 ITVEASDAIKDLNFKVAEAQRKPHQPSNIVLC----KDQRTISDYNIKNGSTLRL 153
Score = 27.1 bits (57), Expect = 7.5
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = -2
Query: 439 SSKPLXGKTITLEVEASDTIENVKAKIQDKEGI 341
S K GKTIT+E +NVK +++DK+G+
Sbjct: 62 SVKTSTGKTITVEAP-----KNVKTEVRDKQGV 89
>M21321-1|AAA28153.1| 37|Caenorhabditis elegans protein (
C.elegans ubiquitin A(UbiA) gene, 5' end. ).
Length = 37
Score = 62.1 bits (144), Expect = 2e-10
Identities = 30/32 (93%), Positives = 30/32 (93%)
Frame = -2
Query: 433 KPLXGKTITLEVEASDTIENVKAKIQDKEGIP 338
K L GKTITLEVEASDTIENVKAKIQDKEGIP
Sbjct: 6 KTLTGKTITLEVEASDTIENVKAKIQDKEGIP 37
>L16530-1|AAA28161.1| 163|Caenorhabditis elegans
ubiquitin-like:ribosomal proteinfusion protein protein.
Length = 163
Score = 60.5 bits (140), Expect = 7e-10
Identities = 30/66 (45%), Positives = 46/66 (69%)
Frame = -2
Query: 418 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 239
+T+ LEV A++ + ++K KI+ EGIP ++QRL +AG+QLED SD I E+T+++
Sbjct: 9 RTLFLEVAANEDVLSIKQKIEAAEGIPAEEQRLCYAGRQLED----SDCGIDSEATIYVN 64
Query: 238 LRLRGG 221
L L GG
Sbjct: 65 LELLGG 70
>AC006651-4|AAF39865.1| 163|Caenorhabditis elegans Ubiquitin-like
family protein 1,isoform a protein.
Length = 163
Score = 60.5 bits (140), Expect = 7e-10
Identities = 30/66 (45%), Positives = 46/66 (69%)
Frame = -2
Query: 418 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 239
+T+ LEV A++ + ++K KI+ EGIP ++QRL +AG+QLED SD I E+T+++
Sbjct: 9 RTLFLEVAANEDVLSIKQKIEAAEGIPAEEQRLCYAGRQLED----SDCGIDSEATIYVN 64
Query: 238 LRLRGG 221
L L GG
Sbjct: 65 LELLGG 70
>U80452-4|AAB37860.1| 226|Caenorhabditis elegans Hypothetical
protein C16C8.4 protein.
Length = 226
Score = 51.2 bits (117), Expect = 4e-07
Identities = 23/63 (36%), Positives = 37/63 (58%)
Frame = -2
Query: 421 GKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 242
G + ++ DT+ ++K I+ + IP L F+GK+LED ++ DYNIQK ST+ +
Sbjct: 162 GVSYAFKIHREDTVFDIKNDIEHRHDIPQHSYWLSFSGKRLEDHCSIGDYNIQKSSTITM 221
Query: 241 VLR 233
R
Sbjct: 222 YFR 224
>AF040645-9|AAB94972.2| 197|Caenorhabditis elegans Hypothetical
protein F52C6.3 protein.
Length = 197
Score = 46.4 bits (105), Expect = 1e-05
Identities = 27/63 (42%), Positives = 38/63 (60%), Gaps = 3/63 (4%)
Frame = -2
Query: 421 GKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLE---DGRTLSDYNIQKEST 251
G+T TL+ ASDT+ +VKAKI +K I P+ Q+L+ L+ D TL D + + ST
Sbjct: 111 GRTCTLDTSASDTMASVKAKIWEKLRILPNTQKLLLENWDLDLFSDHSTLFDNSFENGST 170
Query: 250 LHL 242
L L
Sbjct: 171 LRL 173
>AF040643-4|AAB94965.1| 110|Caenorhabditis elegans Hypothetical
protein F14D2.11 protein.
Length = 110
Score = 44.4 bits (100), Expect = 5e-05
Identities = 26/66 (39%), Positives = 34/66 (51%)
Frame = -2
Query: 427 LXGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 248
L GKT TL V ASDT+E K ++ R+ + GK L D T +YNI ST+
Sbjct: 49 LNGKTRTLNVNASDTVEQGKMQLCHN----ARSTRMSYGGKPLSDQITFGEYNISNNSTM 104
Query: 247 HLVLRL 230
L R+
Sbjct: 105 DLHFRI 110
>U80452-8|AAB37855.1| 244|Caenorhabditis elegans Hypothetical
protein C16C8.13 protein.
Length = 244
Score = 43.2 bits (97), Expect = 1e-04
Identities = 25/60 (41%), Positives = 30/60 (50%)
Frame = -2
Query: 421 GKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 242
G L V SDTI VK I + R++ K LED TL+ YNIQ+ STL L
Sbjct: 182 GNYRNLWVRGSDTIRQVKLTINSLANVDISSFRMVLRDKVLEDDHTLAYYNIQEGSTLGL 241
>U09415-1|AAA82164.1| 655|Caenorhabditis elegans Ceprp21 protein.
Length = 655
Score = 41.9 bits (94), Expect = 2e-04
Identities = 17/69 (24%), Positives = 40/69 (57%)
Frame = -2
Query: 427 LXGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 248
+ G + ++ + + +K +IQD+ G+P +Q+L+ G ++D + + YN+ + +
Sbjct: 584 MDGSIVQFTIQVTAPMSELKQQIQDRYGMPVGKQKLMSDGLFVKDNMSSAFYNLADRTAI 643
Query: 247 HLVLRLRGG 221
+L ++ RGG
Sbjct: 644 YLQVKERGG 652
>AF106576-5|AAC78179.1| 655|Caenorhabditis elegans Yeast prp
(splicing factor) relatedprotein 21 protein.
Length = 655
Score = 41.9 bits (94), Expect = 2e-04
Identities = 17/69 (24%), Positives = 40/69 (57%)
Frame = -2
Query: 427 LXGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 248
+ G + ++ + + +K +IQD+ G+P +Q+L+ G ++D + + YN+ + +
Sbjct: 584 MDGSIVQFTIQVTAPMSELKQQIQDRYGMPVGKQKLMSDGLFVKDNMSSAFYNLADRTAI 643
Query: 247 HLVLRLRGG 221
+L ++ RGG
Sbjct: 644 YLQVKERGG 652
>U80452-6|AAB37858.1| 592|Caenorhabditis elegans Hypothetical
protein C16C8.16 protein.
Length = 592
Score = 40.3 bits (90), Expect = 7e-04
Identities = 21/60 (35%), Positives = 33/60 (55%)
Frame = -2
Query: 406 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 227
L V SDTI ++K +I + R++ GK LED +L+ YNIQ+ + + L L+
Sbjct: 210 LRVCGSDTIRHIKLRINSLAKVDISSFRMVLRGKLLEDHHSLAYYNIQEGALIWLYSHLK 269
>AC006651-5|AAM48542.1| 47|Caenorhabditis elegans Ubiquitin-like
family protein 1,isoform b protein.
Length = 47
Score = 39.5 bits (88), Expect = 0.001
Identities = 16/38 (42%), Positives = 28/38 (73%)
Frame = -2
Query: 418 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGK 305
+T+ LEV A++ + ++K KI+ EGIP ++QRL +A +
Sbjct: 9 RTLFLEVAANEDVLSIKQKIEAAEGIPAEEQRLCYAAR 46
>U80452-7|AAB37856.1| 233|Caenorhabditis elegans Hypothetical
protein C16C8.14 protein.
Length = 233
Score = 39.1 bits (87), Expect = 0.002
Identities = 22/53 (41%), Positives = 28/53 (52%)
Frame = -2
Query: 406 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 248
L V SDTI +K +I GI R K LED TL+ YNI++ ST+
Sbjct: 176 LRVCGSDTIRQIKPRINSLAGIDTISFRTFCDDKFLEDDHTLAHYNIREGSTI 228
>U80452-10|AAB37853.1| 214|Caenorhabditis elegans Hypothetical
protein C16C8.11 protein.
Length = 214
Score = 34.7 bits (76), Expect = 0.037
Identities = 18/65 (27%), Positives = 38/65 (58%)
Frame = -2
Query: 427 LXGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 248
+ G+ ++ +++E +K KI+ + GIP + L GK L D + L+DY + ++++
Sbjct: 150 MPGRLFSIGANKMESVEQLKMKIECQTGIPRTKFWLRLHGKPLYDDKKLADY--KWDTSV 207
Query: 247 HLVLR 233
L++R
Sbjct: 208 ELLVR 212
>AF099917-6|AAC68780.1| 264|Caenorhabditis elegans Hypothetical
protein F54D10.7 protein.
Length = 264
Score = 34.3 bits (75), Expect = 0.049
Identities = 21/72 (29%), Positives = 38/72 (52%)
Frame = -2
Query: 463 IGATQCKYSSKPLXGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 284
IG+ K++ L G I +E+++ DTI V + G+ +QRL+ K+L+ +T
Sbjct: 178 IGSKNIKFNVI-LHGSRIPMELDSLDTIYTVGMALLKHGGLALHRQRLMLNDKELQYNQT 236
Query: 283 LSDYNIQKESTL 248
L + I+ S +
Sbjct: 237 LEEAGIKDGSVI 248
>Z81568-9|CAB04599.2| 386|Caenorhabditis elegans Hypothetical
protein K08E3.7 protein.
Length = 386
Score = 33.1 bits (72), Expect = 0.11
Identities = 13/60 (21%), Positives = 31/60 (51%)
Frame = -2
Query: 418 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 239
+ +TL + + IE++ ++ IP D+ ++F GK+L + D ++ + + L+
Sbjct: 18 RNLTLNINITGNIEDLTKDVEKLTEIPSDELEVVFCGKKLSKSTIMRDLSLTPATQIMLL 77
>Z80215-7|CAB02274.1| 674|Caenorhabditis elegans Hypothetical
protein C36B1.9 protein.
Length = 674
Score = 29.5 bits (63), Expect = 1.4
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = -2
Query: 163 CRKCYARLHPRATDCRKTKCGHT 95
CR CY H + R +CGHT
Sbjct: 63 CRVCYDEYHSSSNQARVLQCGHT 85
>U80452-5|AAB37859.1| 180|Caenorhabditis elegans Hypothetical
protein C16C8.5 protein.
Length = 180
Score = 28.7 bits (61), Expect = 2.4
Identities = 16/65 (24%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Frame = -2
Query: 406 LEVEASDTIENVKAKIQDK-EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 230
+EV S I V+ K+ + + L + G++L+D R++ YNI + ++L +
Sbjct: 100 VEVRNSYLIRYVRVKVANLLNNDLVESFNLYYGGQKLQDNRSIGSYNIDQSREIYLKKKK 159
Query: 229 RGGTI 215
+ T+
Sbjct: 160 KLSTL 164
>U00054-3|AAM48546.1| 12268|Caenorhabditis elegans Hypothetical
protein K07E12.1b protein.
Length = 12268
Score = 27.5 bits (58), Expect = 5.7
Identities = 19/52 (36%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Frame = -2
Query: 349 EGIP-PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGTIEPSLRI 197
EG P PD + + G QL DG L +I+K + RGG E L I
Sbjct: 1463 EGYPAPDVRWVDSHGNQLSDGPLLRIIDIRKTLNAKCLAENRGGLKETDLTI 1514
>U00054-2|AAA50715.2| 13100|Caenorhabditis elegans Hypothetical
protein K07E12.1a protein.
Length = 13100
Score = 27.5 bits (58), Expect = 5.7
Identities = 19/52 (36%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Frame = -2
Query: 349 EGIP-PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGTIEPSLRI 197
EG P PD + + G QL DG L +I+K + RGG E L I
Sbjct: 1526 EGYPAPDVRWVDSHGNQLSDGPLLRIIDIRKTLNAKCLAENRGGLKETDLTI 1577
>AY117398-1|AAM78593.1| 13100|Caenorhabditis elegans mesocentin
protein.
Length = 13100
Score = 27.5 bits (58), Expect = 5.7
Identities = 19/52 (36%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Frame = -2
Query: 349 EGIP-PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGTIEPSLRI 197
EG P PD + + G QL DG L +I+K + RGG E L I
Sbjct: 1526 EGYPAPDVRWVDSHGNQLSDGPLLRIIDIRKTLNAKCLAENRGGLKETDLTI 1577
>Z50755-4|CAA90634.1| 369|Caenorhabditis elegans Hypothetical
protein R12H7.4 protein.
Length = 369
Score = 27.1 bits (57), Expect = 7.5
Identities = 15/39 (38%), Positives = 18/39 (46%), Gaps = 2/39 (5%)
Frame = +3
Query: 348 SLSWILALTFSIVSEASTSNVMVFPXKGF--DEYLHCVA 458
S+ WIL F IV + FP K + YLHC A
Sbjct: 109 SIPWILYYIFPIVLAIGPTLATYFPEKKYYGTAYLHCSA 147
>U41994-13|AAK31527.2| 1425|Caenorhabditis elegans Neuronal symmetry
protein 1 protein.
Length = 1425
Score = 27.1 bits (57), Expect = 7.5
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = -2
Query: 307 KQLEDGRTLSDYNIQKESTLHLVLRLRGGTIEPSLRILAMK 185
K ++D R L DY+ K ++L L +I+P LR L +K
Sbjct: 1173 KMIDDIRGLLDYDTAKIGQINLALYHFSDSIQPVLRRLDIK 1213
>AF003130-4|AAB54126.1| 1043|Caenorhabditis elegans Hypothetical
protein F55A12.8 protein.
Length = 1043
Score = 26.6 bits (56), Expect = 9.9
Identities = 11/33 (33%), Positives = 21/33 (63%)
Frame = -2
Query: 418 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRL 320
KT+ +V+ T+E ++ +I+ + +PP QRL
Sbjct: 664 KTVIKQVKDGHTVELLEERIEPRADLPPLLQRL 696
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,652,147
Number of Sequences: 27780
Number of extensions: 238457
Number of successful extensions: 669
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 582
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 669
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 935344784
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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