Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_pT_C03
         (377 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              22   2.1  
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    21   4.8  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   4.8  
DQ667183-1|ABG75735.1|  463|Apis mellifera GABA-gated ion channe...    21   6.4  
Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein RJP...    20   8.4  

>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 22.2 bits (45), Expect = 2.1
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = +2

Query: 50  ESEPDSTLX*C*RKRWCESYHRP 118
           E  P+ST+  C   R C   HRP
Sbjct: 94  ELSPNSTIAVCVCMRKCPRRHRP 116


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 21.0 bits (42), Expect = 4.8
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -2

Query: 310 YISPRRCGDRRMRSP 266
           YI+   CGD R+ SP
Sbjct: 366 YINTAPCGDARIFSP 380


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.0 bits (42), Expect = 4.8
 Identities = 9/40 (22%), Positives = 19/40 (47%)
 Frame = -1

Query: 134 PXQGILAYDKTHTTASANITXRWNRVHFRQSPYEERTRKQ 15
           P Q +  +  TH  A A    +  +   +Q P +++ ++Q
Sbjct: 810 PHQQLHHHQSTHPQAQAQAQPQQQQQQQQQQPQQQQQQQQ 849


>DQ667183-1|ABG75735.1|  463|Apis mellifera GABA-gated ion channel
           protein.
          Length = 463

 Score = 20.6 bits (41), Expect = 6.4
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = -2

Query: 154 AIHHWQVHXREFWPMIRLTPP 92
           A+ HWQ+      P  R TPP
Sbjct: 381 AMGHWQMSCVACSPPPRQTPP 401


>Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein
           RJP57-2 protein.
          Length = 464

 Score = 20.2 bits (40), Expect = 8.4
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = -2

Query: 340 SHFDNETANHY 308
           ++FDN+  NHY
Sbjct: 415 ANFDNQDNNHY 425


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,547
Number of Sequences: 438
Number of extensions: 1854
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  9176370
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)