Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_pT_C16
         (623 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY122062-1|AAM52574.1|  372|Drosophila melanogaster AT01736p pro...   374   e-104
U89162-1|AAC62307.1|  435|Drosophila melanogaster Int6 protein.       373   e-103
AF132551-1|AAD27850.1|  435|Drosophila melanogaster GM01233p pro...   373   e-103
AE014296-2801|AAF49412.1|  435|Drosophila melanogaster CG9677-PA...   373   e-103
AY075166-1|AAL68036.1|  773|Drosophila melanogaster AT05602p pro...    29   3.9  
AE014296-722|AAF47814.2|  773|Drosophila melanogaster CG14982-PB...    29   3.9  

>AY122062-1|AAM52574.1|  372|Drosophila melanogaster AT01736p
           protein.
          Length = 372

 Score =  374 bits (921), Expect = e-104
 Identities = 170/205 (82%), Positives = 192/205 (93%)
 Frame = -2

Query: 622 RTWXVHWSLFVFFNHVKGRDLIIEMFLYKPLYLNAIQTMCPHILRYLATAVIINRSRRNA 443
           RTW +HWS+ VFFNH KGRDLIIEMFLYKPLYLNAIQTMCPHI+RYLATAV+INR+RRNA
Sbjct: 145 RTWLIHWSVLVFFNHPKGRDLIIEMFLYKPLYLNAIQTMCPHIMRYLATAVVINRTRRNA 204

Query: 442 LKDLVKVIQQEAYTYRDPITEFIEHLYVNFDFEAARRKLNQCQAVLLTDFFLIACLEEFV 263
           LKDL+KVIQQE+YTYRDPITEF+E LYVNFDFEAAR KL++CQ V+L DFF++ACL EFV
Sbjct: 205 LKDLIKVIQQESYTYRDPITEFLECLYVNFDFEAARLKLHECQTVILNDFFIVACLNEFV 264

Query: 262 ENARLMIFETFCRIHQVISIGMLAENLNMQPDEAECWIVNLIRNARLDAKIDSKLGHVVM 83
           E+ARLMIFETFCRIHQ I+I MLA+ LNM+P+EAECWIVNLIRNARL+AKIDSKLGHVVM
Sbjct: 265 EDARLMIFETFCRIHQCITISMLADKLNMKPNEAECWIVNLIRNARLNAKIDSKLGHVVM 324

Query: 82  GAQPLSPYQQLVERIDSLAVRSEAL 8
           G QPLSPYQQLVE+IDSL++RSE L
Sbjct: 325 GTQPLSPYQQLVEKIDSLSMRSEHL 349


>U89162-1|AAC62307.1|  435|Drosophila melanogaster Int6 protein.
          Length = 435

 Score =  373 bits (917), Expect = e-103
 Identities = 169/205 (82%), Positives = 191/205 (93%)
 Frame = -2

Query: 622 RTWXVHWSLFVFFNHVKGRDLIIEMFLYKPLYLNAIQTMCPHILRYLATAVIINRSRRNA 443
           RTW +HWS+ VFFNH KGRDLIIEMFLYKPLYLNAIQTMCPHI+RYLATAV+INR+RRNA
Sbjct: 208 RTWLIHWSVLVFFNHPKGRDLIIEMFLYKPLYLNAIQTMCPHIMRYLATAVVINRTRRNA 267

Query: 442 LKDLVKVIQQEAYTYRDPITEFIEHLYVNFDFEAARRKLNQCQAVLLTDFFLIACLEEFV 263
           LKDL+KVIQQE+YTYRDPITEF+E LYVNFDFE AR KL++CQ V+L DFF++ACL EFV
Sbjct: 268 LKDLIKVIQQESYTYRDPITEFLECLYVNFDFEGARLKLHECQTVILNDFFIVACLNEFV 327

Query: 262 ENARLMIFETFCRIHQVISIGMLAENLNMQPDEAECWIVNLIRNARLDAKIDSKLGHVVM 83
           E+ARLMIFETFCRIHQ I+I MLA+ LNM+P+EAECWIVNLIRNARL+AKIDSKLGHVVM
Sbjct: 328 EDARLMIFETFCRIHQCITISMLADKLNMKPNEAECWIVNLIRNARLNAKIDSKLGHVVM 387

Query: 82  GAQPLSPYQQLVERIDSLAVRSEAL 8
           G QPLSPYQQLVE+IDSL++RSE L
Sbjct: 388 GTQPLSPYQQLVEKIDSLSMRSEHL 412


>AF132551-1|AAD27850.1|  435|Drosophila melanogaster GM01233p
           protein.
          Length = 435

 Score =  373 bits (917), Expect = e-103
 Identities = 169/205 (82%), Positives = 191/205 (93%)
 Frame = -2

Query: 622 RTWXVHWSLFVFFNHVKGRDLIIEMFLYKPLYLNAIQTMCPHILRYLATAVIINRSRRNA 443
           RTW +HWS+ VFFNH KGRDLIIEMFLYKPLYLNAIQTMCPHI+RYLATAV+INR+RRNA
Sbjct: 208 RTWLIHWSVLVFFNHPKGRDLIIEMFLYKPLYLNAIQTMCPHIMRYLATAVVINRTRRNA 267

Query: 442 LKDLVKVIQQEAYTYRDPITEFIEHLYVNFDFEAARRKLNQCQAVLLTDFFLIACLEEFV 263
           LKDL+KVIQQE+YTYRDPITEF+E LYVNFDFE AR KL++CQ V+L DFF++ACL EFV
Sbjct: 268 LKDLIKVIQQESYTYRDPITEFLECLYVNFDFEGARLKLHECQTVILNDFFIVACLNEFV 327

Query: 262 ENARLMIFETFCRIHQVISIGMLAENLNMQPDEAECWIVNLIRNARLDAKIDSKLGHVVM 83
           E+ARLMIFETFCRIHQ I+I MLA+ LNM+P+EAECWIVNLIRNARL+AKIDSKLGHVVM
Sbjct: 328 EDARLMIFETFCRIHQCITISMLADKLNMKPNEAECWIVNLIRNARLNAKIDSKLGHVVM 387

Query: 82  GAQPLSPYQQLVERIDSLAVRSEAL 8
           G QPLSPYQQLVE+IDSL++RSE L
Sbjct: 388 GTQPLSPYQQLVEKIDSLSMRSEHL 412


>AE014296-2801|AAF49412.1|  435|Drosophila melanogaster CG9677-PA
           protein.
          Length = 435

 Score =  373 bits (917), Expect = e-103
 Identities = 169/205 (82%), Positives = 191/205 (93%)
 Frame = -2

Query: 622 RTWXVHWSLFVFFNHVKGRDLIIEMFLYKPLYLNAIQTMCPHILRYLATAVIINRSRRNA 443
           RTW +HWS+ VFFNH KGRDLIIEMFLYKPLYLNAIQTMCPHI+RYLATAV+INR+RRNA
Sbjct: 208 RTWLIHWSVLVFFNHPKGRDLIIEMFLYKPLYLNAIQTMCPHIMRYLATAVVINRTRRNA 267

Query: 442 LKDLVKVIQQEAYTYRDPITEFIEHLYVNFDFEAARRKLNQCQAVLLTDFFLIACLEEFV 263
           LKDL+KVIQQE+YTYRDPITEF+E LYVNFDFE AR KL++CQ V+L DFF++ACL EFV
Sbjct: 268 LKDLIKVIQQESYTYRDPITEFLECLYVNFDFEGARLKLHECQTVILNDFFIVACLNEFV 327

Query: 262 ENARLMIFETFCRIHQVISIGMLAENLNMQPDEAECWIVNLIRNARLDAKIDSKLGHVVM 83
           E+ARLMIFETFCRIHQ I+I MLA+ LNM+P+EAECWIVNLIRNARL+AKIDSKLGHVVM
Sbjct: 328 EDARLMIFETFCRIHQCITISMLADKLNMKPNEAECWIVNLIRNARLNAKIDSKLGHVVM 387

Query: 82  GAQPLSPYQQLVERIDSLAVRSEAL 8
           G QPLSPYQQLVE+IDSL++RSE L
Sbjct: 388 GTQPLSPYQQLVEKIDSLSMRSEHL 412


>AY075166-1|AAL68036.1|  773|Drosophila melanogaster AT05602p
           protein.
          Length = 773

 Score = 29.5 bits (63), Expect = 3.9
 Identities = 15/32 (46%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
 Frame = +1

Query: 73  VVH--PSPRDLTWNRSSRPGAHYGLSSRSSIP 162
           VVH   SPR  + N SS PG H+G +  S+ P
Sbjct: 4   VVHGCSSPRQRSCNGSSSPGGHHGSTPSSAYP 35


>AE014296-722|AAF47814.2|  773|Drosophila melanogaster CG14982-PB
           protein.
          Length = 773

 Score = 29.5 bits (63), Expect = 3.9
 Identities = 15/32 (46%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
 Frame = +1

Query: 73  VVH--PSPRDLTWNRSSRPGAHYGLSSRSSIP 162
           VVH   SPR  + N SS PG H+G +  S+ P
Sbjct: 4   VVHGCSSPRQRSCNGSSSPGGHHGSTPSSAYP 35


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,269,957
Number of Sequences: 53049
Number of extensions: 533773
Number of successful extensions: 1456
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1409
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1456
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2579793750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)