Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_pT_C16
         (623 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    21   6.3  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    21   6.3  
AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cogna...    21   6.3  
AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock prote...    21   6.3  
X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.          21   8.4  
DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11 pro...    21   8.4  
AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.           21   8.4  

>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 6/25 (24%), Positives = 14/25 (56%)
 Frame = +2

Query: 518 GVQVQRLIQEHFDDQITSFDMIEEH 592
           G +V+  +  + DD + + + + EH
Sbjct: 447 GTEVREFVVNYIDDLLVASETLNEH 471


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = -1

Query: 476 CSNHKQVSQKCLEGPC 429
           C N K  S  C+E PC
Sbjct: 315 CFNAKPWSNYCVEPPC 330


>AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cognate
           70 protein.
          Length = 196

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +1

Query: 280 RRLRKSQSKVQLGIDSIFDG 339
           +R   S ++  + IDS+FDG
Sbjct: 99  KRTLSSATQASIEIDSLFDG 118


>AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock protein
           70 protein.
          Length = 196

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +1

Query: 280 RRLRKSQSKVQLGIDSIFDG 339
           +R   S ++  + IDS+FDG
Sbjct: 99  KRTLSSATQASIEIDSLFDG 118


>X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.
          Length = 251

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = -2

Query: 196 LAENLNMQPDEAECWIVN 143
           +AENLN+   + + W  N
Sbjct: 121 IAENLNLSERQIKIWFQN 138


>DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11
           protein.
          Length = 366

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = +2

Query: 74  LCTHHHVT*LGIDLRVQARITD 139
           LCTH H   LG++     +I D
Sbjct: 52  LCTHVHYAFLGVNSDGTLKILD 73


>AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.
          Length = 246

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = -2

Query: 196 LAENLNMQPDEAECWIVN 143
           +AENLN+   + + W  N
Sbjct: 112 IAENLNLSERQIKIWFQN 129


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 135,811
Number of Sequences: 336
Number of extensions: 2734
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15979473
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)