Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P28_pT_A17
(529 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
S78459-1|AAB34403.1| 50|Apis mellifera mast cell-degranulating... 25 0.48
AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein. 23 1.5
AB095513-1|BAC76335.1| 39|Apis mellifera brood-complex protein. 23 1.5
AF469010-1|AAL93136.1| 678|Apis mellifera cGMP-dependent protei... 23 1.9
DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex det... 23 2.6
DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex det... 23 2.6
DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex det... 21 5.9
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 21 7.8
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 21 7.8
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 21 7.8
AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. 21 7.8
>S78459-1|AAB34403.1| 50|Apis mellifera mast cell-degranulating
peptide protein.
Length = 50
Score = 25.0 bits (52), Expect = 0.48
Identities = 13/29 (44%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Frame = +2
Query: 158 MISLI*CNFFIV-VTIIMGNFVNRTRNIK 241
MIS++ C FF + V +I FV T +IK
Sbjct: 1 MISMLRCTFFFLSVILITSYFVTPTMSIK 29
>AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein.
Length = 429
Score = 23.4 bits (48), Expect = 1.5
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = +1
Query: 16 QHITTEWQNIQILITNVYLQNIKD 87
QH W N Q IT+ + +N++D
Sbjct: 5 QHFCLRWNNYQSSITSAF-ENLRD 27
>AB095513-1|BAC76335.1| 39|Apis mellifera brood-complex protein.
Length = 39
Score = 23.4 bits (48), Expect = 1.5
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = +1
Query: 16 QHITTEWQNIQILITNVYLQNIKD 87
QH W N Q IT+ + +N++D
Sbjct: 5 QHFCLRWNNYQSSITSAF-ENLRD 27
>AF469010-1|AAL93136.1| 678|Apis mellifera cGMP-dependent protein
kinase foraging protein.
Length = 678
Score = 23.0 bits (47), Expect = 1.9
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -3
Query: 320 NDFSTNQQ*TKTRL*RRVIMSCSF 249
NDF N + T+ R R + +SCSF
Sbjct: 100 NDFMKNLELTQIRRDRGLHVSCSF 123
>DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 22.6 bits (46), Expect = 2.6
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = +1
Query: 187 YSGNNHNG*FCKSYKK 234
Y+ NN+ +C +YKK
Sbjct: 91 YNNNNYKKLYCNNYKK 106
>DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 22.6 bits (46), Expect = 2.6
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = +1
Query: 187 YSGNNHNG*FCKSYKK 234
Y+ NN+ +C +YKK
Sbjct: 91 YNNNNYKKLYCNNYKK 106
>DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.4 bits (43), Expect = 5.9
Identities = 6/16 (37%), Positives = 11/16 (68%)
Frame = +1
Query: 187 YSGNNHNG*FCKSYKK 234
Y+ NN+ +C +Y+K
Sbjct: 91 YNNNNYKKLYCNNYRK 106
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 21.0 bits (42), Expect = 7.8
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +2
Query: 230 RNIKSYQMSKTL*LFFIVLSLFTVDLSKSHYEVLFFSQRR 349
R + Q + T+ + ++LSL + D S YEV F Q++
Sbjct: 77 RLLPPVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQQ 116
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 21.0 bits (42), Expect = 7.8
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +2
Query: 230 RNIKSYQMSKTL*LFFIVLSLFTVDLSKSHYEVLFFSQRR 349
R + Q + T+ + ++LSL + D S YEV F Q++
Sbjct: 77 RLLPPVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQQ 116
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 21.0 bits (42), Expect = 7.8
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +2
Query: 230 RNIKSYQMSKTL*LFFIVLSLFTVDLSKSHYEVLFFSQRR 349
R + Q + T+ + ++LSL + D S YEV F Q++
Sbjct: 77 RLLPPVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQQ 116
>AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein.
Length = 652
Score = 21.0 bits (42), Expect = 7.8
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = +1
Query: 16 QHITTEWQNIQILITNVYLQ 75
QH W N Q +T+V+ Q
Sbjct: 9 QHYCLRWNNYQSNMTSVFHQ 28
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 139,534
Number of Sequences: 438
Number of extensions: 3003
Number of successful extensions: 15
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14845611
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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