Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_pT_C03
         (377 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY584475-1|AAS93634.1|  209|Tribolium castaneum homothorax protein.    21   3.1  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    21   3.1  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    21   3.1  
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    21   3.1  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    21   4.1  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     21   5.4  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    20   7.2  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      20   7.2  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    20   9.5  
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    20   9.5  

>AY584475-1|AAS93634.1|  209|Tribolium castaneum homothorax protein.
          Length = 209

 Score = 21.4 bits (43), Expect = 3.1
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = +2

Query: 14  LVSAFALHTEIDESEPDSTLX*C*RKRW 97
           L  A A    +D S+PD+    C R+ W
Sbjct: 98  LSQAPASQQSLDASDPDAMGKWCPRREW 125


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 21.4 bits (43), Expect = 3.1
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -1

Query: 203 NYSAKGLRTFITFYPRCH 150
           NYS K +R+   FY  C+
Sbjct: 5   NYSKKDIRSLSFFYKICN 22


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 21.4 bits (43), Expect = 3.1
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -1

Query: 203 NYSAKGLRTFITFYPRCH 150
           NYS K +R+   FY  C+
Sbjct: 5   NYSKKDIRSLSFFYKICN 22


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 21.4 bits (43), Expect = 3.1
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = +2

Query: 14  LVSAFALHTEIDESEPDSTLX*C*RKRW 97
           L  A A    +D S+PD+    C R+ W
Sbjct: 254 LSQAPASQQSLDASDPDAMGKWCPRREW 281


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 21.0 bits (42), Expect = 4.1
 Identities = 7/18 (38%), Positives = 9/18 (50%)
 Frame = -1

Query: 236 WSTITTLSTTPNYSAKGL 183
           WS      +TP Y  +GL
Sbjct: 178 WSATPQAGSTPTYQTQGL 195


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 20.6 bits (41), Expect = 5.4
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = -1

Query: 110 DKTHTTASANITXRWNRVHFRQSPY 36
           D  +  +S + T  W+  H + SPY
Sbjct: 121 DVVNHLSSDSTTIHWHGHHQKNSPY 145


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 20.2 bits (40), Expect = 7.2
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = -3

Query: 234 VYHHNAKYDAK 202
           +Y+H A YD+K
Sbjct: 166 LYNHTANYDSK 176


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 20.2 bits (40), Expect = 7.2
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +1

Query: 247 DIGTDE*VTAFYDHHSGED 303
           D+G+ + V  F D   GED
Sbjct: 11  DLGSTDEVKVFKDEGDGED 29


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 19.8 bits (39), Expect = 9.5
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -1

Query: 254  PISIDLWSTITTLSTT 207
            P + + W T TT STT
Sbjct: 1177 PSTTNHWQTKTTTSTT 1192


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 19.8 bits (39), Expect = 9.5
 Identities = 4/13 (30%), Positives = 9/13 (69%)
 Frame = -2

Query: 154 AIHHWQVHXREFW 116
           A+++W+    +FW
Sbjct: 118 AVYYWRQQYEDFW 130


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,653
Number of Sequences: 336
Number of extensions: 1906
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  7803226
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)