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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_pT_B13
         (772 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_05_0295 - 23912502-23912507,23912631-23912712,23913020-239131...   152   3e-37
01_01_1138 - 9019049-9019159,9019525-9019606,9020059-9020177,902...   149   2e-36
07_01_0844 + 6855195-6855342,6855752-6855802,6856460-6856530,685...   147   1e-35
07_01_0842 + 6840943-6841288,6841800-6841970,6842762-6842832,684...   147   1e-35
03_06_0420 + 33794045-33794192,33794831-33794901,33795093-337952...   147   1e-35
01_06_1108 + 34574299-34574446,34575000-34575070,34575246-345753...   142   4e-34
11_06_0218 + 21361975-21362314,21362463-21362545,21363870-213639...   102   3e-22
10_08_1062 + 22626262-22626318,22626404-22626494,22626601-226267...    99   4e-21
02_05_0413 + 28773869-28773925,28774045-28774135,28774515-287746...    99   4e-21
08_01_0921 + 9075409-9075511,9075606-9075689,9075744-9075806,907...    84   1e-16
06_01_0098 + 818374-818427,818537-818627,818753-818868,818962-81...    83   2e-16
03_03_0224 + 15580944-15581036,15581630-15581770,15582385-155824...    63   3e-10
07_03_1298 - 25592788-25592890,25593126-25593229,25593747-255938...    60   2e-09
02_02_0711 - 13180406-13180423,13180483-13180563,13181026-131811...    41   0.001
01_03_0154 + 13269335-13269463,13269597-13269728,13270704-13271024     38   0.007
12_02_0764 - 22973675-22973995,22975626-22975757,22977074-22977202     38   0.009
06_01_0853 + 6486027-6486158,6486561-6486692,6486974-6486978,648...    38   0.009
01_01_1068 - 8413269-8413589,8414011-8414262,8417472-8417603,841...    37   0.016
02_01_0226 + 1476529-1476585,1477207-1477297,1478247-1478362,147...    37   0.020
11_01_0455 + 3517281-3519798,3519888-3520261                           31   1.3  
01_06_1603 - 38564330-38564341,38564608-38564835                       30   1.8  
09_04_0237 - 15936630-15937250,15937457-15937534,15938874-159389...    29   5.4  
04_04_1184 + 31558678-31558707,31559485-31559644,31559732-315603...    29   5.4  
05_06_0248 + 26673107-26674351                                         28   7.2  
04_03_0286 + 13915705-13915984,13916478-13917062,13918188-139186...    28   7.2  
08_01_0412 + 3675767-3676069,3676627-3677877                           28   9.5  
03_05_0434 + 24252994-24253449,24254791-24254877,24255450-242557...    28   9.5  
01_06_0065 + 26107522-26107700,26110875-26111253                       28   9.5  

>05_05_0295 -
           23912502-23912507,23912631-23912712,23913020-23913138,
           23913480-23913599,23913927-23913997,23914525-23914672
          Length = 181

 Score =  152 bits (369), Expect = 3e-37
 Identities = 69/84 (82%), Positives = 77/84 (91%)
 Frame = -3

Query: 770 DRXRIGEAREELMRMLSEDEXRDAVLLIFANKQDLPNAMNAAEITDKLGLHSLRNRNWYI 591
           DR R+ EAR+EL RML+EDE RDAVLL+FANKQDLPNAMNAAEITDKLGLHSLR R+WYI
Sbjct: 96  DRERVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYI 155

Query: 590 QATCATSGDGLYEGLDWLSNQLKN 519
           Q+TCATSG+GLYEGLDWLSN + N
Sbjct: 156 QSTCATSGEGLYEGLDWLSNNIAN 179


>01_01_1138 -
           9019049-9019159,9019525-9019606,9020059-9020177,
           9020977-9021096,9021313-9021383,9021801-9021948
          Length = 216

 Score =  149 bits (361), Expect = 2e-36
 Identities = 67/84 (79%), Positives = 77/84 (91%)
 Frame = -3

Query: 770 DRXRIGEAREELMRMLSEDEXRDAVLLIFANKQDLPNAMNAAEITDKLGLHSLRNRNWYI 591
           DR R+ EAR+EL RML+EDE RDAVLL+FANKQDLPNAMNAAEITDKLGLHSLR R+WYI
Sbjct: 96  DRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYI 155

Query: 590 QATCATSGDGLYEGLDWLSNQLKN 519
           Q+TCAT+G+GLYEGLDWLS+ + N
Sbjct: 156 QSTCATTGEGLYEGLDWLSSNIAN 179


>07_01_0844 +
           6855195-6855342,6855752-6855802,6856460-6856530,
           6856736-6856855,6857043-6857161,6857377-6857458,
           6857592-6857597
          Length = 198

 Score =  147 bits (356), Expect = 1e-35
 Identities = 66/82 (80%), Positives = 76/82 (92%)
 Frame = -3

Query: 770 DRXRIGEAREELMRMLSEDEXRDAVLLIFANKQDLPNAMNAAEITDKLGLHSLRNRNWYI 591
           DR R+ EAR+EL RML+EDE RDAVLL+FANKQDLPNAMNAAEITDKLGLHSLR R+WYI
Sbjct: 113 DRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYI 172

Query: 590 QATCATSGDGLYEGLDWLSNQL 525
           Q+TCAT+G+GLYEGLDWLS+ +
Sbjct: 173 QSTCATTGEGLYEGLDWLSSNI 194


>07_01_0842 +
           6840943-6841288,6841800-6841970,6842762-6842832,
           6843068-6843187,6843654-6843772,6844045-6844126,
           6844254-6844259
          Length = 304

 Score =  147 bits (356), Expect = 1e-35
 Identities = 66/82 (80%), Positives = 76/82 (92%)
 Frame = -3

Query: 770 DRXRIGEAREELMRMLSEDEXRDAVLLIFANKQDLPNAMNAAEITDKLGLHSLRNRNWYI 591
           DR R+ EAR+EL RML+EDE RDAVLL+FANKQDLPNAMNAAEITDKLGLHSLR R+WYI
Sbjct: 219 DRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYI 278

Query: 590 QATCATSGDGLYEGLDWLSNQL 525
           Q+TCAT+G+GLYEGLDWLS+ +
Sbjct: 279 QSTCATTGEGLYEGLDWLSSNI 300


>03_06_0420 +
           33794045-33794192,33794831-33794901,33795093-33795212,
           33795466-33795584,33795775-33795856,33795984-33795989
          Length = 181

 Score =  147 bits (356), Expect = 1e-35
 Identities = 66/82 (80%), Positives = 76/82 (92%)
 Frame = -3

Query: 770 DRXRIGEAREELMRMLSEDEXRDAVLLIFANKQDLPNAMNAAEITDKLGLHSLRNRNWYI 591
           DR R+ EAR+EL RML+EDE RDAVLL+FANKQDLPNAMNAAEITDKLGLHSLR R+WYI
Sbjct: 96  DRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYI 155

Query: 590 QATCATSGDGLYEGLDWLSNQL 525
           Q+TCAT+G+GLYEGLDWLS+ +
Sbjct: 156 QSTCATTGEGLYEGLDWLSSNI 177


>01_06_1108 +
           34574299-34574446,34575000-34575070,34575246-34575365,
           34575471-34575488,34575708-34575826,34576244-34576325,
           34576537-34576542
          Length = 187

 Score =  142 bits (343), Expect = 4e-34
 Identities = 68/88 (77%), Positives = 76/88 (86%), Gaps = 6/88 (6%)
 Frame = -3

Query: 770 DRXRIGEAREELMRMLSE------DEXRDAVLLIFANKQDLPNAMNAAEITDKLGLHSLR 609
           DR R+ EAR+EL RML+E      DE RDAVLL+FANKQDLPNAMNAAEITDKLGLHSLR
Sbjct: 96  DRERVVEARDELHRMLNELQNWKKDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLR 155

Query: 608 NRNWYIQATCATSGDGLYEGLDWLSNQL 525
            R+WYIQ+TCATSG+GLYEGLDWLSN +
Sbjct: 156 QRHWYIQSTCATSGEGLYEGLDWLSNNI 183


>11_06_0218 +
           21361975-21362314,21362463-21362545,21363870-21363965,
           21364451-21364813
          Length = 293

 Score =  102 bits (245), Expect = 3e-22
 Identities = 43/82 (52%), Positives = 63/82 (76%)
 Frame = -3

Query: 770 DRXRIGEAREELMRMLSEDEXRDAVLLIFANKQDLPNAMNAAEITDKLGLHSLRNRNWYI 591
           DR RI   ++EL R+L   +   AV+L+FANKQDL +AM+ AEITD L LHS++N +W+I
Sbjct: 205 DRARINIIKDELFRLLQHGDLEGAVVLVFANKQDLKDAMSPAEITDALSLHSIKNHDWHI 264

Query: 590 QATCATSGDGLYEGLDWLSNQL 525
           QA+CA +G+GLY+GL W++ ++
Sbjct: 265 QASCAITGEGLYDGLGWIAQKV 286


>10_08_1062 +
           22626262-22626318,22626404-22626494,22626601-22626716,
           22627035-22627094,22627204-22627269,22627726-22627914
          Length = 192

 Score = 98.7 bits (235), Expect = 4e-21
 Identities = 44/82 (53%), Positives = 57/82 (69%)
 Frame = -3

Query: 770 DRXRIGEAREELMRMLSEDEXRDAVLLIFANKQDLPNAMNAAEITDKLGLHSLRNRNWYI 591
           DR RIG AR E   ++++    ++VLL+FANKQD+  AM   E+ + LGL+ L NR W+I
Sbjct: 96  DRERIGRARAEFQAIINDPFMLNSVLLVFANKQDMRGAMTPMEVCEGLGLYDLNNRIWHI 155

Query: 590 QATCATSGDGLYEGLDWLSNQL 525
           Q TCA  GDGLYEGLDWL+  L
Sbjct: 156 QGTCALKGDGLYEGLDWLATTL 177


>02_05_0413 +
           28773869-28773925,28774045-28774135,28774515-28774630,
           28775627-28775686,28775767-28775832,28776499-28776693
          Length = 194

 Score = 98.7 bits (235), Expect = 4e-21
 Identities = 42/83 (50%), Positives = 61/83 (73%)
 Frame = -3

Query: 770 DRXRIGEAREELMRMLSEDEXRDAVLLIFANKQDLPNAMNAAEITDKLGLHSLRNRNWYI 591
           DR RIG+A+ E   ++++    ++V+L+FANKQD+  AM   E+ + LGL+ L+NR W+I
Sbjct: 96  DRERIGKAKAEFQAIVNDPLMLNSVILVFANKQDMKGAMTPLEVCEGLGLYDLKNRIWHI 155

Query: 590 QATCATSGDGLYEGLDWLSNQLK 522
           Q +CA  GDGLYEGLDWL++ LK
Sbjct: 156 QGSCALKGDGLYEGLDWLASTLK 178


>08_01_0921 +
           9075409-9075511,9075606-9075689,9075744-9075806,
           9077163-9077181,9078227-9078338,9078902-9078949,
           9079372-9079502,9079673-9079757,9079776-9079784
          Length = 217

 Score = 83.8 bits (198), Expect = 1e-16
 Identities = 38/76 (50%), Positives = 53/76 (69%)
 Frame = -3

Query: 770 DRXRIGEAREELMRMLSEDEXRDAVLLIFANKQDLPNAMNAAEITDKLGLHSLRNRNWYI 591
           D  R+  A+EE   +L EDE + AV+L++ANKQDLP A++ A IT+ L LH +++R W I
Sbjct: 111 DTDRLVTAKEEFHAILEEDELKGAVVLVYANKQDLPGALDDAAITESLELHKIKSRQWAI 170

Query: 590 QATCATSGDGLYEGLD 543
             T A  G+GL+EGLD
Sbjct: 171 FKTSAIKGEGLFEGLD 186


>06_01_0098 +
           818374-818427,818537-818627,818753-818868,818962-819087,
           819175-819357
          Length = 189

 Score = 83.4 bits (197), Expect = 2e-16
 Identities = 37/85 (43%), Positives = 59/85 (69%), Gaps = 1/85 (1%)
 Frame = -3

Query: 770 DRXRIGEAREELMRMLSEDEXRDAVLLIFANKQDLPNAMNAAEITDKLGLH-SLRNRNWY 594
           DR RIG A+EE   ++ +    ++V+L+ ANKQDL  AM+++E+  +LG +  L+NR W+
Sbjct: 95  DRERIGVAKEEFQAIIRDPLMLNSVILLLANKQDLKGAMSSSEVCQRLGAYEELKNRRWH 154

Query: 593 IQATCATSGDGLYEGLDWLSNQLKN 519
            Q   A +GDGL+ GLDWL++ L++
Sbjct: 155 CQGASALTGDGLHGGLDWLASTLRD 179


>03_03_0224 +
           15580944-15581036,15581630-15581770,15582385-15582493,
           15582598-15582659,15583704-15583807,15584058-15584160
          Length = 203

 Score = 62.9 bits (146), Expect = 3e-10
 Identities = 32/89 (35%), Positives = 49/89 (55%)
 Frame = -3

Query: 752 EAREELMRMLSEDEXRDAVLLIFANKQDLPNAMNAAEITDKLGLHSLRNRNWYIQATCAT 573
           +A+  L ++L  ++ + A LLIFANKQDLP  +   E+   L L  L  R +  QA  A 
Sbjct: 109 DAKSALEKVLRHEDLKGAPLLIFANKQDLPGVITDEELARYLQLKELDERPYKFQAVSAY 168

Query: 572 SGDGLYEGLDWLSNQLKNANR*PYVRQLA 486
            G G+  G+DW+  Q++ + R   +R  A
Sbjct: 169 DGRGIKSGIDWVVEQMERSKRTEVLRARA 197


>07_03_1298 -
           25592788-25592890,25593126-25593229,25593747-25593808,
           25593957-25594065,25594215-25594355,25594707-25594769,
           25594974-25595084,25596140-25596457
          Length = 336

 Score = 60.1 bits (139), Expect = 2e-09
 Identities = 29/81 (35%), Positives = 46/81 (56%)
 Frame = -3

Query: 752 EAREELMRMLSEDEXRDAVLLIFANKQDLPNAMNAAEITDKLGLHSLRNRNWYIQATCAT 573
           +A+  L ++L  ++ +   LLIFANKQ+LP A+   E+   L L  L  R +  QA  A 
Sbjct: 242 DAKSALEKVLHHEDLQGVPLLIFANKQELPAAVTEEELARHLHLKGLDERPYMFQAGSAY 301

Query: 572 SGDGLYEGLDWLSNQLKNANR 510
            G G+  G+DWL  +++ + R
Sbjct: 302 DGTGIKAGIDWLVEEMERSKR 322


>02_02_0711 -
           13180406-13180423,13180483-13180563,13181026-13181188,
           13182096-13182206,13182365-13182429
          Length = 145

 Score = 41.1 bits (92), Expect = 0.001
 Identities = 19/44 (43%), Positives = 27/44 (61%)
 Frame = -3

Query: 770 DRXRIGEAREELMRMLSEDEXRDAVLLIFANKQDLPNAMNAAEI 639
           D  R+ + R EL  +L E+    A LL+FANKQD+  A+  +EI
Sbjct: 95  DIRRLDDCRAELHNLLKEERLAGASLLVFANKQDIQGALKPSEI 138


>01_03_0154 + 13269335-13269463,13269597-13269728,13270704-13271024
          Length = 193

 Score = 38.3 bits (85), Expect = 0.007
 Identities = 19/50 (38%), Positives = 28/50 (56%)
 Frame = -3

Query: 770 DRXRIGEAREELMRMLSEDEXRDAVLLIFANKQDLPNAMNAAEITDKLGL 621
           D+ R  E+++EL  +LS+D       LI  NK D+P A +  E+   LGL
Sbjct: 99  DKERFAESKKELDALLSDDSLAAVPFLILGNKIDIPYAASEEELRYHLGL 148


>12_02_0764 - 22973675-22973995,22975626-22975757,22977074-22977202
          Length = 193

 Score = 37.9 bits (84), Expect = 0.009
 Identities = 18/50 (36%), Positives = 28/50 (56%)
 Frame = -3

Query: 770 DRXRIGEAREELMRMLSEDEXRDAVLLIFANKQDLPNAMNAAEITDKLGL 621
           D+ R  E+++EL  +LS+D       LI  NK D+P A +  E+   +GL
Sbjct: 99  DKERFSESKKELDALLSDDSLATVPFLILGNKIDIPYAASEEELRYHMGL 148


>06_01_0853 +
           6486027-6486158,6486561-6486692,6486974-6486978,
           6487948-6488017,6489456-6489776
          Length = 219

 Score = 37.9 bits (84), Expect = 0.009
 Identities = 20/53 (37%), Positives = 28/53 (52%)
 Frame = -3

Query: 770 DRXRIGEAREELMRMLSEDEXRDAVLLIFANKQDLPNAMNAAEITDKLGLHSL 612
           DR R  E++ EL  +LS+D       L+  NK D+P A+   E+   LGL  L
Sbjct: 125 DRCRFAESKMELDALLSDDALAGVPFLVLGNKIDIPYAVPEQELCYYLGLTGL 177


>01_01_1068 -
           8413269-8413589,8414011-8414262,8417472-8417603,
           8417684-8417812
          Length = 277

 Score = 37.1 bits (82), Expect = 0.016
 Identities = 18/50 (36%), Positives = 28/50 (56%)
 Frame = -3

Query: 770 DRXRIGEAREELMRMLSEDEXRDAVLLIFANKQDLPNAMNAAEITDKLGL 621
           D+ R  E+++EL  +L++D       LI  NK D+P A +  E+   LGL
Sbjct: 183 DKERFAESKKELDALLADDSLATVPFLILGNKIDIPYAASEEELRYYLGL 232


>02_01_0226 +
           1476529-1476585,1477207-1477297,1478247-1478362,
           1478834-1478893,1479000-1479065,1479847-1480047
          Length = 196

 Score = 36.7 bits (81), Expect = 0.020
 Identities = 15/35 (42%), Positives = 25/35 (71%)
 Frame = -3

Query: 770 DRXRIGEAREELMRMLSEDEXRDAVLLIFANKQDL 666
           DR RI +AR+E   ++ +    ++++L+FANKQDL
Sbjct: 96  DRERIIDARQEFQTIIKDPLMANSIILVFANKQDL 130


>11_01_0455 + 3517281-3519798,3519888-3520261
          Length = 963

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 14/21 (66%), Positives = 14/21 (66%)
 Frame = -1

Query: 376 LVTEGAPHSFRTRCNTARCVR 314
           L TEGA HSF T CN  R VR
Sbjct: 682 LETEGAEHSFITECNALRKVR 702


>01_06_1603 - 38564330-38564341,38564608-38564835
          Length = 79

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 13/48 (27%), Positives = 21/48 (43%)
 Frame = -1

Query: 631 NWVCIRCATVTGTSKRHAPLPETDCTRVSTGSPISSRTPTANRMCANS 488
           +W+C+      G S   APL +  C  ++TG+    R    N    +S
Sbjct: 22  HWMCLHVPFTVGASVPFAPLIKPTCVEIATGAFAPERQTICNESSESS 69


>09_04_0237 -
           15936630-15937250,15937457-15937534,15938874-15938973,
           15940414-15942278
          Length = 887

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 16/71 (22%), Positives = 30/71 (42%)
 Frame = -1

Query: 613 CATVTGTSKRHAPLPETDCTRVSTGSPISSRTPTANRMCANSQTNLIIERDYGLRYVNFI 434
           CAT  G           DC++    + +  +     R  A  +  +++ER  G R ++  
Sbjct: 564 CATCGGEWSTADDADHRDCSKGPEAAMVK-KLADERRWKACPKCRMLVERTAGCRVMSCR 622

Query: 433 CY*IQCIMCGI 401
           C  + C +CG+
Sbjct: 623 CRMVFCYLCGL 633


>04_04_1184 +
           31558678-31558707,31559485-31559644,31559732-31560394,
           31560512-31560956,31561090-31561171,31561319-31561534
          Length = 531

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 14/46 (30%), Positives = 22/46 (47%)
 Frame = -1

Query: 619 IRCATVTGTSKRHAPLPETDCTRVSTGSPISSRTPTANRMCANSQT 482
           +   +V        P+P  D +R  TG+P+ S TPT +  C+   T
Sbjct: 289 VHSVSVRDVGTEMTPIPSQDPSR--TGTPLGSMTPTRSPNCSIPST 332


>05_06_0248 + 26673107-26674351
          Length = 414

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 15/43 (34%), Positives = 21/43 (48%)
 Frame = +1

Query: 46  TMCAHTGXMLHLFLPPLSDKIKKKNKIVGNSPTLHTIFCSTSS 174
           T CA +       LPP   K+ +K  +VG SPT  T   S ++
Sbjct: 169 TPCAVSTTTTTTALPPSKRKLPEKYPVVGTSPTTKTTTTSETA 211


>04_03_0286 +
           13915705-13915984,13916478-13917062,13918188-13918661,
           13918963-13920208,13920282-13920297
          Length = 866

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = +3

Query: 558 QSVSGSGACRLDVPVTVAQRMQTQFV 635
           Q  +G+G C +DVP+  AQ +Q  FV
Sbjct: 171 QDCNGTGCCSIDVPIR-AQTLQLMFV 195


>08_01_0412 + 3675767-3676069,3676627-3677877
          Length = 517

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 12/37 (32%), Positives = 19/37 (51%)
 Frame = -3

Query: 371 DRRRAAFVPNQMQYGTLCALKYCFSKYYINYVYLNAI 261
           D +RA   PN++ YG L         Y +++ Y+ AI
Sbjct: 244 DMKRAKVEPNEITYGILAIAHAVARLYTVSHTYVEAI 280


>03_05_0434 +
           24252994-24253449,24254791-24254877,24255450-24255748,
           24256146-24256383,24256907-24257441,24257527-24257729,
           24258311-24258520
          Length = 675

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 11/33 (33%), Positives = 20/33 (60%)
 Frame = -1

Query: 532 ISSRTPTANRMCANSQTNLIIERDYGLRYVNFI 434
           ++++   ANR C + QTN++ ++D  L    FI
Sbjct: 502 LTAQLSDANRSCTSGQTNVVPQKDVNLYKDTFI 534


>01_06_0065 + 26107522-26107700,26110875-26111253
          Length = 185

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 19/69 (27%), Positives = 32/69 (46%)
 Frame = -3

Query: 767 RXRIGEAREELMRMLSEDEXRDAVLLIFANKQDLPNAMNAAEITDKLGLHSLRNRNWYIQ 588
           R + G+     +R  +    R  VL++F  ++ +     A E  + +G  +LR   W+  
Sbjct: 60  RSKRGDIVLAALRRSARRGTRRFVLMLFRRQRLVAAEKEADEEEEDIGT-ALRRSAWWAT 118

Query: 587 ATCATSGDG 561
            T AT GDG
Sbjct: 119 QTQATPGDG 127


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,444,722
Number of Sequences: 37544
Number of extensions: 417690
Number of successful extensions: 1071
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1041
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1068
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2075009728
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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