Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_pT_C06
         (794 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q960M4 Cluster: LD45324p; n=7; cellular organisms|Rep: ...    72   1e-11
UniRef50_A6NG06 Cluster: Uncharacterized protein PRDX5; n=4; Hom...    52   1e-05
UniRef50_A6NC19 Cluster: Uncharacterized protein PRDX5; n=9; Coe...    52   1e-05
UniRef50_P30044 Cluster: Peroxiredoxin-5, mitochondrial precurso...    52   1e-05
UniRef50_Q6GPY3 Cluster: MGC82521 protein; n=2; Xenopus|Rep: MGC...    52   2e-05
UniRef50_Q2GQL2 Cluster: Putative uncharacterized protein; n=1; ...    44   0.003
UniRef50_Q4WLS4 Cluster: AhpC/TSA family protein; n=19; Ascomyco...    44   0.006
UniRef50_A7EQ92 Cluster: Putative uncharacterized protein; n=2; ...    43   0.008
UniRef50_Q239U5 Cluster: Putative uncharacterized protein; n=1; ...    40   0.095
UniRef50_A5DWK7 Cluster: Putative uncharacterized protein; n=1; ...    37   0.51 
UniRef50_Q8CXD1 Cluster: Coproporphyrinogen oxidase III; n=1; Oc...    36   1.2  
UniRef50_Q75AS4 Cluster: ADL154Cp; n=3; Saccharomycetaceae|Rep: ...    35   2.7  
UniRef50_Q7K4B6 Cluster: Transmembrane and TPR repeat-containing...    35   2.7  
UniRef50_Q54YF4 Cluster: Putative uncharacterized protein; n=1; ...    34   3.6  
UniRef50_Q23JX9 Cluster: Putative uncharacterized protein; n=1; ...    33   8.3  
UniRef50_A2FZI4 Cluster: Putative uncharacterized protein; n=1; ...    33   8.3  

>UniRef50_Q960M4 Cluster: LD45324p; n=7; cellular organisms|Rep:
           LD45324p - Drosophila melanogaster (Fruit fly)
          Length = 190

 Score = 72.1 bits (169), Expect = 1e-11
 Identities = 33/51 (64%), Positives = 41/51 (80%)
 Frame = -3

Query: 792 AXDLGTNLPPLGGFRSKRFSMVIVDSKVQDLNVEPDGTGLSCSLADKIKVK 640
           A D+  +LPPLGG RSKR+S+V+ + KV +LNVEPDGTGLSCSLA+ I  K
Sbjct: 140 ALDVTIDLPPLGGVRSKRYSLVVENGKVTELNVEPDGTGLSCSLANNIGKK 190


>UniRef50_A6NG06 Cluster: Uncharacterized protein PRDX5; n=4;
           Homo/Pan/Gorilla group|Rep: Uncharacterized protein
           PRDX5 - Homo sapiens (Human)
          Length = 170

 Score = 52.4 bits (120), Expect = 1e-05
 Identities = 25/37 (67%), Positives = 28/37 (75%)
 Frame = -3

Query: 759 GGFRSKRFSMVIVDSKVQDLNVEPDGTGLSCSLADKI 649
           G  R KRFSMV+ D  V+ LNVEPDGTGL+CSLA  I
Sbjct: 130 GNRRLKRFSMVVQDGIVKALNVEPDGTGLTCSLAPNI 166


>UniRef50_A6NC19 Cluster: Uncharacterized protein PRDX5; n=9;
           Coelomata|Rep: Uncharacterized protein PRDX5 - Homo
           sapiens (Human)
          Length = 125

 Score = 52.4 bits (120), Expect = 1e-05
 Identities = 25/37 (67%), Positives = 28/37 (75%)
 Frame = -3

Query: 759 GGFRSKRFSMVIVDSKVQDLNVEPDGTGLSCSLADKI 649
           G  R KRFSMV+ D  V+ LNVEPDGTGL+CSLA  I
Sbjct: 85  GNRRLKRFSMVVQDGIVKALNVEPDGTGLTCSLAPNI 121


>UniRef50_P30044 Cluster: Peroxiredoxin-5, mitochondrial precursor;
           n=41; Eumetazoa|Rep: Peroxiredoxin-5, mitochondrial
           precursor - Homo sapiens (Human)
          Length = 214

 Score = 52.4 bits (120), Expect = 1e-05
 Identities = 25/37 (67%), Positives = 28/37 (75%)
 Frame = -3

Query: 759 GGFRSKRFSMVIVDSKVQDLNVEPDGTGLSCSLADKI 649
           G  R KRFSMV+ D  V+ LNVEPDGTGL+CSLA  I
Sbjct: 174 GNRRLKRFSMVVQDGIVKALNVEPDGTGLTCSLAPNI 210


>UniRef50_Q6GPY3 Cluster: MGC82521 protein; n=2; Xenopus|Rep:
           MGC82521 protein - Xenopus laevis (African clawed frog)
          Length = 189

 Score = 51.6 bits (118), Expect = 2e-05
 Identities = 23/37 (62%), Positives = 28/37 (75%)
 Frame = -3

Query: 759 GGFRSKRFSMVIVDSKVQDLNVEPDGTGLSCSLADKI 649
           G  R KRFSMV+ D K++ +NVE DGTGL+CSLA  I
Sbjct: 149 GNQRCKRFSMVVEDGKIKAINVEEDGTGLTCSLAGNI 185


>UniRef50_Q2GQL2 Cluster: Putative uncharacterized protein; n=1;
           Chaetomium globosum|Rep: Putative uncharacterized
           protein - Chaetomium globosum (Soil fungus)
          Length = 184

 Score = 44.4 bits (100), Expect = 0.003
 Identities = 19/37 (51%), Positives = 28/37 (75%)
 Frame = -3

Query: 759 GGFRSKRFSMVIVDSKVQDLNVEPDGTGLSCSLADKI 649
           GG RSKR+++V+   KV+ + VEPD TG S SLA+++
Sbjct: 142 GGDRSKRYAIVVEQGKVKSVAVEPDNTGTSVSLAEQV 178


>UniRef50_Q4WLS4 Cluster: AhpC/TSA family protein; n=19;
           Ascomycota|Rep: AhpC/TSA family protein - Aspergillus
           fumigatus (Sartorya fumigata)
          Length = 220

 Score = 43.6 bits (98), Expect = 0.006
 Identities = 17/37 (45%), Positives = 28/37 (75%)
 Frame = -3

Query: 759 GGFRSKRFSMVIVDSKVQDLNVEPDGTGLSCSLADKI 649
           G  RSKR+++V+ D KV++  +EPD TG++ S A+K+
Sbjct: 182 GNQRSKRYALVVEDGKVKEAYIEPDNTGVNVSAAEKV 218


>UniRef50_A7EQ92 Cluster: Putative uncharacterized protein; n=2;
           Sclerotiniaceae|Rep: Putative uncharacterized protein -
           Sclerotinia sclerotiorum 1980
          Length = 183

 Score = 43.2 bits (97), Expect = 0.008
 Identities = 21/40 (52%), Positives = 28/40 (70%)
 Frame = -3

Query: 768 PPLGGFRSKRFSMVIVDSKVQDLNVEPDGTGLSCSLADKI 649
           P LG  RSKR+++VI   KV+ +N+EPD  G + S ADKI
Sbjct: 114 PLLGTNRSKRYAIVIEGGKVKSVNIEPDNIGHTVSGADKI 153


>UniRef50_Q239U5 Cluster: Putative uncharacterized protein; n=1;
            Tetrahymena thermophila SB210|Rep: Putative
            uncharacterized protein - Tetrahymena thermophila SB210
          Length = 2709

 Score = 39.5 bits (88), Expect = 0.095
 Identities = 26/102 (25%), Positives = 48/102 (47%), Gaps = 1/102 (0%)
 Frame = +3

Query: 114  FFFVLALCAVFRNYTNSERRHFENFLILTKT*QEILNATAKMLLYIFEVFNYINSKSKRS 293
            ++++    A     TN + +     + L    Q ++     +++Y+F   +Y++S S+  
Sbjct: 2145 YYYIYISNATLITITNFQFQQTAQLIDLYSDQQNLIELNLPVVVYVFNTLSYVDSFSEYQ 2204

Query: 294  QTILFKSIVRCVRLFNSVALY-VKLLS*QPKQINNMKTRINA 416
            QTI    I+      NS+ALY VK L  Q  Q+N    ++ A
Sbjct: 2205 QTITNDEIIHIEA--NSIALYSVKFLQLQSFQLNTQIIKLFA 2244


>UniRef50_A5DWK7 Cluster: Putative uncharacterized protein; n=1;
           Lodderomyces elongisporus NRRL YB-4239|Rep: Putative
           uncharacterized protein - Lodderomyces elongisporus
           (Yeast) (Saccharomyces elongisporus)
          Length = 193

 Score = 37.1 bits (82), Expect = 0.51
 Identities = 16/37 (43%), Positives = 24/37 (64%)
 Frame = -3

Query: 759 GGFRSKRFSMVIVDSKVQDLNVEPDGTGLSCSLADKI 649
           G  RSKR+++++ D KV +  VEPD T +  S A K+
Sbjct: 149 GNERSKRYALLVRDGKVAEAFVEPDNTSVDVSAAPKV 185


>UniRef50_Q8CXD1 Cluster: Coproporphyrinogen oxidase III; n=1;
           Oceanobacillus iheyensis|Rep: Coproporphyrinogen oxidase
           III - Oceanobacillus iheyensis
          Length = 391

 Score = 35.9 bits (79), Expect = 1.2
 Identities = 13/35 (37%), Positives = 22/35 (62%)
 Frame = +1

Query: 445 DYIKCIIYDFDCALVTFNTAFASIYLGS*TPREKN 549
           DYI+ +I++ DC ++ +N    +IY+G  TP   N
Sbjct: 35  DYIEALIHEIDCTVIGYNVHVDTIYMGGGTPTALN 69


>UniRef50_Q75AS4 Cluster: ADL154Cp; n=3; Saccharomycetaceae|Rep:
           ADL154Cp - Ashbya gossypii (Yeast) (Eremothecium
           gossypii)
          Length = 197

 Score = 34.7 bits (76), Expect = 2.7
 Identities = 17/37 (45%), Positives = 23/37 (62%)
 Frame = -3

Query: 759 GGFRSKRFSMVIVDSKVQDLNVEPDGTGLSCSLADKI 649
           G  RS R+++V+ D KV    VEPD TGL  S A+ +
Sbjct: 157 GNDRSVRYALVVEDGKVVRDFVEPDKTGLKVSAAENV 193


>UniRef50_Q7K4B6 Cluster: Transmembrane and TPR repeat-containing
           protein CG4050; n=2; Sophophora|Rep: Transmembrane and
           TPR repeat-containing protein CG4050 - Drosophila
           melanogaster (Fruit fly)
          Length = 926

 Score = 34.7 bits (76), Expect = 2.7
 Identities = 27/87 (31%), Positives = 40/87 (45%), Gaps = 4/87 (4%)
 Frame = +1

Query: 517 YLGS*TPREKNKLRNVTNEVKIALISFLCYLI--LQC--DITHCLLHFDLIGERTRQASA 684
           Y  S  PRE+ +    TN  +  L+ FLC  +  + C  + T C L FD I    R    
Sbjct: 12  YAPSTLPRERER-EGATNSPQRNLLEFLCICVACIVCYYNSTQCGLVFDDISA-IRDNKD 69

Query: 685 IGLHIQILNLAVNDDHGEPFGAETSER 765
           +  H  ++N+ +ND  G P   E S +
Sbjct: 70  LRPHTPLINVFLNDFWGTPMRKEQSHK 96


>UniRef50_Q54YF4 Cluster: Putative uncharacterized protein; n=1;
           Dictyostelium discoideum AX4|Rep: Putative
           uncharacterized protein - Dictyostelium discoideum AX4
          Length = 660

 Score = 34.3 bits (75), Expect = 3.6
 Identities = 24/70 (34%), Positives = 34/70 (48%)
 Frame = +3

Query: 255 EVFNYINSKSKRSQTILFKSIVRCVRLFNSVALYVKLLS*QPKQINNMKTRINADFPTIF 434
           E++N I+  ++ S T   KS  + +  F S   +VKL+S       N K RI   F  I 
Sbjct: 137 EIYNEIDIYNENSTTTTTKSKKKKITTFQSGNYFVKLISIFKTLFKN-KRRILVGFLAIN 195

Query: 435 LAFRLY*VYN 464
           + F LY  YN
Sbjct: 196 IGFPLYLAYN 205


>UniRef50_Q23JX9 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 534

 Score = 33.1 bits (72), Expect = 8.3
 Identities = 17/42 (40%), Positives = 25/42 (59%)
 Frame = -3

Query: 207 KFLSKLESFQNDVFHYSCNYEKRRKEPKQKKIFRATSRVSKI 82
           + +SKL + QND+  Y C YEK    P Q+  F+ TS ++ I
Sbjct: 67  QIISKLNT-QNDL--YQCEYEKNLTTPSQQSEFQMTSSINSI 105


>UniRef50_A2FZI4 Cluster: Putative uncharacterized protein; n=1;
            Trichomonas vaginalis G3|Rep: Putative uncharacterized
            protein - Trichomonas vaginalis G3
          Length = 1046

 Score = 33.1 bits (72), Expect = 8.3
 Identities = 19/65 (29%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
 Frame = -3

Query: 282  ICYLCN*KLRICIITFLLLHLISLVKFLSKLESFQNDVFHYS-CNYEKR--RKEPKQKKI 112
            I Y+C     IC+I  L+L++  +++  SK +     + HYS  N+ ++  +K+ ++K I
Sbjct: 958  IAYVCLFTPVICLIFKLILYIAFILEKKSKFDKLNRAIKHYSVANFRQKFTQKDEEEKHI 1017

Query: 111  FRATS 97
            F   S
Sbjct: 1018 FNPYS 1022


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 710,903,635
Number of Sequences: 1657284
Number of extensions: 13253273
Number of successful extensions: 29324
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 28392
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29317
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 67908372675
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)