Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P28_pT_B04
(739 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U88167-3|AAB42224.2| 363|Caenorhabditis elegans Hypothetical pr... 68 6e-12
AC006834-9|AAL11490.1| 447|Caenorhabditis elegans Hypothetical ... 46 4e-05
Z37139-1|CAA85491.1| 485|Caenorhabditis elegans Hypothetical pr... 38 0.006
U95074-1|AAB94647.1| 485|Caenorhabditis elegans protein disulph... 38 0.006
AL021487-12|CAA16358.2| 324|Caenorhabditis elegans Hypothetical... 35 0.052
U40411-4|AAC47065.1| 440|Caenorhabditis elegans Temporarily ass... 34 0.091
AF024492-4|AAF98617.1| 848|Caenorhabditis elegans Hypothetical ... 34 0.091
Z98866-5|CAB11548.1| 436|Caenorhabditis elegans Hypothetical pr... 33 0.21
L15188-9|AAM22024.1| 618|Caenorhabditis elegans Hypothetical pr... 33 0.28
AF106589-2|AAC78230.1| 107|Caenorhabditis elegans Hypothetical ... 32 0.37
AF024492-3|AAF98619.1| 918|Caenorhabditis elegans Hypothetical ... 31 0.85
U41542-8|AAN39682.1| 437|Caenorhabditis elegans Protein disulfi... 29 2.6
U41542-7|ABO16445.1| 371|Caenorhabditis elegans Protein disulfi... 29 2.6
U41542-6|AAK39152.1| 493|Caenorhabditis elegans Protein disulfi... 29 2.6
U23169-7|AAL02449.1| 512|Caenorhabditis elegans Arginyl aa-trna... 29 3.4
AF067623-4|AAC17556.2| 393|Caenorhabditis elegans Hypothetical ... 29 3.4
Z49126-5|CAA88940.3| 1270|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z81458-2|CAB03822.1| 386|Caenorhabditis elegans Hypothetical pr... 28 6.0
AL132902-7|CAB81993.1| 485|Caenorhabditis elegans Hypothetical ... 28 6.0
U88310-3|AAB42337.1| 608|Caenorhabditis elegans Hypothetical pr... 28 7.9
AF043703-3|AAK21500.1| 357|Caenorhabditis elegans Calcium chann... 28 7.9
>U88167-3|AAB42224.2| 363|Caenorhabditis elegans Hypothetical
protein D2092.4 protein.
Length = 363
Score = 68.1 bits (159), Expect = 6e-12
Identities = 46/153 (30%), Positives = 75/153 (49%), Gaps = 2/153 (1%)
Frame = -3
Query: 725 VMFYGAACVECQRLHAVWESVGATLKSRINVARIDASLAGVNTAKRFHVGK--LPAFLLF 552
VMFY A +WE+V L+ +NV +I+ S+ + +RFH+ + P FLLF
Sbjct: 211 VMFYDADEGNSNAFVPLWETVAHKLRGLVNVGKIEISVND-DVTERFHIEERDCPVFLLF 269
Query: 551 RLGKVYRYDLPXNDVKSFVAFAQDWYKNSKGEPVAVLASPFDDVVNWCVEMLKWGIAFGL 372
GK+YRY D +S FA YK +G V + + V + E + +
Sbjct: 270 HRGKMYRYKESAKDARSLTNFALHKYKEQRGHRVPEPPTAIEQVYEFAKEKI-------M 322
Query: 371 NILTEHPWIWQIGIAGFGLVALTALIAIIKAGR 273
+I+ ++ + +G+ GL+ + A+ IIKA R
Sbjct: 323 DIMDDNQTLSVLGVG--GLIVIVAVTLIIKAYR 353
>AC006834-9|AAL11490.1| 447|Caenorhabditis elegans Hypothetical
protein ZK973.11 protein.
Length = 447
Score = 45.6 bits (103), Expect = 4e-05
Identities = 28/84 (33%), Positives = 40/84 (47%), Gaps = 3/84 (3%)
Frame = -3
Query: 725 VMFYGAACVECQRLHAVWESVGATLKSR---INVARIDASLAGVNTAKRFHVGKLPAFLL 555
V FY C C+RLH VW+ VG TL I V ++D + A + + P L
Sbjct: 48 VEFYAPWCAHCKRLHPVWDQVGHTLSDSNLPIRVGKLDCTRFPA-VANKLSIQGYPTILF 106
Query: 554 FRLGKVYRYDLPXNDVKSFVAFAQ 483
FR G V Y + ++ V+FA+
Sbjct: 107 FRNGHVIDY-RGGREKEALVSFAK 129
>Z37139-1|CAA85491.1| 485|Caenorhabditis elegans Hypothetical
protein C14B1.1 protein.
Length = 485
Score = 38.3 bits (85), Expect = 0.006
Identities = 30/101 (29%), Positives = 42/101 (41%), Gaps = 3/101 (2%)
Frame = -3
Query: 728 VVMFYGAACVECQRLHAVWESVGATLK---SRINVARIDASLAGVNTAKRFHVGKLPAFL 558
+V FY CV C+ L ++ LK S I +A++DA+ A +F V P L
Sbjct: 44 LVKFYAPWCVHCKSLAPKYDEAADLLKEEGSDIKLAKVDAT-ENQALASKFEVRGYPTIL 102
Query: 557 LFRLGKVYRYDLPXNDVKSFVAFAQDWYKNSKGEPVAVLAS 435
F+ GK +Y A DW K G V + S
Sbjct: 103 YFKSGKPTKY-----TGGRATAQIVDWVKKKSGPTVTTVES 138
Score = 31.1 bits (67), Expect = 0.85
Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Frame = -3
Query: 725 VMFYGAACVECQRLHAVWESVGATLKSRINV--ARIDASLAGVNTAKRFHVGKLPAFLLF 552
V FY C C++L VW+ + +S NV A++DA+L N V P L+
Sbjct: 386 VKFYAPWCGHCKQLVPVWDELAEKYESNPNVVIAKLDATL---NELADVKVNSFPTLKLW 442
Query: 551 RLG 543
G
Sbjct: 443 PAG 445
>U95074-1|AAB94647.1| 485|Caenorhabditis elegans protein disulphide
isomerase isoformI protein.
Length = 485
Score = 38.3 bits (85), Expect = 0.006
Identities = 30/101 (29%), Positives = 42/101 (41%), Gaps = 3/101 (2%)
Frame = -3
Query: 728 VVMFYGAACVECQRLHAVWESVGATLK---SRINVARIDASLAGVNTAKRFHVGKLPAFL 558
+V FY CV C+ L ++ LK S I +A++DA+ A +F V P L
Sbjct: 44 LVKFYAPWCVHCKSLAPKYDEAADLLKEEGSDIKLAKVDAT-ENQALASKFEVRGYPTIL 102
Query: 557 LFRLGKVYRYDLPXNDVKSFVAFAQDWYKNSKGEPVAVLAS 435
F+ GK +Y A DW K G V + S
Sbjct: 103 YFKSGKPTKY-----TGGRATAQIVDWVKKKSGPTVTTVES 138
Score = 31.1 bits (67), Expect = 0.85
Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Frame = -3
Query: 725 VMFYGAACVECQRLHAVWESVGATLKSRINV--ARIDASLAGVNTAKRFHVGKLPAFLLF 552
V FY C C++L VW+ + +S NV A++DA+L N V P L+
Sbjct: 386 VKFYAPWCGHCKQLVPVWDELAEKYESNPNVVIAKLDATL---NELADVKVNSFPTLKLW 442
Query: 551 RLG 543
G
Sbjct: 443 PAG 445
>AL021487-12|CAA16358.2| 324|Caenorhabditis elegans Hypothetical
protein Y45F10B.6 protein.
Length = 324
Score = 35.1 bits (77), Expect = 0.052
Identities = 27/99 (27%), Positives = 44/99 (44%), Gaps = 12/99 (12%)
Frame = +1
Query: 64 KNFKQFYNSTCASLIKKINPHICTVFFTLQTGRKSYQTHDFLNALRI-----------IS 210
K FK F+ S ++ +NPH+ V Q Y D+L +RI I
Sbjct: 46 KVFKVFWGSLFEKRMESLNPHVFLVIVVSQLTSILYMISDYL-TIRIPFTGAITSWCAIQ 104
Query: 211 QKNRF-SYLRFLSFFVSFSGFDLPALIIAIKAVKATNPK 324
Q N F L FLS + +F+ + P+L+ ++ + P+
Sbjct: 105 QPNHFLKILFFLSIYFTFTSWLFPSLLSTLRVISIYFPQ 143
>U40411-4|AAC47065.1| 440|Caenorhabditis elegans Temporarily
assigned gene nameprotein 320 protein.
Length = 440
Score = 34.3 bits (75), Expect = 0.091
Identities = 16/62 (25%), Positives = 30/62 (48%)
Frame = -3
Query: 728 VVMFYGAACVECQRLHAVWESVGATLKSRINVARIDASLAGVNTAKRFHVGKLPAFLLFR 549
+V F+ C C+ L W++ + LK ++ + +DA++ V A +F + P F
Sbjct: 186 LVEFFAPWCGHCKSLEPQWKAAASELKGKVRLGALDATVHTV-VANKFAIRGFPTIKYFA 244
Query: 548 LG 543
G
Sbjct: 245 PG 246
>AF024492-4|AAF98617.1| 848|Caenorhabditis elegans Hypothetical
protein F14F9.3 protein.
Length = 848
Score = 34.3 bits (75), Expect = 0.091
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = -2
Query: 651 KEQNKCCSH*CKFSWCQHC*KISCWKI 571
K QN+ C C +SWC+HC K+ W +
Sbjct: 588 KTQNRSCP--CGYSWCRHCNKVPHWPL 612
>Z98866-5|CAB11548.1| 436|Caenorhabditis elegans Hypothetical
protein Y49E10.4 protein.
Length = 436
Score = 33.1 bits (72), Expect = 0.21
Identities = 16/62 (25%), Positives = 28/62 (45%)
Frame = -3
Query: 728 VVMFYGAACVECQRLHAVWESVGATLKSRINVARIDASLAGVNTAKRFHVGKLPAFLLFR 549
+V F+ C CQ+L W+ + R+ +DA+ A + A++F + P F
Sbjct: 176 MVEFFAPWCGHCQKLEPEWKKAAEEMGGRVKFGALDAT-AHESIAQKFGIRGFPTIKFFA 234
Query: 548 LG 543
G
Sbjct: 235 PG 236
>L15188-9|AAM22024.1| 618|Caenorhabditis elegans Hypothetical
protein C14B9.2 protein.
Length = 618
Score = 32.7 bits (71), Expect = 0.28
Identities = 18/73 (24%), Positives = 36/73 (49%), Gaps = 3/73 (4%)
Frame = -3
Query: 728 VVMFYGAACVECQRLHAVWESVGATLK---SRINVARIDASLAGVNTAKRFHVGKLPAFL 558
+V FY C C++L +E LK S++ + ++DA++ + ++ V P
Sbjct: 168 LVEFYAPWCGHCKKLAPEYEKAAQKLKAQGSKVKLGKVDATIE-KDLGTKYGVSGYPTMK 226
Query: 557 LFRLGKVYRYDLP 519
+ R G+ + Y+ P
Sbjct: 227 IIRNGRRFDYNGP 239
>AF106589-2|AAC78230.1| 107|Caenorhabditis elegans Hypothetical
protein Y44E3A.3 protein.
Length = 107
Score = 32.3 bits (70), Expect = 0.37
Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = -3
Query: 728 VVMFYGAA-CVECQRLHAVWESVGATLKSRINVARIDASLAGVNTAKRFHVGKLPAFLL 555
V++F+ A+ C CQ + E + A K R+++ +ID + + + +P FLL
Sbjct: 23 VILFFTASWCGPCQMIKPRVEELAAEHKDRLSILKIDVDECD-GVGEEYEINSMPTFLL 80
>AF024492-3|AAF98619.1| 918|Caenorhabditis elegans Hypothetical
protein F14F9.4 protein.
Length = 918
Score = 31.1 bits (67), Expect = 0.85
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = -2
Query: 651 KEQNKCCSH*CKFSWCQHC*KISCWKI 571
K QN+ C C +SWC+ C K+ W +
Sbjct: 655 KTQNRSCP--CGYSWCRQCNKVPHWPL 679
>U41542-8|AAN39682.1| 437|Caenorhabditis elegans Protein disulfide
isomerase protein2, isoform b protein.
Length = 437
Score = 29.5 bits (63), Expect = 2.6
Identities = 24/97 (24%), Positives = 39/97 (40%), Gaps = 4/97 (4%)
Frame = -3
Query: 737 RRXVVMFYGAACVECQRLHAVWESVGATL--KSRINVARIDASLAGVNTAKRFHVGKLPA 564
+ +V FY C C++L W+ +G I +A++D++L V K + P
Sbjct: 326 KNVLVEFYAPWCGHCKQLAPTWDKLGEKFADDESIVIAKMDSTLNEVEDVK---IQSFPT 382
Query: 563 FLLFRLG--KVYRYDLPXNDVKSFVAFAQDWYKNSKG 459
F G KV Y ++ F F + K G
Sbjct: 383 IKFFPAGSNKVVDY-TGDRTIEGFTKFLETNGKEGAG 418
>U41542-7|ABO16445.1| 371|Caenorhabditis elegans Protein disulfide
isomerase protein2, isoform c protein.
Length = 371
Score = 29.5 bits (63), Expect = 2.6
Identities = 24/97 (24%), Positives = 39/97 (40%), Gaps = 4/97 (4%)
Frame = -3
Query: 737 RRXVVMFYGAACVECQRLHAVWESVGATL--KSRINVARIDASLAGVNTAKRFHVGKLPA 564
+ +V FY C C++L W+ +G I +A++D++L V K + P
Sbjct: 260 KNVLVEFYAPWCGHCKQLAPTWDKLGEKFADDESIVIAKMDSTLNEVEDVK---IQSFPT 316
Query: 563 FLLFRLG--KVYRYDLPXNDVKSFVAFAQDWYKNSKG 459
F G KV Y ++ F F + K G
Sbjct: 317 IKFFPAGSNKVVDY-TGDRTIEGFTKFLETNGKEGAG 352
>U41542-6|AAK39152.1| 493|Caenorhabditis elegans Protein disulfide
isomerase protein2, isoform a protein.
Length = 493
Score = 29.5 bits (63), Expect = 2.6
Identities = 24/97 (24%), Positives = 39/97 (40%), Gaps = 4/97 (4%)
Frame = -3
Query: 737 RRXVVMFYGAACVECQRLHAVWESVGATL--KSRINVARIDASLAGVNTAKRFHVGKLPA 564
+ +V FY C C++L W+ +G I +A++D++L V K + P
Sbjct: 382 KNVLVEFYAPWCGHCKQLAPTWDKLGEKFADDESIVIAKMDSTLNEVEDVK---IQSFPT 438
Query: 563 FLLFRLG--KVYRYDLPXNDVKSFVAFAQDWYKNSKG 459
F G KV Y ++ F F + K G
Sbjct: 439 IKFFPAGSNKVVDY-TGDRTIEGFTKFLETNGKEGAG 474
>U23169-7|AAL02449.1| 512|Caenorhabditis elegans Arginyl aa-trna
synthetase protein2 protein.
Length = 512
Score = 29.1 bits (62), Expect = 3.4
Identities = 21/52 (40%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = -3
Query: 629 RIDASLAGVNTAKRFHVGKLPAFLLFR-LGKVYRYDLPXNDVKSFVAFAQDW 477
RI + N AK+FHVG L + L+ R + KV R + N+V S V + DW
Sbjct: 35 RIVVDFSSPNIAKQFHVGNLRSTLIGRYVDKVSR--VMGNEVTS-VNYLGDW 83
>AF067623-4|AAC17556.2| 393|Caenorhabditis elegans Hypothetical
protein T26C12.3 protein.
Length = 393
Score = 29.1 bits (62), Expect = 3.4
Identities = 19/50 (38%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Frame = +2
Query: 566 LAIFQHEIF*QC*HQLNLHQCEQHLFCS-LMLLQHFPKQHVAFGIQHKLP 712
L IF+ I QC H L L C Q LF S L H + GI ++P
Sbjct: 114 LQIFEQPISLQCGHSLCLICCNQLLFSSPPALTSHLNRPIPRMGISQRVP 163
>Z49126-5|CAA88940.3| 1270|Caenorhabditis elegans Hypothetical
protein DH11.3 protein.
Length = 1270
Score = 28.7 bits (61), Expect = 4.5
Identities = 10/36 (27%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = -3
Query: 392 WGIAFGL-NILTEHPWIWQIGIAGFGLVALTALIAI 288
W IA + ++L P++W++G+ G G+ L + ++
Sbjct: 837 WFIAGTIFSLLLAFPFVWELGVLGLGITILLTIFSL 872
>Z81458-2|CAB03822.1| 386|Caenorhabditis elegans Hypothetical
protein C03E10.3 protein.
Length = 386
Score = 28.3 bits (60), Expect = 6.0
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = +1
Query: 127 ICTVFFTLQTGRKSYQTHDFLNALRIISQKNRFSYLRFLSFFVSF 261
+ +FF +Q S+ + FLN L + S + + YL +L F SF
Sbjct: 331 VIKMFFNIQFREPSFSNNCFLNILYLSSNQITYIYL-YLFFVTSF 374
>AL132902-7|CAB81993.1| 485|Caenorhabditis elegans Hypothetical
protein Y71A12B.8 protein.
Length = 485
Score = 28.3 bits (60), Expect = 6.0
Identities = 12/24 (50%), Positives = 17/24 (70%), Gaps = 1/24 (4%)
Frame = +3
Query: 402 FYTPIH-HIIKW*GKNCNRFSFRV 470
F+TPI H++K+ GKN RF + V
Sbjct: 400 FHTPIALHVLKYLGKNVKRFKYSV 423
>U88310-3|AAB42337.1| 608|Caenorhabditis elegans Hypothetical
protein C24G7.1 protein.
Length = 608
Score = 27.9 bits (59), Expect = 7.9
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +1
Query: 346 IHGCSVSILRPNAIPHFSISTHQFTTSSNGEARTATGS 459
++G + PN IPH +S+ +FT + N A TA S
Sbjct: 297 VNGFQYFVHPPNTIPH--LSSDEFTVTPNSVAYTAISS 332
>AF043703-3|AAK21500.1| 357|Caenorhabditis elegans Calcium channel,
beta subunit protein2 protein.
Length = 357
Score = 27.9 bits (59), Expect = 7.9
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +2
Query: 620 HQCEQHLFCSLMLLQHFPKQHVAFGIQ 700
H+ + F +L LQH ++HVAF +Q
Sbjct: 37 HRKDVEHFAALRALQHSKRKHVAFAVQ 63
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,631,456
Number of Sequences: 27780
Number of extensions: 356949
Number of successful extensions: 1006
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 967
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1004
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1735436670
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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