Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_pT_C02
         (675 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    27   0.19 
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    25   0.75 
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    22   5.3  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    22   5.3  
AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    21   7.0  

>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 26.6 bits (56), Expect = 0.19
 Identities = 10/26 (38%), Positives = 17/26 (65%)
 Frame = -3

Query: 79  VKFVLTINIVDFSLYLIFVKIYYYHY 2
           + FVL I  +  S+Y+IF  ++Y H+
Sbjct: 164 MNFVLLIGDLHTSIYIIFFDMFYQHH 189


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 24.6 bits (51), Expect = 0.75
 Identities = 8/28 (28%), Positives = 18/28 (64%)
 Frame = -3

Query: 85  YFVKFVLTINIVDFSLYLIFVKIYYYHY 2
           Y    + TI+++ + + +I + IYY++Y
Sbjct: 216 YSAFIIFTIHLLFYCVLIILLCIYYFYY 243



 Score = 23.0 bits (47), Expect = 2.3
 Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
 Frame = -3

Query: 205 FIILLI*CRYLLH*DYLFNRFEKRITFLQYVL*SFE*VKMYFVKFVLTINIVD-FSLYLI 29
           FII  +   +LL   + F  F   I F  ++L  F    ++F   +L +  +D F+L+L+
Sbjct: 153 FIIFTVHLLFLLCIYHFFCAF---IIFTMHLL--FCCAFIFFNMHLLFLLCLDYFTLHLL 207

Query: 28  FVKIYYYHY 2
           F+   YY Y
Sbjct: 208 FLPCIYYFY 216



 Score = 23.0 bits (47), Expect = 2.3
 Identities = 7/28 (25%), Positives = 16/28 (57%)
 Frame = -3

Query: 85  YFVKFVLTINIVDFSLYLIFVKIYYYHY 2
           Y++  +     + F+++L+F+   YY Y
Sbjct: 262 YYMHLLFCCAFIIFTMHLLFLLCIYYFY 289


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 9/18 (50%), Positives = 14/18 (77%)
 Frame = -1

Query: 312 QLVLSFPVKLQK*SIFNL 259
           +LVLS P  ++K +I+NL
Sbjct: 96  ELVLSNPTHMEKSAIYNL 113


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 9/18 (50%), Positives = 14/18 (77%)
 Frame = -1

Query: 312 QLVLSFPVKLQK*SIFNL 259
           +LVLS P  ++K +I+NL
Sbjct: 96  ELVLSNPTHMEKSAIYNL 113


>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 11/31 (35%), Positives = 14/31 (45%)
 Frame = -1

Query: 183 VGTYYIEIICLIDLRNVLLFYSMYCEALSKL 91
           +GT      C   L  VL     YC+ +SKL
Sbjct: 69  MGTIVNAFSCYTVLAPVLCKRQQYCQLMSKL 99


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 146,378
Number of Sequences: 336
Number of extensions: 3165
Number of successful extensions: 14
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17593745
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)