Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_pT_B04
         (739 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    25   0.64 
AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    24   1.1  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    22   4.5  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    22   4.5  

>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 25.0 bits (52), Expect = 0.64
 Identities = 12/38 (31%), Positives = 18/38 (47%)
 Frame = -2

Query: 378 RSQYTHRTPMDMANRNSWFWIGSFDSFNCNY*SRKIKA 265
           +  Y  R P +  N N  FW+G  D+    Y +  +KA
Sbjct: 369 KGSYIFRLPDE--NNNGGFWVGYEDTDTAGYKASYVKA 404


>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +3

Query: 111 KNKPTYLYCFFYLTNRTEKLSN 176
           KN  TY++  FYL+ R   L N
Sbjct: 197 KNCVTYVFDLFYLSKRASDLCN 218


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = +3

Query: 108 KKNKPTYLYCFFYLTNRTEKLSNT*LFKCIKN 203
           K++K  Y Y  FY+T+ T  LS   LF+   N
Sbjct: 49  KQHKSDYFYFSFYITSYT-LLSVYSLFRIATN 79


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = +3

Query: 108 KKNKPTYLYCFFYLTNRTEKLSNT*LFKCIKN 203
           K++K  Y Y  FY+T+ T  LS   LF+   N
Sbjct: 49  KQHKSDYFYFSFYITSYT-LLSVYSLFRIATN 79


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 177,899
Number of Sequences: 336
Number of extensions: 3992
Number of successful extensions: 9
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19779950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)