Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P28_pT_B13
(772 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U32305-19|AAK18851.1| 181|Caenorhabditis elegans Adp-ribosylati... 167 6e-42
AY519855-1|AAR89636.1| 180|Caenorhabditis elegans ADP-ribosylat... 144 8e-35
AF045644-6|AAC02598.1| 180|Caenorhabditis elegans Adp-ribosylat... 144 8e-35
AL117204-5|CAB55153.1| 175|Caenorhabditis elegans Hypothetical ... 109 2e-24
U70852-7|AAK29813.1| 179|Caenorhabditis elegans Adp-ribosylatio... 98 5e-21
Z49967-8|CAA90255.1| 180|Caenorhabditis elegans Hypothetical pr... 84 9e-17
Z22181-6|CAA80185.1| 178|Caenorhabditis elegans Hypothetical pr... 83 3e-16
Z93378-2|CAB07583.1| 184|Caenorhabditis elegans Hypothetical pr... 80 1e-15
Z50044-1|CAA90353.2| 184|Caenorhabditis elegans Hypothetical pr... 74 1e-13
Z46241-6|CAA86319.1| 190|Caenorhabditis elegans Hypothetical pr... 66 3e-11
Z99281-8|CAB16514.1| 185|Caenorhabditis elegans Hypothetical pr... 46 2e-05
AB185209-1|BAD30093.1| 185|Caenorhabditis elegans novel small G... 46 2e-05
U80847-2|AAB37982.2| 475|Caenorhabditis elegans Hypothetical pr... 30 2.1
AF068716-1|AAC17747.1| 247|Caenorhabditis elegans Hypothetical ... 29 2.8
Z81563-3|CAB04565.1| 222|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z66496-6|CAA91281.3| 191|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z48585-12|CAI46589.1| 191|Caenorhabditis elegans Hypothetical p... 29 3.7
Z50029-8|CAA90342.2| 668|Caenorhabditis elegans Hypothetical pr... 28 6.4
U80023-10|AAG24042.1| 97|Caenorhabditis elegans Hypothetical p... 28 6.4
Z82268-12|CAL64003.1| 1210|Caenorhabditis elegans Hypothetical p... 28 8.5
Z82268-10|CAB05202.1| 972|Caenorhabditis elegans Hypothetical p... 28 8.5
AL021476-3|CAL63996.1| 1210|Caenorhabditis elegans Hypothetical ... 28 8.5
AL021476-1|CAA16317.1| 972|Caenorhabditis elegans Hypothetical ... 28 8.5
>U32305-19|AAK18851.1| 181|Caenorhabditis elegans Adp-ribosylation
factor relatedprotein 1.2 protein.
Length = 181
Score = 167 bits (407), Expect = 6e-42
Identities = 76/84 (90%), Positives = 81/84 (96%)
Frame = -3
Query: 770 DRXRIGEAREELMRMLSEDEXRDAVLLIFANKQDLPNAMNAAEITDKLGLHSLRNRNWYI 591
DR R+GEAREELMRML+EDE RDAVLL+FANKQDLP AMNAAE+TDKLGLHSLRNR+WYI
Sbjct: 96 DRERVGEAREELMRMLAEDELRDAVLLVFANKQDLPQAMNAAEVTDKLGLHSLRNRSWYI 155
Query: 590 QATCATSGDGLYEGLDWLSNQLKN 519
QATCATSGDGLYEGLDWLSNQLKN
Sbjct: 156 QATCATSGDGLYEGLDWLSNQLKN 179
>AY519855-1|AAR89636.1| 180|Caenorhabditis elegans ADP-ribosylation
factor related(20.5 kD) (arf-3) protein.
Length = 180
Score = 144 bits (348), Expect = 8e-35
Identities = 65/82 (79%), Positives = 73/82 (89%)
Frame = -3
Query: 770 DRXRIGEAREELMRMLSEDEXRDAVLLIFANKQDLPNAMNAAEITDKLGLHSLRNRNWYI 591
D+ RI E+REEL +ML+EDE RDA LL+FANKQDLPNAM AAE+TDKLGLH+LR+R WYI
Sbjct: 96 DKERIEESREELHKMLNEDELRDATLLVFANKQDLPNAMTAAELTDKLGLHNLRSRQWYI 155
Query: 590 QATCATSGDGLYEGLDWLSNQL 525
QATCAT G GLYEGLDWLSNQL
Sbjct: 156 QATCATQGHGLYEGLDWLSNQL 177
>AF045644-6|AAC02598.1| 180|Caenorhabditis elegans Adp-ribosylation
factor relatedprotein 3 protein.
Length = 180
Score = 144 bits (348), Expect = 8e-35
Identities = 65/82 (79%), Positives = 73/82 (89%)
Frame = -3
Query: 770 DRXRIGEAREELMRMLSEDEXRDAVLLIFANKQDLPNAMNAAEITDKLGLHSLRNRNWYI 591
D+ RI E+REEL +ML+EDE RDA LL+FANKQDLPNAM AAE+TDKLGLH+LR+R WYI
Sbjct: 96 DKERIEESREELHKMLNEDELRDATLLVFANKQDLPNAMTAAELTDKLGLHNLRSRQWYI 155
Query: 590 QATCATSGDGLYEGLDWLSNQL 525
QATCAT G GLYEGLDWLSNQL
Sbjct: 156 QATCATQGHGLYEGLDWLSNQL 177
>AL117204-5|CAB55153.1| 175|Caenorhabditis elegans Hypothetical
protein Y116A8C.12 protein.
Length = 175
Score = 109 bits (262), Expect = 2e-24
Identities = 47/83 (56%), Positives = 65/83 (78%)
Frame = -3
Query: 770 DRXRIGEAREELMRMLSEDEXRDAVLLIFANKQDLPNAMNAAEITDKLGLHSLRNRNWYI 591
DR R+ EAR EL R++++ E ++A++L+FANKQDL +AM EI DKLGL +R+RNWY+
Sbjct: 92 DRDRVDEARMELHRIINDREMKEAIILVFANKQDLADAMKPHEIQDKLGLTRIRDRNWYV 151
Query: 590 QATCATSGDGLYEGLDWLSNQLK 522
Q +CA++GDGL+EGL WLS K
Sbjct: 152 QPSCASTGDGLHEGLTWLSQNCK 174
>U70852-7|AAK29813.1| 179|Caenorhabditis elegans Adp-ribosylation
factor relatedprotein 1.1 protein.
Length = 179
Score = 98.3 bits (234), Expect = 5e-21
Identities = 47/83 (56%), Positives = 59/83 (71%)
Frame = -3
Query: 770 DRXRIGEAREELMRMLSEDEXRDAVLLIFANKQDLPNAMNAAEITDKLGLHSLRNRNWYI 591
D RI EA+EEL +L+E E D+ LL+FANKQD+PNA + AE+T L L SL+NR W+I
Sbjct: 96 DIERIPEAKEELFSLLAEPELADSHLLVFANKQDMPNARSPAELTQLLDLGSLKNREWFI 155
Query: 590 QATCATSGDGLYEGLDWLSNQLK 522
T A SG GLYEGL W+ Q+K
Sbjct: 156 CGTNAHSGQGLYEGLMWVKKQMK 178
>Z49967-8|CAA90255.1| 180|Caenorhabditis elegans Hypothetical
protein F54C9.10 protein.
Length = 180
Score = 84.2 bits (199), Expect = 9e-17
Identities = 40/83 (48%), Positives = 54/83 (65%)
Frame = -3
Query: 770 DRXRIGEAREELMRMLSEDEXRDAVLLIFANKQDLPNAMNAAEITDKLGLHSLRNRNWYI 591
DR R+G +R+EL ML EDE + AVL + ANKQD+ + E+ LGL +LRNR I
Sbjct: 95 DRDRVGISRQELATMLQEDELQGAVLAVLANKQDIAGCLTETEVYKALGLDALRNRTIQI 154
Query: 590 QATCATSGDGLYEGLDWLSNQLK 522
T A+ G+GL +DWL+NQL+
Sbjct: 155 FKTSASKGEGLDPAMDWLANQLQ 177
>Z22181-6|CAA80185.1| 178|Caenorhabditis elegans Hypothetical
protein ZK632.8 protein.
Length = 178
Score = 82.6 bits (195), Expect = 3e-16
Identities = 39/83 (46%), Positives = 53/83 (63%), Gaps = 1/83 (1%)
Frame = -3
Query: 770 DRXRIGEAREELMRMLSEDEXRDAVLLIFANKQDLPNAMNAAEITDKLGLHSLRN-RNWY 594
D RI +E+L ML ++ A +L+ ANKQDLP AMN AE++ +LGL +LR R W
Sbjct: 96 DTTRIPIMKEQLHNMLQHEDLARAHILVLANKQDLPGAMNPAEVSTQLGLQTLRGARKWQ 155
Query: 593 IQATCATSGDGLYEGLDWLSNQL 525
I CA G+GL E L+W++N L
Sbjct: 156 INGCCAVKGEGLPEALEWIANNL 178
>Z93378-2|CAB07583.1| 184|Caenorhabditis elegans Hypothetical
protein F19H8.3 protein.
Length = 184
Score = 80.2 bits (189), Expect = 1e-15
Identities = 38/87 (43%), Positives = 56/87 (64%)
Frame = -3
Query: 770 DRXRIGEAREELMRMLSEDEXRDAVLLIFANKQDLPNAMNAAEITDKLGLHSLRNRNWYI 591
D+ R E EL +L E++ R +LIFANKQDL A ++ EIT KL L LR+R W+I
Sbjct: 97 DKKRFDEMNIELGELLDEEKLRKVPVLIFANKQDLVTAASSEEITRKLNLDLLRDRTWHI 156
Query: 590 QATCATSGDGLYEGLDWLSNQLKNANR 510
QA A +G+ +G+ W+++ LK A++
Sbjct: 157 QACSALKNEGINDGITWVASNLKPASK 183
>Z50044-1|CAA90353.2| 184|Caenorhabditis elegans Hypothetical
protein F22B5.1 protein.
Length = 184
Score = 73.7 bits (173), Expect = 1e-13
Identities = 33/82 (40%), Positives = 50/82 (60%)
Frame = -3
Query: 770 DRXRIGEAREELMRMLSEDEXRDAVLLIFANKQDLPNAMNAAEITDKLGLHSLRNRNWYI 591
DR R+ + EEL ++L E+ A LL+ ANK DLP A++ I L LHS+++ +W I
Sbjct: 95 DRERLLQCSEELKKLLGEERLAGASLLVLANKSDLPGAIDVNSIAQVLDLHSIKSHHWKI 154
Query: 590 QATCATSGDGLYEGLDWLSNQL 525
+ CA SGD L + + WL + +
Sbjct: 155 FSCCALSGDRLVQAMTWLCDDV 176
>Z46241-6|CAA86319.1| 190|Caenorhabditis elegans Hypothetical
protein C38D4.8 protein.
Length = 190
Score = 66.1 bits (154), Expect = 3e-11
Identities = 33/84 (39%), Positives = 52/84 (61%), Gaps = 2/84 (2%)
Frame = -3
Query: 770 DRXRIGEAREELMRMLSEDEX--RDAVLLIFANKQDLPNAMNAAEITDKLGLHSLRNRNW 597
DR R+ ++ELM ++ + R ++I ANK D+P AM A++IT LGL+ R+ W
Sbjct: 98 DRLRMELLKDELMMVMEHKDVVSRGIPIVILANKMDIPGAMTASDITVALGLNLYRSGTW 157
Query: 596 YIQATCATSGDGLYEGLDWLSNQL 525
I +TCA +GDGL + + LS ++
Sbjct: 158 SIHSTCALTGDGLDKAMQQLSAEI 181
>Z99281-8|CAB16514.1| 185|Caenorhabditis elegans Hypothetical
protein Y57G11C.13 protein.
Length = 185
Score = 46.4 bits (105), Expect = 2e-05
Identities = 21/83 (25%), Positives = 44/83 (53%)
Frame = -3
Query: 770 DRXRIGEAREELMRMLSEDEXRDAVLLIFANKQDLPNAMNAAEITDKLGLHSLRNRNWYI 591
D ++ +R ELM++L + + +L+ NK+DLP A++ ++ +++ L S++NR
Sbjct: 100 DEEKLEASRNELMQLLDKPQLDAIPVLVLGNKKDLPGALDERQLIERMNLSSIQNREICC 159
Query: 590 QATCATSGDGLYEGLDWLSNQLK 522
+ + + L WL + K
Sbjct: 160 YSISCKEKENIDITLQWLIDHSK 182
>AB185209-1|BAD30093.1| 185|Caenorhabditis elegans novel small G
protein indispensablefor equal chromosome segregation
protein.
Length = 185
Score = 46.4 bits (105), Expect = 2e-05
Identities = 21/83 (25%), Positives = 44/83 (53%)
Frame = -3
Query: 770 DRXRIGEAREELMRMLSEDEXRDAVLLIFANKQDLPNAMNAAEITDKLGLHSLRNRNWYI 591
D ++ +R ELM++L + + +L+ NK+DLP A++ ++ +++ L S++NR
Sbjct: 100 DEEKLEASRNELMQLLDKPQLDAIPVLVLGNKKDLPGALDERQLIERMNLSSIQNREICC 159
Query: 590 QATCATSGDGLYEGLDWLSNQLK 522
+ + + L WL + K
Sbjct: 160 YSISCKEKENIDITLQWLIDHSK 182
>U80847-2|AAB37982.2| 475|Caenorhabditis elegans Hypothetical
protein C17H11.1 protein.
Length = 475
Score = 29.9 bits (64), Expect = 2.1
Identities = 13/42 (30%), Positives = 20/42 (47%)
Frame = -3
Query: 338 MQYGTLCALKYCFSKYYINYVYLNAINGMQINSVQCLYLVAL 213
+ Y + K F YY Y+ ING I+ + C +L+ L
Sbjct: 104 IHYCLVSTTKMAFVMYYTTYIEAPFINGFLISGLYCSFLLTL 145
>AF068716-1|AAC17747.1| 247|Caenorhabditis elegans Hypothetical
protein F26D11.4 protein.
Length = 247
Score = 29.5 bits (63), Expect = 2.8
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = -3
Query: 662 NAMNAAEITDKLGLHSLRNRNWYIQATCATSGDGLYEGLDWLSN 531
N A EI D HS WY ++T T D ++ + +LSN
Sbjct: 143 NGTTAFEIADGSSNHSYLQSAWYTESTRRTDQDIVFNCMMYLSN 186
>Z81563-3|CAB04565.1| 222|Caenorhabditis elegans Hypothetical
protein K04H8.3 protein.
Length = 222
Score = 29.1 bits (62), Expect = 3.7
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 4/49 (8%)
Frame = -1
Query: 475 IIERDYGLRYVNFIC---Y*IQCIMCGIINVLLT-RHLVTEGAPHSFRT 341
I E+ LRY NFIC + + C + + + +T R++ G P +F T
Sbjct: 105 ITEQQLNLRYYNFICSSHFHLDCKLTETLQICMTDRYVAVLGLPLAFDT 153
>Z66496-6|CAA91281.3| 191|Caenorhabditis elegans Hypothetical
protein E04D5.4 protein.
Length = 191
Score = 29.1 bits (62), Expect = 3.7
Identities = 15/45 (33%), Positives = 21/45 (46%)
Frame = -1
Query: 622 CIRCATVTGTSKRHAPLPETDCTRVSTGSPISSRTPTANRMCANS 488
C CA T T+ A P TDCT+ + + TP + CA +
Sbjct: 91 CGFCAEETTTASTCADDPNTDCTQYTFLCSNAKYTPLLQQFCAKT 135
>Z48585-12|CAI46589.1| 191|Caenorhabditis elegans Hypothetical
protein E04D5.4 protein.
Length = 191
Score = 29.1 bits (62), Expect = 3.7
Identities = 15/45 (33%), Positives = 21/45 (46%)
Frame = -1
Query: 622 CIRCATVTGTSKRHAPLPETDCTRVSTGSPISSRTPTANRMCANS 488
C CA T T+ A P TDCT+ + + TP + CA +
Sbjct: 91 CGFCAEETTTASTCADDPNTDCTQYTFLCSNAKYTPLLQQFCAKT 135
>Z50029-8|CAA90342.2| 668|Caenorhabditis elegans Hypothetical
protein ZC504.3 protein.
Length = 668
Score = 28.3 bits (60), Expect = 6.4
Identities = 17/51 (33%), Positives = 22/51 (43%)
Frame = -2
Query: 771 RSGTYRRGTRRAHEDAQRR*XTGCSTFDLCE*TGSAKRNERSRDNRQTGSA 619
R YR+ R H D RR G T+ C +RN S NR+ S+
Sbjct: 59 RDDRYRKVDSRDHRDRNRRSPAGSRTY--CRDEPDRRRNNHSDRNRRDRSS 107
>U80023-10|AAG24042.1| 97|Caenorhabditis elegans Hypothetical
protein F07C4.11 protein.
Length = 97
Score = 28.3 bits (60), Expect = 6.4
Identities = 15/58 (25%), Positives = 21/58 (36%)
Frame = -1
Query: 622 CIRCATVTGTSKRHAPLPETDCTRVSTGSPISSRTPTANRMCANSQTNLIIERDYGLR 449
C RC + T S A + + CT + S S N C N L + + R
Sbjct: 35 CARCPSTTAASALAAAVAASSCTTYAADSSPSCAAWAKNGFCTNMSYTLAQRKSFCAR 92
>Z82268-12|CAL64003.1| 1210|Caenorhabditis elegans Hypothetical
protein Y37A1C.1c protein.
Length = 1210
Score = 27.9 bits (59), Expect = 8.5
Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +1
Query: 79 LFLPPLSDKIKKKNKIVGNSP-TLHTIFCSTSSRIEHAPHD 198
L +PP+ +K K+K K NSP T+H I ++R + + D
Sbjct: 900 LNVPPIEEKEKEKEKTNENSPETVHLIEKDETARTDKSGDD 940
>Z82268-10|CAB05202.1| 972|Caenorhabditis elegans Hypothetical
protein Y37A1C.1a protein.
Length = 972
Score = 27.9 bits (59), Expect = 8.5
Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +1
Query: 79 LFLPPLSDKIKKKNKIVGNSP-TLHTIFCSTSSRIEHAPHD 198
L +PP+ +K K+K K NSP T+H I ++R + + D
Sbjct: 900 LNVPPIEEKEKEKEKTNENSPETVHLIEKDETARTDKSGDD 940
>AL021476-3|CAL63996.1| 1210|Caenorhabditis elegans Hypothetical
protein Y37A1C.1c protein.
Length = 1210
Score = 27.9 bits (59), Expect = 8.5
Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +1
Query: 79 LFLPPLSDKIKKKNKIVGNSP-TLHTIFCSTSSRIEHAPHD 198
L +PP+ +K K+K K NSP T+H I ++R + + D
Sbjct: 900 LNVPPIEEKEKEKEKTNENSPETVHLIEKDETARTDKSGDD 940
>AL021476-1|CAA16317.1| 972|Caenorhabditis elegans Hypothetical
protein Y37A1C.1a protein.
Length = 972
Score = 27.9 bits (59), Expect = 8.5
Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +1
Query: 79 LFLPPLSDKIKKKNKIVGNSP-TLHTIFCSTSSRIEHAPHD 198
L +PP+ +K K+K K NSP T+H I ++R + + D
Sbjct: 900 LNVPPIEEKEKEKEKTNENSPETVHLIEKDETARTDKSGDD 940
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,537,464
Number of Sequences: 27780
Number of extensions: 372071
Number of successful extensions: 1015
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 978
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1014
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1851132448
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -