Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_pT_C03
         (377 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592176-1|ABQ95972.2|  661|Anopheles gambiae laccase-3 protein.       25   1.2  
AY534995-1|AAT07393.1|  461|Anopheles gambiae XK-related protein.      23   3.7  
AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein p...    23   4.9  
AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.       22   6.5  
AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcript...    22   6.5  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            22   8.6  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            22   8.6  

>EF592176-1|ABQ95972.2|  661|Anopheles gambiae laccase-3 protein.
          Length = 661

 Score = 24.6 bits (51), Expect = 1.2
 Identities = 9/38 (23%), Positives = 18/38 (47%)
 Frame = -1

Query: 149 PPLASPXQGILAYDKTHTTASANITXRWNRVHFRQSPY 36
           P ++     ++  D T+  A  +    W+ +H R +PY
Sbjct: 114 PTISVCRHDLIVVDITNAMAGTSAAIHWHGLHQRATPY 151


>AY534995-1|AAT07393.1|  461|Anopheles gambiae XK-related protein.
          Length = 461

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 10/35 (28%), Positives = 16/35 (45%)
 Frame = -1

Query: 239 LWSTITTLSTTPNYSAKGLRTFITFYPRCHPPLAS 135
           LW+ + T      +   G+   + FY  CHP + S
Sbjct: 415 LWTGLLTCFPIATFLV-GIGLMLVFYRYCHPNIIS 448


>AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein
           protein.
          Length = 724

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -3

Query: 204 KLFRKRVENLHYVLPQVPSTIGKS 133
           +L   R  N  Y+L QVP+ +G +
Sbjct: 545 RLTLSRKANAQYMLQQVPAIVGSA 568


>AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.
          Length = 1009

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 8/29 (27%), Positives = 15/29 (51%)
 Frame = -1

Query: 122 ILAYDKTHTTASANITXRWNRVHFRQSPY 36
           I+  D  +     + T  W+ +H R++PY
Sbjct: 362 IIVVDVENHLMGESTTIHWHGLHQRRTPY 390


>AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1209

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -3

Query: 210 DAKLFRKRVENLHYVLPQV 154
           D KLF + V+ +H++L  V
Sbjct: 716 DLKLFAETVQKMHHLLKNV 734


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -3

Query: 237  MVYHHNAKYDAKLFRKRVENLHYV 166
            ++ HH     A L R RVEN+  +
Sbjct: 1964 ILLHHGENSVAPLHRHRVENIQKI 1987


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -3

Query: 237  MVYHHNAKYDAKLFRKRVENLHYV 166
            ++ HH     A L R RVEN+  +
Sbjct: 1965 ILLHHGENSVAPLHRHRVENIQKI 1988


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 378,544
Number of Sequences: 2352
Number of extensions: 6937
Number of successful extensions: 14
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 28646721
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)