Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P28_pT_B05
(616 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z73102-6|CAA97412.1| 522|Caenorhabditis elegans Hypothetical pr... 30 1.1
AF047661-4|AAC04435.2| 931|Caenorhabditis elegans Hypothetical ... 30 1.5
U21310-2|AAA62521.1| 322|Caenorhabditis elegans T box family pr... 29 3.5
U23181-6|AAC48204.1| 801|Caenorhabditis elegans Hypothetical pr... 28 4.6
AY818713-1|AAX35669.1| 691|Caenorhabditis elegans LIN-65S protein. 28 4.6
AY818712-1|AAX35668.1| 728|Caenorhabditis elegans LIN-65L protein. 28 4.6
AC025726-22|AAN73851.2| 512|Caenorhabditis elegans Abnormal cel... 28 4.6
AC025726-21|AAK73935.3| 728|Caenorhabditis elegans Abnormal cel... 28 4.6
U61953-3|AAC48071.3| 491|Caenorhabditis elegans Hypothetical pr... 28 6.1
AL021572-2|CAA16518.1| 415|Caenorhabditis elegans Hypothetical ... 28 6.1
AC024807-1|AAF59529.5| 704|Caenorhabditis elegans Hypothetical ... 28 6.1
U41992-7|AAA83358.1| 374|Caenorhabditis elegans Hypothetical pr... 27 8.1
>Z73102-6|CAA97412.1| 522|Caenorhabditis elegans Hypothetical
protein B0035.5 protein.
Length = 522
Score = 30.3 bits (65), Expect = 1.1
Identities = 19/63 (30%), Positives = 27/63 (42%), Gaps = 1/63 (1%)
Frame = -1
Query: 574 EKPSATDAEGSADSAAIIPNMVKKIDLAPTVESDAAAVPEIKTPEAADAPKLADN-PVDE 398
EKP++ +AE D + K ++L V A PE PEA+ K + P D
Sbjct: 280 EKPASLNAEDIRDEKVKVLKAAKVVELKDVVVGQYIASPEFDHPEASQGYKDDKSVPADS 339
Query: 397 DKP 389
P
Sbjct: 340 TTP 342
>AF047661-4|AAC04435.2| 931|Caenorhabditis elegans Hypothetical
protein M70.1 protein.
Length = 931
Score = 29.9 bits (64), Expect = 1.5
Identities = 14/43 (32%), Positives = 19/43 (44%)
Frame = -1
Query: 508 KKIDLAPTVESDAAAVPEIKTPEAADAPKLADNPVDEDKPADI 380
KK D P+ VP TP+ A P P ++KP D+
Sbjct: 812 KKKDTKPSAPKPKPDVPVNPTPQTAKVPVAPAPPAKDEKPKDV 854
>U21310-2|AAA62521.1| 322|Caenorhabditis elegans T box family
protein 11 protein.
Length = 322
Score = 28.7 bits (61), Expect = 3.5
Identities = 17/65 (26%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Frame = -1
Query: 580 KEEKPSATDAEGSADSAAIIPNMVKKI-DLAPTVESDAAAVPEIKTPEAADAPKLADNPV 404
+ E+ S +EG++ +I P KKI D+AP + D + + + ++ P +A+ P
Sbjct: 188 RRERQSPVYSEGTSSEKSISPPPAKKIKDMAPAL-PDYSVISKPNLLQSLIFPMIAEQPS 246
Query: 403 DEDKP 389
P
Sbjct: 247 TSQSP 251
>U23181-6|AAC48204.1| 801|Caenorhabditis elegans Hypothetical
protein ZK84.1 protein.
Length = 801
Score = 28.3 bits (60), Expect = 4.6
Identities = 22/77 (28%), Positives = 33/77 (42%), Gaps = 3/77 (3%)
Frame = -1
Query: 601 ATVAEISKEEKPSA--TDAEGSADSAAIIPNMVKKIDLAPTVESDAAAVPEIKTPEAADA 428
AT S E +A TD+ SAD+ A + + A + E+ A + +T A
Sbjct: 318 ATAPAPSSEAADAAAPTDSAASADTTAALVDTSSSEHAAESTEAPATDIAATETTPAPSV 377
Query: 427 P-KLADNPVDEDKPADI 380
P +AD D P+ I
Sbjct: 378 PAPVADAAAGYDSPSSI 394
>AY818713-1|AAX35669.1| 691|Caenorhabditis elegans LIN-65S protein.
Length = 691
Score = 28.3 bits (60), Expect = 4.6
Identities = 16/63 (25%), Positives = 27/63 (42%)
Frame = -1
Query: 595 VAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLAPTVESDAAAVPEIKTPEAADAPKLA 416
V ++ ++E + E + AA P AP E+ A+ P+ + PE D P +
Sbjct: 29 VIDMDEDEDVTTDGPESQEELAADAPAPGAPEASAPAQEASEASAPDQEAPEVQDVPDSS 88
Query: 415 DNP 407
P
Sbjct: 89 GAP 91
Score = 27.9 bits (59), Expect = 6.1
Identities = 25/76 (32%), Positives = 37/76 (48%), Gaps = 4/76 (5%)
Frame = -1
Query: 610 EVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLAPTVES----DAAAVPEIKTP 443
EVQ V + S SA +E S SA +P + D +S DA+A + P
Sbjct: 80 EVQ-DVPDSSGAPDASAQASEASDASAPEVPGSTEAQDAQDVPDSLGASDASAQEIPEAP 138
Query: 442 EAADAPKLADNPVDED 395
EA +AP++A +DE+
Sbjct: 139 EAPEAPEIAAE-IDEE 153
>AY818712-1|AAX35668.1| 728|Caenorhabditis elegans LIN-65L protein.
Length = 728
Score = 28.3 bits (60), Expect = 4.6
Identities = 16/63 (25%), Positives = 27/63 (42%)
Frame = -1
Query: 595 VAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLAPTVESDAAAVPEIKTPEAADAPKLA 416
V ++ ++E + E + AA P AP E+ A+ P+ + PE D P +
Sbjct: 66 VIDMDEDEDVTTDGPESQEELAADAPAPGAPEASAPAQEASEASAPDQEAPEVQDVPDSS 125
Query: 415 DNP 407
P
Sbjct: 126 GAP 128
Score = 27.9 bits (59), Expect = 6.1
Identities = 25/76 (32%), Positives = 37/76 (48%), Gaps = 4/76 (5%)
Frame = -1
Query: 610 EVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLAPTVES----DAAAVPEIKTP 443
EVQ V + S SA +E S SA +P + D +S DA+A + P
Sbjct: 117 EVQ-DVPDSSGAPDASAQASEASDASAPEVPGSTEAQDAQDVPDSLGASDASAQEIPEAP 175
Query: 442 EAADAPKLADNPVDED 395
EA +AP++A +DE+
Sbjct: 176 EAPEAPEIAAE-IDEE 190
>AC025726-22|AAN73851.2| 512|Caenorhabditis elegans Abnormal cell
lineage protein 65,isoform b protein.
Length = 512
Score = 28.3 bits (60), Expect = 4.6
Identities = 16/63 (25%), Positives = 27/63 (42%)
Frame = -1
Query: 595 VAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLAPTVESDAAAVPEIKTPEAADAPKLA 416
V ++ ++E + E + AA P AP E+ A+ P+ + PE D P +
Sbjct: 66 VIDMDEDEDVTTDGPESQEELAADAPAPGAPEASAPAQEASEASAPDQEAPEVQDVPDSS 125
Query: 415 DNP 407
P
Sbjct: 126 GAP 128
Score = 27.9 bits (59), Expect = 6.1
Identities = 25/76 (32%), Positives = 37/76 (48%), Gaps = 4/76 (5%)
Frame = -1
Query: 610 EVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLAPTVES----DAAAVPEIKTP 443
EVQ V + S SA +E S SA +P + D +S DA+A + P
Sbjct: 117 EVQ-DVPDSSGAPDASAQASEASDASAPEVPGSTEAQDAQDVPDSLGASDASAQEIPEAP 175
Query: 442 EAADAPKLADNPVDED 395
EA +AP++A +DE+
Sbjct: 176 EAPEAPEIAAE-IDEE 190
>AC025726-21|AAK73935.3| 728|Caenorhabditis elegans Abnormal cell
lineage protein 65,isoform a protein.
Length = 728
Score = 28.3 bits (60), Expect = 4.6
Identities = 16/63 (25%), Positives = 27/63 (42%)
Frame = -1
Query: 595 VAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLAPTVESDAAAVPEIKTPEAADAPKLA 416
V ++ ++E + E + AA P AP E+ A+ P+ + PE D P +
Sbjct: 66 VIDMDEDEDVTTDGPESQEELAADAPAPGAPEASAPAQEASEASAPDQEAPEVQDVPDSS 125
Query: 415 DNP 407
P
Sbjct: 126 GAP 128
Score = 27.9 bits (59), Expect = 6.1
Identities = 25/76 (32%), Positives = 37/76 (48%), Gaps = 4/76 (5%)
Frame = -1
Query: 610 EVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLAPTVES----DAAAVPEIKTP 443
EVQ V + S SA +E S SA +P + D +S DA+A + P
Sbjct: 117 EVQ-DVPDSSGAPDASAQASEASDASAPEVPGSTEAQDAQDVPDSLGASDASAQEIPEAP 175
Query: 442 EAADAPKLADNPVDED 395
EA +AP++A +DE+
Sbjct: 176 EAPEAPEIAAE-IDEE 190
>U61953-3|AAC48071.3| 491|Caenorhabditis elegans Hypothetical
protein R08C7.5 protein.
Length = 491
Score = 27.9 bits (59), Expect = 6.1
Identities = 22/62 (35%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Frame = -1
Query: 610 EVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLAPTVESDAAAVP-EIKTPEAA 434
++ TVA+ KE+KP + +A A I +V KI T ++ AVP E+K +AA
Sbjct: 335 KIPKTVAQPPKEKKPVMESVKTAAPPAKEIKPIVAKI----TEKAAEPAVPKEVKPAKAA 390
Query: 433 DA 428
A
Sbjct: 391 TA 392
>AL021572-2|CAA16518.1| 415|Caenorhabditis elegans Hypothetical
protein W06H3.2 protein.
Length = 415
Score = 27.9 bits (59), Expect = 6.1
Identities = 16/48 (33%), Positives = 24/48 (50%)
Frame = -1
Query: 544 SADSAAIIPNMVKKIDLAPTVESDAAAVPEIKTPEAADAPKLADNPVD 401
+A++ A P + +A S AA + PEA DAPK A+ P +
Sbjct: 356 TANAEAEEPEKKTFVTMAAACASKAAKEQDGVAPEAQDAPKEAEAPAE 403
>AC024807-1|AAF59529.5| 704|Caenorhabditis elegans Hypothetical
protein Y53G8AL.1 protein.
Length = 704
Score = 27.9 bits (59), Expect = 6.1
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = -1
Query: 511 VKKIDLAPTVESDAAAVPEIKTPEAADAPKLADNPVDEDKPADI 380
V +DL T E+ +PEI TP D+ + +N V+ + ++I
Sbjct: 289 VPSLDLEETTENPE--IPEISTPREEDSAENLENLVENSEKSEI 330
>U41992-7|AAA83358.1| 374|Caenorhabditis elegans Hypothetical
protein F32E10.6 protein.
Length = 374
Score = 27.5 bits (58), Expect = 8.1
Identities = 18/64 (28%), Positives = 28/64 (43%)
Frame = -1
Query: 583 SKEEKPSATDAEGSADSAAIIPNMVKKIDLAPTVESDAAAVPEIKTPEAADAPKLADNPV 404
SK K +A+D + + A + K P E D +KTP+ K A+ P
Sbjct: 218 SKSTKRAASDDDEEEEPVATKKSKKSKRAETPEEEDDEEE-EVVKTPKKTKKSKRAETPE 276
Query: 403 DEDK 392
+ED+
Sbjct: 277 EEDE 280
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,453,696
Number of Sequences: 27780
Number of extensions: 139518
Number of successful extensions: 488
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 461
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 487
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1332243108
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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