Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_pT_B08
         (718 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4Z5J9 Cluster: Putative uncharacterized protein; n=3; ...    35   2.3  
UniRef50_A4VG49 Cluster: Putative uncharacterized protein; n=1; ...    33   5.3  
UniRef50_Q7NC07 Cluster: Putative uncharacterized protein; n=1; ...    33   7.0  
UniRef50_Q23Q77 Cluster: Putative uncharacterized protein; n=1; ...    33   7.0  
UniRef50_Q5CRF2 Cluster: Putative uncharacterized protein; n=2; ...    33   9.3  
UniRef50_A5K0J2 Cluster: Putative uncharacterized protein; n=1; ...    33   9.3  

>UniRef50_Q4Z5J9 Cluster: Putative uncharacterized protein; n=3;
           Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein - Plasmodium berghei
          Length = 504

 Score = 34.7 bits (76), Expect = 2.3
 Identities = 15/42 (35%), Positives = 21/42 (50%)
 Frame = +1

Query: 553 SFYFESCFYKTRRSQNGS*VFTEVNYFGSMLLAIPCLCTILS 678
           SFYF  C   ++  +  + V  ++NYF   L   PC C  LS
Sbjct: 436 SFYFSQCTKGSKNEKIKNEVTNQINYFDKRLYTKPCKCMFLS 477


>UniRef50_A4VG49 Cluster: Putative uncharacterized protein; n=1;
           Pseudomonas stutzeri A1501|Rep: Putative uncharacterized
           protein - Pseudomonas stutzeri (strain A1501)
          Length = 86

 Score = 33.5 bits (73), Expect = 5.3
 Identities = 11/24 (45%), Positives = 19/24 (79%)
 Frame = +1

Query: 619 EVNYFGSMLLAIPCLCTILSSYRR 690
           EV Y G++LL + C+C ++++YRR
Sbjct: 7   EVLYLGALLLLVDCICCLIAAYRR 30


>UniRef50_Q7NC07 Cluster: Putative uncharacterized protein; n=1;
           Mycoplasma gallisepticum|Rep: Putative uncharacterized
           protein - Mycoplasma gallisepticum
          Length = 630

 Score = 33.1 bits (72), Expect = 7.0
 Identities = 17/57 (29%), Positives = 29/57 (50%)
 Frame = +1

Query: 196 YVNMDLLPYLSTLNFNSIS*NYCCNVNNILLYDLLNASTKKSRVNYNPRNPSFFCEI 366
           Y  +D+  + +   FN+   NY  N++N L Y+ L+A T   ++N N   P +   I
Sbjct: 291 YQMIDIFNFKNQNIFNTFQSNYTTNLDNYLYYNKLDAPTYSYQLNENNVLPRYLVNI 347


>UniRef50_Q23Q77 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 497

 Score = 33.1 bits (72), Expect = 7.0
 Identities = 23/78 (29%), Positives = 36/78 (46%), Gaps = 1/78 (1%)
 Frame = +1

Query: 223 LSTLNFNSIS*NYCCNVNNILLYDLLNASTKKSRVNYN-PRNPSFFCEICNFKEGCTVFT 399
           ++T N      N+    +  ++Y  LN      R + N  RNP FF +   FKE    F 
Sbjct: 247 ITTENIRLYDENFRIFYDENIIYIYLNYKLILQRFSINRTRNPYFFFDFSYFKE--RFFA 304

Query: 400 KQSVTKNGKGMFKWLSNN 453
           +Q+V ++ K  +   SNN
Sbjct: 305 RQNVIEDQKDKYNMQSNN 322


>UniRef50_Q5CRF2 Cluster: Putative uncharacterized protein; n=2;
           Cryptosporidium|Rep: Putative uncharacterized protein -
           Cryptosporidium parvum Iowa II
          Length = 838

 Score = 32.7 bits (71), Expect = 9.3
 Identities = 22/71 (30%), Positives = 31/71 (43%)
 Frame = +1

Query: 190 SKYVNMDLLPYLSTLNFNSIS*NYCCNVNNILLYDLLNASTKKSRVNYNPRNPSFFCEIC 369
           SKY N D   Y S    N     Y   +NN L  + +  S   +    N +NP  F EI 
Sbjct: 756 SKYDNFDHKRYRSYYKDNDHE--YLFQLNNFLNIECIYKSKLFTEAGNNIKNPQIFNEIV 813

Query: 370 NFKEGCTVFTK 402
           +F   C+ ++K
Sbjct: 814 DFDRLCSKWSK 824


>UniRef50_A5K0J2 Cluster: Putative uncharacterized protein; n=1;
            Plasmodium vivax|Rep: Putative uncharacterized protein -
            Plasmodium vivax
          Length = 1561

 Score = 32.7 bits (71), Expect = 9.3
 Identities = 16/43 (37%), Positives = 20/43 (46%)
 Frame = +1

Query: 256  NYCCNVNNILLYDLLNASTKKSRVNYNPRNPSFFCEICNFKEG 384
            NY C VNN         S K+  +N++ R   FFC  CN   G
Sbjct: 1505 NYKCTVNNCSKEFSSEFSLKEHIINFHHRVKRFFCSKCNMSFG 1547


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 572,319,795
Number of Sequences: 1657284
Number of extensions: 9588441
Number of successful extensions: 19220
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 18596
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19213
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 57851245060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)