Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_pT_C02
         (675 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8IK96 Cluster: Putative uncharacterized protein; n=1; ...    33   8.4  

>UniRef50_Q8IK96 Cluster: Putative uncharacterized protein; n=1;
            Plasmodium falciparum 3D7|Rep: Putative uncharacterized
            protein - Plasmodium falciparum (isolate 3D7)
          Length = 4638

 Score = 32.7 bits (71), Expect = 8.4
 Identities = 23/88 (26%), Positives = 43/88 (48%), Gaps = 1/88 (1%)
 Frame = +3

Query: 18   IFTNIKYKLKSTMFIVKTNLTKYILTYSKLHNTYCKKVIRFSNLLN-K*SQCSKYLHQIN 194
            +  +I YK K+ + ++ +    +   Y++L  TY K VI   NL+N K  +  K +H   
Sbjct: 3279 LIVSICYKDKNFLSLLLSKYELFYEEYNELLQTYLKYVINNKNLMNMKKIKNEKMIHTF- 3337

Query: 195  KIMNY**SFLRFKYYHLYINNAN*IYFT 278
                    ++   Y ++Y+N+   I+FT
Sbjct: 3338 -------LYILISYIYIYLNDLYNIFFT 3358


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 556,033,931
Number of Sequences: 1657284
Number of extensions: 10218143
Number of successful extensions: 19020
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 18359
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19010
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 52066120554
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)