Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_pT_C06
         (794 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY705404-1|AAU12513.1|  406|Anopheles gambiae nicotinic acetylch...    25   3.6  
AY330182-1|AAQ16288.1|  181|Anopheles gambiae odorant-binding pr...    24   4.7  
AY193728-1|AAO62001.1|  519|Anopheles gambiae cytochrome P450 CY...    24   4.7  
AJ618927-1|CAF02006.1|  235|Anopheles gambiae odorant-binding pr...    24   4.7  
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           23   8.2  

>AY705404-1|AAU12513.1|  406|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 9 protein.
          Length = 406

 Score = 24.6 bits (51), Expect = 3.6
 Identities = 19/53 (35%), Positives = 28/53 (52%)
 Frame = +1

Query: 436 WHFDYIKCIIYDFDCALVTFNTAFASIYLGS*TPREKNKLRNVTNEVKIALIS 594
           W FDY KCI+        TF+    ++ +GS  P+ +  + N  +E KIA IS
Sbjct: 169 WPFDYQKCIV---KIGSWTFDGYMLNLTIGS-EPQIETLVSN--SEWKIAKIS 215


>AY330182-1|AAQ16288.1|  181|Anopheles gambiae odorant-binding
           protein AgamOBP56 protein.
          Length = 181

 Score = 24.2 bits (50), Expect = 4.7
 Identities = 11/19 (57%), Positives = 12/19 (63%)
 Frame = -1

Query: 728 SSLTARFKI*MWSPMALAC 672
           SS T+ F   MW  MALAC
Sbjct: 129 SSETSNFGYCMWRQMALAC 147


>AY193728-1|AAO62001.1|  519|Anopheles gambiae cytochrome P450
           CYPm3r5 protein.
          Length = 519

 Score = 24.2 bits (50), Expect = 4.7
 Identities = 18/61 (29%), Positives = 29/61 (47%)
 Frame = -3

Query: 261 KLRICIITFLLLHLISLVKFLSKLESFQNDVFHYSCNYEKRRKEPKQKKIFRATSRVSKI 82
           K R C++  L  H   +V +    ES +N ++   C YE  RK P    + R  ++  +I
Sbjct: 340 KARECVLEALAKH-DGVVSY----ESSKNMLYLDQCIYETLRKYPPVAILERIVTKPYRI 394

Query: 81  P 79
           P
Sbjct: 395 P 395


>AJ618927-1|CAF02006.1|  235|Anopheles gambiae odorant-binding
           protein OBPjj7a protein.
          Length = 235

 Score = 24.2 bits (50), Expect = 4.7
 Identities = 11/19 (57%), Positives = 12/19 (63%)
 Frame = -1

Query: 728 SSLTARFKI*MWSPMALAC 672
           SS T+ F   MW  MALAC
Sbjct: 183 SSETSNFGYCMWRQMALAC 201


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 23.4 bits (48), Expect = 8.2
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = +3

Query: 345 VALYVKLLS*QPKQINNMKTRINADFPT 428
           V     LL  QP+Q+  + T +  DFPT
Sbjct: 589 VTYKTSLLHLQPRQMKLVITELRDDFPT 616


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 775,770
Number of Sequences: 2352
Number of extensions: 13825
Number of successful extensions: 10
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 83576403
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)