Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_pT_B02
         (356 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    25   1.1  
CR954256-1|CAJ14142.1|  376|Anopheles gambiae actin protein.           22   7.9  
AY500851-1|AAS77205.1|  605|Anopheles gambiae G-protein coupled ...    22   7.9  

>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
            channel alpha subunitprotein.
          Length = 2139

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 16/72 (22%), Positives = 33/72 (45%), Gaps = 1/72 (1%)
 Frame = -2

Query: 232  VYILFWL*FIEVLIQ*YAALHYNLTVENKQTVSCKLGCLPTFDKITTRRTRW-SFQQNFV 56
            V ++FWL F  + +Q +A  ++    +NK T+  ++  +P  +        W +   NF 
Sbjct: 1440 VCLIFWLIFAIMGVQLFAGKYFKCVDKNKTTLPHEI--IPDVNACKAENYSWENSPMNFD 1497

Query: 55   FIKK*FYSIIYV 20
             + K +  +  V
Sbjct: 1498 HVGKAYLCLFQV 1509


>CR954256-1|CAJ14142.1|  376|Anopheles gambiae actin protein.
          Length = 376

 Score = 21.8 bits (44), Expect = 7.9
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +2

Query: 26  YN*IKLLLNKHEVLLK*PPSSPCSN 100
           YN +++   +H VLL   P +P SN
Sbjct: 92  YNELRVAPEEHPVLLTEAPLNPKSN 116


>AY500851-1|AAS77205.1|  605|Anopheles gambiae G-protein coupled
           receptor 3 protein.
          Length = 605

 Score = 21.8 bits (44), Expect = 7.9
 Identities = 6/14 (42%), Positives = 11/14 (78%)
 Frame = -2

Query: 259 VNIYIIAWSVYILF 218
           V ++++ WS YI+F
Sbjct: 460 VIVFVLCWSPYIIF 473


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 334,888
Number of Sequences: 2352
Number of extensions: 5297
Number of successful extensions: 9
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 563,979
effective HSP length: 57
effective length of database: 429,915
effective search space used: 26224815
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)