Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P28_pT_B10
(840 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_O46082 Cluster: EG:63B12.2 protein; n=6; Endopterygota|... 178 1e-43
UniRef50_UPI00003C069B Cluster: PREDICTED: similar to mitochondr... 168 1e-40
UniRef50_Q9NX20 Cluster: 39S ribosomal protein L16, mitochondria... 127 3e-28
UniRef50_Q5C205 Cluster: SJCHGC03477 protein; n=1; Schistosoma j... 91 3e-17
UniRef50_Q22140 Cluster: Putative uncharacterized protein; n=2; ... 89 1e-16
UniRef50_A7HZL3 Cluster: Ribosomal protein L16; n=1; Campylobact... 48 2e-04
UniRef50_A7SFH6 Cluster: Predicted protein; n=1; Nematostella ve... 45 0.003
UniRef50_Q9RXJ5 Cluster: 50S ribosomal protein L16; n=19; Bacter... 44 0.004
UniRef50_Q5L416 Cluster: 50S ribosomal protein L16; n=16; Bacter... 42 0.015
UniRef50_Q0QIQ5 Cluster: Ribosomal protein L16; n=1; Oltmannsiel... 39 0.14
UniRef50_Q748Z5 Cluster: 50S ribosomal protein L16; n=538; cellu... 38 0.41
UniRef50_Q6UVU0 Cluster: Ribosomal protein L16; n=1; Pseudendocl... 37 0.55
UniRef50_Q67JV0 Cluster: 50S ribosomal protein L16; n=82; cellul... 37 0.72
UniRef50_Q4P2Y8 Cluster: Putative uncharacterized protein; n=1; ... 36 0.96
UniRef50_Q87VF1 Cluster: Membrane protein, putative; n=3; Pseudo... 35 2.9
UniRef50_Q7V9W9 Cluster: 50S ribosomal protein L16; n=403; cellu... 33 6.8
>UniRef50_O46082 Cluster: EG:63B12.2 protein; n=6;
Endopterygota|Rep: EG:63B12.2 protein - Drosophila
melanogaster (Fruit fly)
Length = 254
Score = 178 bits (434), Expect = 1e-43
Identities = 78/162 (48%), Positives = 107/162 (66%)
Frame = -1
Query: 840 TLQLKXYGVRATGGGRMKHEHFEMARLVVARKLDMKRMFAIWRIDPPWQPITXXXXXXXX 661
TL K Y + ATGGGR++ H+EM RL + RK+++ MFA WR+ PWQPIT
Sbjct: 93 TLLHKQYAIVATGGGRLRWGHYEMMRLTIGRKMNVNTMFATWRVPAPWQPITKKGQGQRM 152
Query: 660 XXXXGAIDHYVTPIKSGRIILEVGGKCEYAEVHDMLRIISERLPFKAEPVSEEILEQXXX 481
GAIDHYVTPIK+GR+I+E+ GKCE+ EV L+ ++ +LPF+A VS+E+L++
Sbjct: 153 GGGKGAIDHYVTPIKAGRVIVEIAGKCEFVEVKQFLQQVANQLPFQATVVSQEMLDEQRV 212
Query: 480 XXXXXXXXXXXEYTMKYIIQNNMGGCHKMLSPFDHKWYTKYL 355
+TMKY+IQNN+ GCH+ LSP DHKW+ K+L
Sbjct: 213 AEEEQTRQNENPFTMKYVIQNNLSGCHRWLSPVDHKWFGKHL 254
>UniRef50_UPI00003C069B Cluster: PREDICTED: similar to mitochondrial
ribosomal protein L16 CG3109-PA; n=1; Apis
mellifera|Rep: PREDICTED: similar to mitochondrial
ribosomal protein L16 CG3109-PA - Apis mellifera
Length = 240
Score = 168 bits (409), Expect = 1e-40
Identities = 76/162 (46%), Positives = 106/162 (65%)
Frame = -1
Query: 840 TLQLKXYGVRATGGGRMKHEHFEMARLVVARKLDMKRMFAIWRIDPPWQPITXXXXXXXX 661
TL K YG+ ATGGGRMK HFEM R+ + R +D ++FA+WR+ PWQPIT
Sbjct: 79 TLLHKQYGIIATGGGRMKFSHFEMIRMTILRNIDYNKVFALWRVPSPWQPITMKSHGLRM 138
Query: 660 XXXXGAIDHYVTPIKSGRIILEVGGKCEYAEVHDMLRIISERLPFKAEPVSEEILEQXXX 481
G+I+HYVTP+K+ ++ILEVGG EY EV ++L+ I++RLPF A VS+EI+++
Sbjct: 139 GSGKGSINHYVTPVKAKQVILEVGGNIEYFEVKNILKNIAKRLPFDAMAVSQEIMDKMEA 198
Query: 480 XXXXXXXXXXXEYTMKYIIQNNMGGCHKMLSPFDHKWYTKYL 355
+T KYIIQNNM GC+K +S +D KW+ +Y+
Sbjct: 199 EKKKVEEENQNPWTWKYIIQNNMLGCNKWISKYDRKWFNEYI 240
>UniRef50_Q9NX20 Cluster: 39S ribosomal protein L16, mitochondrial
precursor; n=27; Deuterostomia|Rep: 39S ribosomal
protein L16, mitochondrial precursor - Homo sapiens
(Human)
Length = 251
Score = 127 bits (307), Expect = 3e-28
Identities = 63/155 (40%), Positives = 88/155 (56%)
Frame = -1
Query: 822 YGVRATGGGRMKHEHFEMARLVVARKLDMKRMFAIWRIDPPWQPITXXXXXXXXXXXXGA 643
+ + A GGG + HFEM RL + R +D K MFAIWR+ P++PIT GA
Sbjct: 87 FAILALGGGYLHWGHFEMMRLTINRSMDPKNMFAIWRVPAPFKPITRKSVGHRMGGGKGA 146
Query: 642 IDHYVTPIKSGRIILEVGGKCEYAEVHDMLRIISERLPFKAEPVSEEILEQXXXXXXXXX 463
IDHYVTP+K+GR+++E+GG+CE+ EV L ++ +LPF A+ VS LE+
Sbjct: 147 IDHYVTPVKAGRLVVEMGGRCEFEEVQGFLDQVAHKLPFAAKAVSRGTLEKMRKDQEERE 206
Query: 462 XXXXXEYTMKYIIQNNMGGCHKMLSPFDHKWYTKY 358
+T + I NM G K+LSP+D KY
Sbjct: 207 RNNQNPWTFERIATANMLGIRKVLSPYDLTHKGKY 241
>UniRef50_Q5C205 Cluster: SJCHGC03477 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC03477 protein - Schistosoma
japonicum (Blood fluke)
Length = 198
Score = 91.1 bits (216), Expect = 3e-17
Identities = 38/90 (42%), Positives = 56/90 (62%)
Frame = -1
Query: 822 YGVRATGGGRMKHEHFEMARLVVARKLDMKRMFAIWRIDPPWQPITXXXXXXXXXXXXGA 643
YG++AT GG ++ HFEM R+ + + LD KRMFA+W +D PW+P+T
Sbjct: 105 YGIQATEGGELEFGHFEMMRVAINKHLDEKRMFALWCVDAPWKPVTRRAQGKRKGGGKAN 164
Query: 642 IDHYVTPIKSGRIILEVGGKCEYAEVHDML 553
I HY TP+K+ RII+E+GG + E + +L
Sbjct: 165 IHHYTTPVKAERIIVELGGYLNWREAYRIL 194
>UniRef50_Q22140 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 219
Score = 89.4 bits (212), Expect = 1e-16
Identities = 49/155 (31%), Positives = 72/155 (46%)
Frame = -1
Query: 822 YGVRATGGGRMKHEHFEMARLVVARKLDMKRMFAIWRIDPPWQPITXXXXXXXXXXXXGA 643
YG+ A GG + + F+ + + + L + F++WR+D PW P T G+
Sbjct: 65 YGLAAVSGGFIDSDDFKFIQDRINKNL-IDNQFSVWRVDAPWLPRTKKAQGTRLGGGKGS 123
Query: 642 IDHYVTPIKSGRIILEVGGKCEYAEVHDMLRIISERLPFKAEPVSEEILEQXXXXXXXXX 463
I YVTP+++ RIILEVGG E L + ER F E VSE +L +
Sbjct: 124 IQKYVTPVRANRIILEVGGHITEIEAKAFLLYLCERFSFPVEFVSETMLAERRKKAEEER 183
Query: 462 XXXXXEYTMKYIIQNNMGGCHKMLSPFDHKWYTKY 358
+ +I+ NM C+ LS +D W KY
Sbjct: 184 AMNKNGFNWGKVIKYNMQNCNSWLSSYDVAWKGKY 218
>UniRef50_A7HZL3 Cluster: Ribosomal protein L16; n=1; Campylobacter
hominis ATCC BAA-381|Rep: Ribosomal protein L16 -
Campylobacter hominis (strain ATCC BAA-381 / LMG 19568 /
NCTC 13146 /CH001A)
Length = 141
Score = 48.4 bits (110), Expect = 2e-04
Identities = 32/112 (28%), Positives = 50/112 (44%)
Frame = -1
Query: 837 LQLKXYGVRATGGGRMKHEHFEMARLVVARKLDMKRMFAIWRIDPPWQPITXXXXXXXXX 658
L YG++A GR+ E AR+ + R ++ R +W P +P+T
Sbjct: 27 LNFGDYGIKAVEAGRINSNQIEAARIAMTRYVN--REAKVWINVFPDKPLTKKPLQTRMG 84
Query: 657 XXXGAIDHYVTPIKSGRIILEVGGKCEYAEVHDMLRIISERLPFKAEPVSEE 502
++ +V IK GRII E+ G E L + +LPFK + V+ E
Sbjct: 85 KGKTGVEEWVMNIKPGRIIFELTGVNEDV-ARRALELSMHKLPFKTKIVTRE 135
>UniRef50_A7SFH6 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 99
Score = 44.8 bits (101), Expect = 0.003
Identities = 33/100 (33%), Positives = 44/100 (44%)
Frame = -1
Query: 822 YGVRATGGGRMKHEHFEMARLVVARKLDMKRMFAIWRIDPPWQPITXXXXXXXXXXXXGA 643
YGV A G +K E ARL + RK K++ I P+T G
Sbjct: 2 YGVYAAQPGLVKASALESARLAIIRKTKNKQIIMI----KAHVPMTKKALGSRMGKGKGK 57
Query: 642 IDHYVTPIKSGRIILEVGGKCEYAEVHDMLRIISERLPFK 523
+DHYV +K+G+I+ E E A + R S RLP K
Sbjct: 58 MDHYVANVKAGKILFEYSSDSE-ALALEAFRQASNRLPVK 96
>UniRef50_Q9RXJ5 Cluster: 50S ribosomal protein L16; n=19;
Bacteria|Rep: 50S ribosomal protein L16 - Deinococcus
radiodurans
Length = 141
Score = 44.4 bits (100), Expect = 0.004
Identities = 29/111 (26%), Positives = 53/111 (47%)
Frame = -1
Query: 822 YGVRATGGGRMKHEHFEMARLVVARKLDMKRMFAIWRIDPPWQPITXXXXXXXXXXXXGA 643
YG+ A +K E R+V++R I RI P +P+T GA
Sbjct: 32 YGLIAMEPAWIKSNQIEACRIVMSRHFRRGGKIYI-RIFPD-KPVTKKPAETRMGKGKGA 89
Query: 642 IDHYVTPIKSGRIILEVGGKCEYAEVHDMLRIISERLPFKAEPVSEEILEQ 490
++++V+ +K GR++ EV G E + + R+ +LP + + V E+ ++
Sbjct: 90 VEYWVSVVKPGRVMFEVAGVTE-EQAKEAFRLAGHKLPIQTKMVKREVYDE 139
>UniRef50_Q5L416 Cluster: 50S ribosomal protein L16; n=16;
Bacteria|Rep: 50S ribosomal protein L16 - Geobacillus
kaustophilus
Length = 141
Score = 42.3 bits (95), Expect = 0.015
Identities = 30/107 (28%), Positives = 49/107 (45%)
Frame = -1
Query: 822 YGVRATGGGRMKHEHFEMARLVVARKLDMKRMFAIWRIDPPWQPITXXXXXXXXXXXXGA 643
+G++A + + E AR + R M+R +W P +P T GA
Sbjct: 32 FGLQALESAWITNRQIEAARRAMTRY--MRRGGKVWIRIFPSKPYTAKPLEVRMGSGKGA 89
Query: 642 IDHYVTPIKSGRIILEVGGKCEYAEVHDMLRIISERLPFKAEPVSEE 502
+ +V +K G+++ EVGG E + LR+ S +LP K + V E
Sbjct: 90 PEGWVAVVKPGKVMFEVGGVSEEV-AREALRLASHKLPIKCKFVKRE 135
>UniRef50_Q0QIQ5 Cluster: Ribosomal protein L16; n=1;
Oltmannsiellopsis viridis|Rep: Ribosomal protein L16 -
Oltmannsiellopsis viridis (Marine flagellate)
Length = 133
Score = 39.1 bits (87), Expect = 0.14
Identities = 23/84 (27%), Positives = 36/84 (42%)
Frame = -1
Query: 837 LQLKXYGVRATGGGRMKHEHFEMARLVVARKLDMKRMFAIWRIDPPWQPITXXXXXXXXX 658
L YG++A GG + + E +R + R KR +W P P+T
Sbjct: 27 LSFGQYGLKALEGGAITEKTIETSRRTITRTF--KRRGKVWIRIVPDLPVTAKPSEARLG 84
Query: 657 XXXGAIDHYVTPIKSGRIILEVGG 586
G+I H+ + +K G I+ E G
Sbjct: 85 KGVGSISHWTSVVKKGEILFEFSG 108
>UniRef50_Q748Z5 Cluster: 50S ribosomal protein L16; n=538; cellular
organisms|Rep: 50S ribosomal protein L16 - Geobacter
sulfurreducens
Length = 140
Score = 37.5 bits (83), Expect = 0.41
Identities = 28/113 (24%), Positives = 52/113 (46%)
Frame = -1
Query: 840 TLQLKXYGVRATGGGRMKHEHFEMARLVVARKLDMKRMFAIWRIDPPWQPITXXXXXXXX 661
+L +G++AT G + E AR+ + R + KR IW P +P+T
Sbjct: 26 SLAFGEFGLQATECGWVDSRQIEAARIAMTRYI--KRGGKIWIRLFPDKPLTSKPAETRM 83
Query: 660 XXXXGAIDHYVTPIKSGRIILEVGGKCEYAEVHDMLRIISERLPFKAEPVSEE 502
G+ D +V +K G+++ E+ G E + R+ + +LP + +S +
Sbjct: 84 GKGKGSPDSWVCVVKPGKVLYEMEGVTEEI-AREAFRLAAHKLPVGTKFISRK 135
>UniRef50_Q6UVU0 Cluster: Ribosomal protein L16; n=1;
Pseudendoclonium akinetum|Rep: Ribosomal protein L16 -
Pseudendoclonium akinetum (Green alga)
Length = 302
Score = 37.1 bits (82), Expect = 0.55
Identities = 24/84 (28%), Positives = 35/84 (41%)
Frame = -1
Query: 837 LQLKXYGVRATGGGRMKHEHFEMARLVVARKLDMKRMFAIWRIDPPWQPITXXXXXXXXX 658
+Q G G + + E RL+VARKL K+ W P P+T
Sbjct: 196 VQFGACGFYFCSSGTITAKFIETIRLIVARKL--KKTGRFWIRVCPDTPVTARSAETRMG 253
Query: 657 XXXGAIDHYVTPIKSGRIILEVGG 586
GAI HY ++ G++ +E G
Sbjct: 254 RGKGAISHYEAKVRPGQMFMEFSG 277
>UniRef50_Q67JV0 Cluster: 50S ribosomal protein L16; n=82; cellular
organisms|Rep: 50S ribosomal protein L16 -
Symbiobacterium thermophilum
Length = 155
Score = 36.7 bits (81), Expect = 0.72
Identities = 28/107 (26%), Positives = 48/107 (44%)
Frame = -1
Query: 822 YGVRATGGGRMKHEHFEMARLVVARKLDMKRMFAIWRIDPPWQPITXXXXXXXXXXXXGA 643
YG++A + E AR+ + R + KR +W P + +T GA
Sbjct: 35 YGLQALEPAFITDRQIEAARVAMTRFI--KRGGKVWIKIFPHKALTRKPAEVRMGSGKGA 92
Query: 642 IDHYVTPIKSGRIILEVGGKCEYAEVHDMLRIISERLPFKAEPVSEE 502
+ +V +K GRI+ E+ G E + +R+ + +LP K + V E
Sbjct: 93 PEVWVAVVKPGRILFELAGVDE-ETAQEAMRLAAHKLPIKCKFVKRE 138
>UniRef50_Q4P2Y8 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 238
Score = 36.3 bits (80), Expect = 0.96
Identities = 28/113 (24%), Positives = 48/113 (42%), Gaps = 2/113 (1%)
Frame = -1
Query: 840 TLQLKXYGVRATGGGRMKHEHFEMARLVVARKLDMKRMFAIWRIDPPWQPITXXXXXXXX 661
T+Q YG+R R+ + A + RKL + + ++ P P+
Sbjct: 99 TVQEGAYGIRLLAPARLSAKQLVAAETALKRKLKVVKGAQVFLRVFPDIPVCIKGNETRM 158
Query: 660 XXXXGAIDHYVTPIKSGRIILEVGGKCEY-AEV-HDMLRIISERLPFKAEPVS 508
G +++ G++I E+GG E EV + LR+ S +LP E V+
Sbjct: 159 GKGKGTFEYWACRANMGKVIFEIGGPVEIRPEVAKEALRLASAKLPVPTEFVT 211
>UniRef50_Q87VF1 Cluster: Membrane protein, putative; n=3;
Pseudomonas syringae group|Rep: Membrane protein,
putative - Pseudomonas syringae pv. tomato
Length = 391
Score = 34.7 bits (76), Expect = 2.9
Identities = 15/32 (46%), Positives = 22/32 (68%)
Frame = +1
Query: 532 QSFRYYSQHVVYLSIFTFATNFKNDSTRFNRG 627
Q F+YY +H+VY+S+F FA + D+ F RG
Sbjct: 85 QEFQYY-KHIVYVSLFVFAVSGLTDNGVFRRG 115
>UniRef50_Q7V9W9 Cluster: 50S ribosomal protein L16; n=403; cellular
organisms|Rep: 50S ribosomal protein L16 -
Prochlorococcus marinus
Length = 182
Score = 33.5 bits (73), Expect = 6.8
Identities = 26/103 (25%), Positives = 47/103 (45%), Gaps = 1/103 (0%)
Frame = -1
Query: 822 YGVRATGGGRMKHEHFEMARLVVARKLDMKRMFAIWRIDPPWQPITXXXXXXXXXXXXGA 643
+ ++A G + E +R + R + KR IW P +P+T G
Sbjct: 32 FALQAQECGWITSRQIEASRRAMTRYV--KRGGQIWIRIFPDKPVTMRPAETRMGSGKGN 89
Query: 642 IDHYVTPIKSGRIILEVGGKCEYAEV-HDMLRIISERLPFKAE 517
+ +V +K GRI+ E+GG+ E+ + +R+ +LP K +
Sbjct: 90 PEFWVAVVKPGRILFEMGGEEITEEIAKEAMRLAQYKLPIKTK 132
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 768,843,056
Number of Sequences: 1657284
Number of extensions: 13901783
Number of successful extensions: 27370
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 26540
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27360
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 73373641369
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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