Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_pT_B10
         (840 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR457117-1|CAG33398.1|  251|Homo sapiens MRPL16 protein.              127   4e-29
BC019269-1|AAH19269.1|  251|Homo sapiens mitochondrial ribosomal...   127   4e-29
BC001040-1|AAH01040.1|  251|Homo sapiens mitochondrial ribosomal...   127   4e-29
AK000491-1|BAA91202.1|  251|Homo sapiens protein ( Homo sapiens ...   127   4e-29
AF183428-1|AAG09697.1|  251|Homo sapiens 28.4 kDa protein protein.    127   4e-29
AB049642-1|BAB40847.1|  251|Homo sapiens mitochondrial ribosomal...   127   4e-29

>CR457117-1|CAG33398.1|  251|Homo sapiens MRPL16 protein.
          Length = 251

 Score =  127 bits (307), Expect = 4e-29
 Identities = 63/155 (40%), Positives = 88/155 (56%)
 Frame = -1

Query: 822 YGVRATGGGRMKHEHFEMARLVVARKLDMKRMFAIWRIDPPWQPITXXXXXXXXXXXXGA 643
           + + A GGG +   HFEM RL + R +D K MFAIWR+  P++PIT            GA
Sbjct: 87  FAILALGGGYLHWGHFEMMRLTINRSMDPKNMFAIWRVPAPFKPITRKSVGHRMGGGKGA 146

Query: 642 IDHYVTPIKSGRIILEVGGKCEYAEVHDMLRIISERLPFKAEPVSEEILEQXXXXXXXXX 463
           IDHYVTP+K+GR+++E+GG+CE+ EV   L  ++ +LPF A+ VS   LE+         
Sbjct: 147 IDHYVTPVKAGRLVVEMGGRCEFEEVQGFLDQVAHKLPFAAKAVSRGTLEKMRKDQEERE 206

Query: 462 XXXXXEYTMKYIIQNNMGGCHKMLSPFDHKWYTKY 358
                 +T + I   NM G  K+LSP+D     KY
Sbjct: 207 RNNQNPWTFERIATANMLGIRKVLSPYDLTHKGKY 241


>BC019269-1|AAH19269.1|  251|Homo sapiens mitochondrial ribosomal
           protein L16 protein.
          Length = 251

 Score =  127 bits (307), Expect = 4e-29
 Identities = 63/155 (40%), Positives = 88/155 (56%)
 Frame = -1

Query: 822 YGVRATGGGRMKHEHFEMARLVVARKLDMKRMFAIWRIDPPWQPITXXXXXXXXXXXXGA 643
           + + A GGG +   HFEM RL + R +D K MFAIWR+  P++PIT            GA
Sbjct: 87  FAILALGGGYLHWGHFEMMRLTINRSMDPKNMFAIWRVPAPFKPITRKSVGHRMGGGKGA 146

Query: 642 IDHYVTPIKSGRIILEVGGKCEYAEVHDMLRIISERLPFKAEPVSEEILEQXXXXXXXXX 463
           IDHYVTP+K+GR+++E+GG+CE+ EV   L  ++ +LPF A+ VS   LE+         
Sbjct: 147 IDHYVTPVKAGRLVVEMGGRCEFEEVQGFLDQVAHKLPFAAKAVSRGTLEKMRKDQEERE 206

Query: 462 XXXXXEYTMKYIIQNNMGGCHKMLSPFDHKWYTKY 358
                 +T + I   NM G  K+LSP+D     KY
Sbjct: 207 RNNQNPWTFERIATANMLGIRKVLSPYDLTHKGKY 241


>BC001040-1|AAH01040.1|  251|Homo sapiens mitochondrial ribosomal
           protein L16 protein.
          Length = 251

 Score =  127 bits (307), Expect = 4e-29
 Identities = 63/155 (40%), Positives = 88/155 (56%)
 Frame = -1

Query: 822 YGVRATGGGRMKHEHFEMARLVVARKLDMKRMFAIWRIDPPWQPITXXXXXXXXXXXXGA 643
           + + A GGG +   HFEM RL + R +D K MFAIWR+  P++PIT            GA
Sbjct: 87  FAILALGGGYLHWGHFEMMRLTINRSMDPKNMFAIWRVPAPFKPITRKSVGHRMGGGKGA 146

Query: 642 IDHYVTPIKSGRIILEVGGKCEYAEVHDMLRIISERLPFKAEPVSEEILEQXXXXXXXXX 463
           IDHYVTP+K+GR+++E+GG+CE+ EV   L  ++ +LPF A+ VS   LE+         
Sbjct: 147 IDHYVTPVKAGRLVVEMGGRCEFEEVQGFLDQVAHKLPFAAKAVSRGTLEKMRKDQEERE 206

Query: 462 XXXXXEYTMKYIIQNNMGGCHKMLSPFDHKWYTKY 358
                 +T + I   NM G  K+LSP+D     KY
Sbjct: 207 RNNQNPWTFERIATANMLGIRKVLSPYDLTHKGKY 241


>AK000491-1|BAA91202.1|  251|Homo sapiens protein ( Homo sapiens
           cDNA FLJ20484 fis, clone KAT07770. ).
          Length = 251

 Score =  127 bits (307), Expect = 4e-29
 Identities = 63/155 (40%), Positives = 88/155 (56%)
 Frame = -1

Query: 822 YGVRATGGGRMKHEHFEMARLVVARKLDMKRMFAIWRIDPPWQPITXXXXXXXXXXXXGA 643
           + + A GGG +   HFEM RL + R +D K MFAIWR+  P++PIT            GA
Sbjct: 87  FAILALGGGYLHWGHFEMMRLTINRSMDPKNMFAIWRVPAPFKPITRKSVGHRMGGGKGA 146

Query: 642 IDHYVTPIKSGRIILEVGGKCEYAEVHDMLRIISERLPFKAEPVSEEILEQXXXXXXXXX 463
           IDHYVTP+K+GR+++E+GG+CE+ EV   L  ++ +LPF A+ VS   LE+         
Sbjct: 147 IDHYVTPVKAGRLVVEMGGRCEFEEVQGFLDQVAHKLPFAAKAVSRGTLEKMRKDQEERE 206

Query: 462 XXXXXEYTMKYIIQNNMGGCHKMLSPFDHKWYTKY 358
                 +T + I   NM G  K+LSP+D     KY
Sbjct: 207 RNNQNPWTFERIATANMLGIRKVLSPYDLTHKGKY 241


>AF183428-1|AAG09697.1|  251|Homo sapiens 28.4 kDa protein protein.
          Length = 251

 Score =  127 bits (307), Expect = 4e-29
 Identities = 63/155 (40%), Positives = 88/155 (56%)
 Frame = -1

Query: 822 YGVRATGGGRMKHEHFEMARLVVARKLDMKRMFAIWRIDPPWQPITXXXXXXXXXXXXGA 643
           + + A GGG +   HFEM RL + R +D K MFAIWR+  P++PIT            GA
Sbjct: 87  FAILALGGGYLHWGHFEMMRLTINRSMDPKNMFAIWRVPAPFKPITRKSVGHRMGGGKGA 146

Query: 642 IDHYVTPIKSGRIILEVGGKCEYAEVHDMLRIISERLPFKAEPVSEEILEQXXXXXXXXX 463
           IDHYVTP+K+GR+++E+GG+CE+ EV   L  ++ +LPF A+ VS   LE+         
Sbjct: 147 IDHYVTPVKAGRLVVEMGGRCEFEEVQGFLDQVAHKLPFAAKAVSRGTLEKMRKDQEERE 206

Query: 462 XXXXXEYTMKYIIQNNMGGCHKMLSPFDHKWYTKY 358
                 +T + I   NM G  K+LSP+D     KY
Sbjct: 207 RNNQNPWTFERIATANMLGIRKVLSPYDLTHKGKY 241


>AB049642-1|BAB40847.1|  251|Homo sapiens mitochondrial ribosomal
           protein L16 (L16mt) protein.
          Length = 251

 Score =  127 bits (307), Expect = 4e-29
 Identities = 63/155 (40%), Positives = 88/155 (56%)
 Frame = -1

Query: 822 YGVRATGGGRMKHEHFEMARLVVARKLDMKRMFAIWRIDPPWQPITXXXXXXXXXXXXGA 643
           + + A GGG +   HFEM RL + R +D K MFAIWR+  P++PIT            GA
Sbjct: 87  FAILALGGGYLHWGHFEMMRLTINRSMDPKNMFAIWRVPAPFKPITRKSVGHRMGGGKGA 146

Query: 642 IDHYVTPIKSGRIILEVGGKCEYAEVHDMLRIISERLPFKAEPVSEEILEQXXXXXXXXX 463
           IDHYVTP+K+GR+++E+GG+CE+ EV   L  ++ +LPF A+ VS   LE+         
Sbjct: 147 IDHYVTPVKAGRLVVEMGGRCEFEEVQGFLDQVAHKLPFAAKAVSRGTLEKMRKDQEERE 206

Query: 462 XXXXXEYTMKYIIQNNMGGCHKMLSPFDHKWYTKY 358
                 +T + I   NM G  K+LSP+D     KY
Sbjct: 207 RNNQNPWTFERIATANMLGIRKVLSPYDLTHKGKY 241


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,154,098
Number of Sequences: 237096
Number of extensions: 2188424
Number of successful extensions: 3278
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3057
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3276
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10593928420
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)