Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_pT_A24
         (783 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL121914-1|CAC12716.1|  192|Homo sapiens chromosome 20 open read...    68   4e-11
AK075565-1|BAC11704.1|  192|Homo sapiens protein ( Homo sapiens ...    68   4e-11
AJ311123-1|CAC67490.1|  192|Homo sapiens hypothetical protein pr...    68   4e-11
BC017725-1|AAH17725.1|  192|Homo sapiens chromosome 20 open read...    66   1e-10

>AL121914-1|CAC12716.1|  192|Homo sapiens chromosome 20 open reading
           frame 108 protein.
          Length = 192

 Score = 67.7 bits (158), Expect = 4e-11
 Identities = 30/66 (45%), Positives = 41/66 (62%)
 Frame = -2

Query: 221 NGVDLVAILKYLNIEEGTVLKAAGSNAGTFVIAYTVHKIFAPFRIAITLTATPFXVRHLR 42
           +GVD+ AIL  L  +E  V     +   TFV+AY +HK+FAP RI+ITL + P  VR+ R
Sbjct: 121 SGVDMPAILLKLGFKESLVQSKMAAGTSTFVVAYAIHKLFAPVRISITLVSVPLIVRYFR 180

Query: 41  NIGILK 24
            +G  K
Sbjct: 181 KVGFFK 186


>AK075565-1|BAC11704.1|  192|Homo sapiens protein ( Homo sapiens
           cDNA PSEC0265 fis, clone NT2RP3003235. ).
          Length = 192

 Score = 67.7 bits (158), Expect = 4e-11
 Identities = 30/66 (45%), Positives = 41/66 (62%)
 Frame = -2

Query: 221 NGVDLVAILKYLNIEEGTVLKAAGSNAGTFVIAYTVHKIFAPFRIAITLTATPFXVRHLR 42
           +GVD+ AIL  L  +E  V     +   TFV+AY +HK+FAP RI+ITL + P  VR+ R
Sbjct: 121 SGVDMPAILLKLGFKESLVQSKMAAGTSTFVVAYAIHKLFAPVRISITLVSVPLIVRYFR 180

Query: 41  NIGILK 24
            +G  K
Sbjct: 181 KVGFFK 186


>AJ311123-1|CAC67490.1|  192|Homo sapiens hypothetical protein
           protein.
          Length = 192

 Score = 67.7 bits (158), Expect = 4e-11
 Identities = 30/66 (45%), Positives = 41/66 (62%)
 Frame = -2

Query: 221 NGVDLVAILKYLNIEEGTVLKAAGSNAGTFVIAYTVHKIFAPFRIAITLTATPFXVRHLR 42
           +GVD+ AIL  L  +E  V     +   TFV+AY +HK+FAP RI+ITL + P  VR+ R
Sbjct: 121 SGVDMPAILLKLGFKESLVQSKMAAGTSTFVVAYAIHKLFAPVRISITLVSVPLIVRYFR 180

Query: 41  NIGILK 24
            +G  K
Sbjct: 181 KVGFFK 186


>BC017725-1|AAH17725.1|  192|Homo sapiens chromosome 20 open reading
           frame 108 protein.
          Length = 192

 Score = 66.1 bits (154), Expect = 1e-10
 Identities = 29/66 (43%), Positives = 40/66 (60%)
 Frame = -2

Query: 221 NGVDLVAILKYLNIEEGTVLKAAGSNAGTFVIAYTVHKIFAPFRIAITLTATPFXVRHLR 42
           +GVD+ AIL  L  +E  V     +   TFV+AY +HK+F P RI+ITL + P  VR+ R
Sbjct: 121 SGVDMPAILLKLGFKESLVQSKMAAGTSTFVVAYAIHKLFVPVRISITLVSVPLIVRYFR 180

Query: 41  NIGILK 24
            +G  K
Sbjct: 181 KVGFFK 186


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,196,572
Number of Sequences: 237096
Number of extensions: 2507916
Number of successful extensions: 7821
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6979
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7821
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9534535578
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)