Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P28_pT_B24
(830 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE013599-3998|AAM70802.1| 459|Drosophila melanogaster CG30424-P... 38 0.017
AE013599-2118|AAO41387.1| 394|Drosophila melanogaster CG12970-P... 37 0.029
AE013599-2117|AAF58101.2| 414|Drosophila melanogaster CG12970-P... 37 0.029
BT003651-1|AAO39655.1| 610|Drosophila melanogaster AT10581p pro... 29 7.8
AY069226-1|AAL39371.1| 571|Drosophila melanogaster GH27293p pro... 29 7.8
AJ251543-1|CAB64260.1| 581|Drosophila melanogaster malate dehyd... 29 7.8
AE014134-2139|AAF53150.1| 571|Drosophila melanogaster CG6785-PA... 29 7.8
AE013599-2279|AAO41375.1| 581|Drosophila melanogaster CG7964-PB... 29 7.8
AE013599-2278|AAO41374.1| 610|Drosophila melanogaster CG7964-PC... 29 7.8
AE013599-2277|AAF58000.3| 610|Drosophila melanogaster CG7964-PA... 29 7.8
>AE013599-3998|AAM70802.1| 459|Drosophila melanogaster CG30424-PA
protein.
Length = 459
Score = 37.9 bits (84), Expect = 0.017
Identities = 24/70 (34%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Frame = -2
Query: 829 RLMKKXRDAQ-GMNAIASYFIXTLFLFEIVKVDDITFWSKXSPSKLFKLMVSRLHEVLVS 653
R MKK RD + + SY+I TLFL++I++ + ++W S + M L E L
Sbjct: 271 RFMKKFRDVKTNLGNCKSYYIKTLFLWKIIQEPE-SYWLNPL-SFILADMFDDLAENLRR 328
Query: 652 GKLPYFWNRE 623
G + +FW+ E
Sbjct: 329 GVITFFWDPE 338
>AE013599-2118|AAO41387.1| 394|Drosophila melanogaster CG12970-PB,
isoform B protein.
Length = 394
Score = 37.1 bits (82), Expect = 0.029
Identities = 18/46 (39%), Positives = 30/46 (65%)
Frame = -2
Query: 829 RLMKKXRDAQGMNAIASYFIXTLFLFEIVKVDDITFWSKXSPSKLF 692
RLMK+ R+ + + SY I TLFL+++++ D ++WS SP +F
Sbjct: 255 RLMKQNRNVKNKANLKSYHIKTLFLWQVIQ-QDPSYWSN-SPKDIF 298
>AE013599-2117|AAF58101.2| 414|Drosophila melanogaster CG12970-PA,
isoform A protein.
Length = 414
Score = 37.1 bits (82), Expect = 0.029
Identities = 18/46 (39%), Positives = 30/46 (65%)
Frame = -2
Query: 829 RLMKKXRDAQGMNAIASYFIXTLFLFEIVKVDDITFWSKXSPSKLF 692
RLMK+ R+ + + SY I TLFL+++++ D ++WS SP +F
Sbjct: 275 RLMKQNRNVKNKANLKSYHIKTLFLWQVIQ-QDPSYWSN-SPKDIF 318
>BT003651-1|AAO39655.1| 610|Drosophila melanogaster AT10581p
protein.
Length = 610
Score = 29.1 bits (62), Expect = 7.8
Identities = 14/38 (36%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Frame = +2
Query: 581 TVQYIASDVPKEI-VLSVPEIREFPANEDLVQARHHQL 691
T+ +A+ +P EI +L+ E+ EFP NE++ R + L
Sbjct: 496 TMTVLATRMPDEIFLLAAHELAEFPTNEEMQSGRIYPL 533
>AY069226-1|AAL39371.1| 571|Drosophila melanogaster GH27293p
protein.
Length = 571
Score = 29.1 bits (62), Expect = 7.8
Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
Frame = +1
Query: 463 RESSPYIPL-APNSLRDSPLPEDSHPAAAGS--RLRASTSP 576
+++ PY AP S + P P +HPAA G+ +L+AS +P
Sbjct: 180 QQARPYDSFYAPWSYKQQPAPVATHPAAEGNNRKLQASLAP 220
>AJ251543-1|CAB64260.1| 581|Drosophila melanogaster malate
dehydrogenase (NADP-dependentoxaloacetate
decarboxylating), malic enzyme protein.
Length = 581
Score = 29.1 bits (62), Expect = 7.8
Identities = 14/38 (36%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Frame = +2
Query: 581 TVQYIASDVPKEI-VLSVPEIREFPANEDLVQARHHQL 691
T+ +A+ +P EI +L+ E+ EFP NE++ R + L
Sbjct: 496 TMTVLATRMPDEIFLLAAHELAEFPTNEEMQSGRIYPL 533
>AE014134-2139|AAF53150.1| 571|Drosophila melanogaster CG6785-PA
protein.
Length = 571
Score = 29.1 bits (62), Expect = 7.8
Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
Frame = +1
Query: 463 RESSPYIPL-APNSLRDSPLPEDSHPAAAGS--RLRASTSP 576
+++ PY AP S + P P +HPAA G+ +L+AS +P
Sbjct: 180 QQARPYDSFYAPWSYKQQPAPVATHPAAEGNNRKLQASLAP 220
>AE013599-2279|AAO41375.1| 581|Drosophila melanogaster CG7964-PB,
isoform B protein.
Length = 581
Score = 29.1 bits (62), Expect = 7.8
Identities = 14/38 (36%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Frame = +2
Query: 581 TVQYIASDVPKEI-VLSVPEIREFPANEDLVQARHHQL 691
T+ +A+ +P EI +L+ E+ EFP NE++ R + L
Sbjct: 496 TMTVLATRMPDEIFLLAAHELAEFPTNEEMQSGRIYPL 533
>AE013599-2278|AAO41374.1| 610|Drosophila melanogaster CG7964-PC,
isoform C protein.
Length = 610
Score = 29.1 bits (62), Expect = 7.8
Identities = 14/38 (36%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Frame = +2
Query: 581 TVQYIASDVPKEI-VLSVPEIREFPANEDLVQARHHQL 691
T+ +A+ +P EI +L+ E+ EFP NE++ R + L
Sbjct: 496 TMTVLATRMPDEIFLLAAHELAEFPTNEEMQSGRIYPL 533
>AE013599-2277|AAF58000.3| 610|Drosophila melanogaster CG7964-PA,
isoform A protein.
Length = 610
Score = 29.1 bits (62), Expect = 7.8
Identities = 14/38 (36%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Frame = +2
Query: 581 TVQYIASDVPKEI-VLSVPEIREFPANEDLVQARHHQL 691
T+ +A+ +P EI +L+ E+ EFP NE++ R + L
Sbjct: 496 TMTVLATRMPDEIFLLAAHELAEFPTNEEMQSGRIYPL 533
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,157,878
Number of Sequences: 53049
Number of extensions: 630777
Number of successful extensions: 1818
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1763
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1818
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3942192384
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -