Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_pT_B10
         (840 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z35663-9|CAA84730.1|  219|Caenorhabditis elegans Hypothetical pr...    88   8e-18
Z79759-3|CAB02136.1|  225|Caenorhabditis elegans Hypothetical pr...    28   9.5  

>Z35663-9|CAA84730.1|  219|Caenorhabditis elegans Hypothetical
           protein T04A8.11 protein.
          Length = 219

 Score = 87.8 bits (208), Expect = 8e-18
 Identities = 49/155 (31%), Positives = 72/155 (46%)
 Frame = -1

Query: 822 YGVRATGGGRMKHEHFEMARLVVARKLDMKRMFAIWRIDPPWQPITXXXXXXXXXXXXGA 643
           YG+ A  GG +  + F+  +  + + L +   F++WR+D PW P T            G+
Sbjct: 65  YGLAAVSGGFIDSDDFKFIQDRINKNL-IDNQFSVWRVDAPWLPRTKKAQGTRLGGGKGS 123

Query: 642 IDHYVTPIKSGRIILEVGGKCEYAEVHDMLRIISERLPFKAEPVSEEILEQXXXXXXXXX 463
           I  YVTP+++ RIILEVGG     E    L  + ER  F  E VSE +L +         
Sbjct: 124 IQKYVTPVRANRIILEVGGHITEIEAKAFLLYLCERFSFPVEFVSETMLAERRKKAEEER 183

Query: 462 XXXXXEYTMKYIIQNNMGGCHKMLSPFDHKWYTKY 358
                 +    +I+ NM  C+  LS +D  W  KY
Sbjct: 184 AMNKNGFNWGKVIKYNMQNCNSWLSSYDVAWKGKY 218


>Z79759-3|CAB02136.1|  225|Caenorhabditis elegans Hypothetical
           protein ZK858.3 protein.
          Length = 225

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 11/41 (26%), Positives = 24/41 (58%)
 Frame = +3

Query: 678 LSWLWVAMEDLFSRWQTYASCLISWQQLSEPFQNVRVSFFH 800
           ++WL    + + + W +YA+C  S+Q  +E  ++   +FF+
Sbjct: 165 INWLIKPFKPVVNGWSSYANCAASFQSPTE-VESASYTFFY 204


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,127,765
Number of Sequences: 27780
Number of extensions: 348561
Number of successful extensions: 676
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 669
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 676
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2077023564
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)