Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P28_pT_A14
(814 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U61954-5|AAK29812.1| 575|Caenorhabditis elegans Hypothetical pr... 38 0.011
Z81055-4|CAB02893.1| 824|Caenorhabditis elegans Hypothetical pr... 32 0.42
Z80224-1|CAB02323.1| 1577|Caenorhabditis elegans Hypothetical pr... 31 0.74
Z67755-10|CAA91761.1| 1577|Caenorhabditis elegans Hypothetical p... 31 0.74
Z67754-4|CAA91753.1| 1577|Caenorhabditis elegans Hypothetical pr... 31 0.74
U41014-3|AAK32948.1| 519|Caenorhabditis elegans Hypothetical pr... 31 0.98
Z68006-3|CAA91997.2| 633|Caenorhabditis elegans Hypothetical pr... 31 1.3
Z29094-7|CAA82342.2| 453|Caenorhabditis elegans Hypothetical pr... 30 1.7
U50301-9|AAB37047.1| 305|Caenorhabditis elegans Hypothetical pr... 30 2.3
AF078792-2|AAC26946.1| 512|Caenorhabditis elegans Hypothetical ... 30 2.3
AF039713-10|AAB96721.1| 691|Caenorhabditis elegans Hypothetical... 30 2.3
U58751-3|AAN84880.1| 667|Caenorhabditis elegans Pctaire class c... 29 3.0
U58751-2|AAL00852.1| 700|Caenorhabditis elegans Pctaire class c... 29 3.0
Z81587-2|CAB04702.2| 339|Caenorhabditis elegans Hypothetical pr... 29 5.2
U40802-11|AAK19013.1| 194|Caenorhabditis elegans Hypothetical p... 29 5.2
X70833-1|CAA50181.1| 575|Caenorhabditis elegans Cytoplasmic int... 28 6.9
U64858-3|AAN84865.1| 1250|Caenorhabditis elegans Roller: helical... 28 6.9
U64858-1|AAN84864.1| 2456|Caenorhabditis elegans Roller: helical... 28 6.9
U29379-3|AAF99979.3| 558|Caenorhabditis elegans Intermediate fi... 28 6.9
Z75525-2|CAA99763.1| 1390|Caenorhabditis elegans Hypothetical pr... 28 9.1
Z70309-13|CAL36512.2| 383|Caenorhabditis elegans Hypothetical p... 28 9.1
Z70309-12|CAB54293.3| 413|Caenorhabditis elegans Hypothetical p... 28 9.1
Z70309-11|CAB54291.3| 408|Caenorhabditis elegans Hypothetical p... 28 9.1
L23645-9|AAK26134.1| 1226|Caenorhabditis elegans Hypothetical pr... 28 9.1
>U61954-5|AAK29812.1| 575|Caenorhabditis elegans Hypothetical
protein F41H10.4 protein.
Length = 575
Score = 37.5 bits (83), Expect = 0.011
Identities = 36/154 (23%), Positives = 69/154 (44%), Gaps = 9/154 (5%)
Frame = -3
Query: 515 NMSCENFK---KYFMNYNLIDMLNVIVYEKINSLKNFGNRYAIYKPSLLEEFRTLNWLLE 345
++ ENFK + +N+++ L + EK+ L + +E ++ N L
Sbjct: 256 SLKAENFKLVSENQLNHDVSKNLAALQSEKLK-LTEISQQEISGLKKKIEVLKSENHRLS 314
Query: 344 NKLLFEIKHKAINYEDEDEIECFILAKRRKLHIDSLENLVLDDKD-----STMVEENITN 180
+++ A N+E E +L R +L +D L+ DK+ T +EE + +
Sbjct: 315 SQIQQNTNEAAKNHEKLLEDRVLLLETRYQLEVDDLKKSFESDKECFLLKMTSLEEKLKS 374
Query: 179 A-EDGISKYRNCTEAVKQLEMQLEEGRQKSIEFE 81
A ED + VK+L+ L+E R+++ +E
Sbjct: 375 AEEDKKLAVKKAMSLVKELQKSLKEERKRADSYE 408
>Z81055-4|CAB02893.1| 824|Caenorhabditis elegans Hypothetical
protein F01G10.5 protein.
Length = 824
Score = 32.3 bits (70), Expect = 0.42
Identities = 32/125 (25%), Positives = 57/125 (45%)
Frame = -3
Query: 383 LLEEFRTLNWLLENKLLFEIKHKAINYEDEDEIECFILAKRRKLHIDSLENLVLDDKDST 204
++E+ +T++ L E KL ++K + +D E E ++ K ID L ++ D
Sbjct: 316 IVEQLKTVSELNE-KLTMQVK----DLQDASENELASFRQKEKELIDELRMATNENVDLE 370
Query: 203 MVEENITNAEDGISKYRNCTEAVKQLEMQLEEGRQKSIEFENMLQAARANVEVWRQKXNF 24
+ + +TN + G+ NC K E+ R K + +N ARA +E R+K
Sbjct: 371 ELLKGVTNGKAGLQFENNCLVG-KLEELSFVSDRNKQ-DADN----ARAQLEEEREKHRL 424
Query: 23 LHENV 9
E +
Sbjct: 425 ATEKL 429
>Z80224-1|CAB02323.1| 1577|Caenorhabditis elegans Hypothetical protein
C34E11.3 protein.
Length = 1577
Score = 31.5 bits (68), Expect = 0.74
Identities = 28/109 (25%), Positives = 54/109 (49%), Gaps = 2/109 (1%)
Frame = -3
Query: 347 ENKLLFEIKHKAINYEDEDEIECFILAKRRKLHIDSLENLVLDDKDSTMVEE--NITNAE 174
E++ EI+ + +E E + +A ++ + D L L L+ K +T+VE+ ++ E
Sbjct: 724 EDRWTIEIEKQRQIFEKEIKTLGIRVADAKRQN-DELSEL-LESKSTTLVEKTRSLEEQE 781
Query: 173 DGISKYRNCTEAVKQLEMQLEEGRQKSIEFENMLQAARANVEVWRQKXN 27
+ K R TE +++ +LE ++ EFE + + E R+K N
Sbjct: 782 ERSKKLRAETELLRKDMQELETDKKTVKEFEIKYKKLESIFETEREKMN 830
>Z67755-10|CAA91761.1| 1577|Caenorhabditis elegans Hypothetical
protein C34E11.3 protein.
Length = 1577
Score = 31.5 bits (68), Expect = 0.74
Identities = 28/109 (25%), Positives = 54/109 (49%), Gaps = 2/109 (1%)
Frame = -3
Query: 347 ENKLLFEIKHKAINYEDEDEIECFILAKRRKLHIDSLENLVLDDKDSTMVEE--NITNAE 174
E++ EI+ + +E E + +A ++ + D L L L+ K +T+VE+ ++ E
Sbjct: 724 EDRWTIEIEKQRQIFEKEIKTLGIRVADAKRQN-DELSEL-LESKSTTLVEKTRSLEEQE 781
Query: 173 DGISKYRNCTEAVKQLEMQLEEGRQKSIEFENMLQAARANVEVWRQKXN 27
+ K R TE +++ +LE ++ EFE + + E R+K N
Sbjct: 782 ERSKKLRAETELLRKDMQELETDKKTVKEFEIKYKKLESIFETEREKMN 830
>Z67754-4|CAA91753.1| 1577|Caenorhabditis elegans Hypothetical protein
C34E11.3 protein.
Length = 1577
Score = 31.5 bits (68), Expect = 0.74
Identities = 28/109 (25%), Positives = 54/109 (49%), Gaps = 2/109 (1%)
Frame = -3
Query: 347 ENKLLFEIKHKAINYEDEDEIECFILAKRRKLHIDSLENLVLDDKDSTMVEE--NITNAE 174
E++ EI+ + +E E + +A ++ + D L L L+ K +T+VE+ ++ E
Sbjct: 724 EDRWTIEIEKQRQIFEKEIKTLGIRVADAKRQN-DELSEL-LESKSTTLVEKTRSLEEQE 781
Query: 173 DGISKYRNCTEAVKQLEMQLEEGRQKSIEFENMLQAARANVEVWRQKXN 27
+ K R TE +++ +LE ++ EFE + + E R+K N
Sbjct: 782 ERSKKLRAETELLRKDMQELETDKKTVKEFEIKYKKLESIFETEREKMN 830
>U41014-3|AAK32948.1| 519|Caenorhabditis elegans Hypothetical
protein C06G1.1 protein.
Length = 519
Score = 31.1 bits (67), Expect = 0.98
Identities = 21/75 (28%), Positives = 41/75 (54%), Gaps = 7/75 (9%)
Frame = -3
Query: 569 DEIVC-----KVITVLPNELTDLNMSCENFKKYFMNYNLIDMLNVIVYEKINSLKNFGNR 405
+++VC +++ VL N + + +S F++YF+NY L+ V + +LK+ GN
Sbjct: 197 EQVVCPSFHAELVPVLSNRIMNTPLSASLFEQYFINYALLG--PVEFSSQAITLKHRGNS 254
Query: 404 YAIYKP--SLLEEFR 366
+ I + + L +FR
Sbjct: 255 FGILRQGRTRLNDFR 269
>Z68006-3|CAA91997.2| 633|Caenorhabditis elegans Hypothetical
protein K09C8.4 protein.
Length = 633
Score = 30.7 bits (66), Expect = 1.3
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = +1
Query: 493 LKFSHDIFKSVSSLGRTVITLHTISSE 573
LKF DI K+V+ L RT IT+H + E
Sbjct: 388 LKFQLDIAKAVTELNRTDITIHLVFEE 414
>Z29094-7|CAA82342.2| 453|Caenorhabditis elegans Hypothetical
protein C07A9.8 protein.
Length = 453
Score = 30.3 bits (65), Expect = 1.7
Identities = 15/45 (33%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Frame = -3
Query: 566 EIVCKVITVLPNELTDLNMSCENFKKYFMNYN-LIDMLNVIVYEK 435
E V + +LP+EL N ++KY++++N +++LNV EK
Sbjct: 198 EAVAQAGIMLPHELEKFNSIKSRYQKYWVSFNWALELLNVAKTEK 242
>U50301-9|AAB37047.1| 305|Caenorhabditis elegans Hypothetical
protein F20D6.2 protein.
Length = 305
Score = 29.9 bits (64), Expect = 2.3
Identities = 14/59 (23%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Frame = -3
Query: 638 VDVENMQYQIRTYCKQIGWLENSDEIVCKVITVLPNELTDLNMSCENF-KKYFMNYNLI 465
+D+E+ +Y + + ++ G LE++ IVC++ + + + + + NF +K F+ + I
Sbjct: 194 IDIEHAEYPVFPFIEEKGQLEDNGIIVCQINIEIHSPIDEDRETFANFLRKNFVTHQWI 252
>AF078792-2|AAC26946.1| 512|Caenorhabditis elegans Hypothetical
protein Y40D12A.2 protein.
Length = 512
Score = 29.9 bits (64), Expect = 2.3
Identities = 16/56 (28%), Positives = 28/56 (50%)
Frame = -3
Query: 806 YPSFALEFKKYLDDNSPYPKPYEFISSSVKSDENNMVIKHLMSDLKLAEPTFMFNP 639
Y + L F YL+ N PYP P+E I K+ N + K ++ + + + + + P
Sbjct: 264 YDPYFLYFACYLNPNLPYP-PHEEIRKLQKNVLRNNLYKKIIGESPVLKNKYFYPP 318
>AF039713-10|AAB96721.1| 691|Caenorhabditis elegans Hypothetical
protein F57B10.4 protein.
Length = 691
Score = 29.9 bits (64), Expect = 2.3
Identities = 29/129 (22%), Positives = 60/129 (46%), Gaps = 4/129 (3%)
Frame = -3
Query: 482 MNYNLIDMLNVIVYEKINSLKNFGNRYAIYKPSLLEEFRTLNWLLENKLLFEI--KHKAI 309
+N NL + + EK++S+K+ +YK L EE + E+ L ++ + A+
Sbjct: 180 VNTNLESNIIQLSLEKLSSVKDSSTSENVYKAKLEEEINEARQIYEDALKQDVISQESAM 239
Query: 308 NYEDEDEIE--CFILAKRRKLHIDSLENLVLDDKDSTMVEENITNAEDGISKYRNCTEAV 135
+ + + C L+ K+++ S+E D + + + + E S+ N +E++
Sbjct: 240 MTQQLESLNELCSDLSDLNKINLTSIEKFP-DCNEVCELSDELQTLEK--SEAEN-SESI 295
Query: 134 KQLEMQLEE 108
LE LE+
Sbjct: 296 INLEASLED 304
>U58751-3|AAN84880.1| 667|Caenorhabditis elegans Pctaire class cell
cycle kinaseprotein 1, isoform c protein.
Length = 667
Score = 29.5 bits (63), Expect = 3.0
Identities = 16/46 (34%), Positives = 25/46 (54%)
Frame = -3
Query: 308 NYEDEDEIECFILAKRRKLHIDSLENLVLDDKDSTMVEENITNAED 171
++++E+E E + RR L D +E DD+D +VEE ED
Sbjct: 100 DFDEEEEDEFEDASDRRNLDEDDVEYEDEDDEDDIVVEEEEITPED 145
>U58751-2|AAL00852.1| 700|Caenorhabditis elegans Pctaire class cell
cycle kinaseprotein 1, isoform b protein.
Length = 700
Score = 29.5 bits (63), Expect = 3.0
Identities = 16/46 (34%), Positives = 25/46 (54%)
Frame = -3
Query: 308 NYEDEDEIECFILAKRRKLHIDSLENLVLDDKDSTMVEENITNAED 171
++++E+E E + RR L D +E DD+D +VEE ED
Sbjct: 133 DFDEEEEDEFEDASDRRNLDEDDVEYEDEDDEDDIVVEEEEITPED 178
>Z81587-2|CAB04702.2| 339|Caenorhabditis elegans Hypothetical
protein T06G6.2 protein.
Length = 339
Score = 28.7 bits (61), Expect = 5.2
Identities = 19/55 (34%), Positives = 28/55 (50%)
Frame = +3
Query: 546 YYFAHNFIGIFEPTNLFAVSSNLILHIFNIHRIEHKRWLC*FQIRH*MFYDHIVF 710
YYFA I N+F+ S+ LIL + ++ I H+ + +IR Y IVF
Sbjct: 43 YYFARLAIRTLWKNNIFSNSTRLILLVCLLNSIIHQTTMLEIRIR--QIYRSIVF 95
>U40802-11|AAK19013.1| 194|Caenorhabditis elegans Hypothetical
protein ZC477.7 protein.
Length = 194
Score = 28.7 bits (61), Expect = 5.2
Identities = 20/73 (27%), Positives = 32/73 (43%)
Frame = -3
Query: 257 KLHIDSLENLVLDDKDSTMVEENITNAEDGISKYRNCTEAVKQLEMQLEEGRQKSIEFEN 78
KLH DS+ NL D + N E+ ++K R + K+ E+ E R E N
Sbjct: 114 KLHADSIANLNRTRLDMDSAADKYANNENEVNKTR-LDNSTKEFEVAWERMR----ELAN 168
Query: 77 MLQAARANVEVWR 39
++ +N W+
Sbjct: 169 GIKTIESNHSSWQ 181
>X70833-1|CAA50181.1| 575|Caenorhabditis elegans Cytoplasmic
intermediate filament(IF) protein protein.
Length = 575
Score = 28.3 bits (60), Expect = 6.9
Identities = 17/79 (21%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Frame = -3
Query: 242 SLENLVLD-DKDSTMVEENITNAEDGISKYRNCTEAVKQLEMQLEEGRQKSIEFENMLQA 66
S ++L+ D DK+ +E+ I + ++ YRN + + E + R++ L A
Sbjct: 126 SAKDLIADSDKERAQLEDQIKKLVEELNNYRN---KLHEAERGADVTRKELDNVLGRLGA 182
Query: 65 ARANVEVWRQKXNFLHENV 9
A +E+ +++ + + E++
Sbjct: 183 LEAEIELLKRRISLMEESI 201
>U64858-3|AAN84865.1| 1250|Caenorhabditis elegans Roller: helically
twisted, animalsroll when moving protein 3, isoform b
protein.
Length = 1250
Score = 28.3 bits (60), Expect = 6.9
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = -3
Query: 785 FKKYLDDNSPYPKPYE 738
FKKYLDD + PKP++
Sbjct: 779 FKKYLDDTAGLPKPFK 794
>U64858-1|AAN84864.1| 2456|Caenorhabditis elegans Roller: helically
twisted, animalsroll when moving protein 3, isoform a
protein.
Length = 2456
Score = 28.3 bits (60), Expect = 6.9
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = -3
Query: 785 FKKYLDDNSPYPKPYE 738
FKKYLDD + PKP++
Sbjct: 779 FKKYLDDTAGLPKPFK 794
>U29379-3|AAF99979.3| 558|Caenorhabditis elegans Intermediate
filament, a protein 4 protein.
Length = 558
Score = 28.3 bits (60), Expect = 6.9
Identities = 17/79 (21%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Frame = -3
Query: 242 SLENLVLD-DKDSTMVEENITNAEDGISKYRNCTEAVKQLEMQLEEGRQKSIEFENMLQA 66
S ++L+ D DK+ +E+ I + ++ YRN + + E + R++ L A
Sbjct: 107 SAKDLIADSDKERAQLEDQIKKLVEELNNYRN---KLHEAERGADVTRKELDNVLGRLGA 163
Query: 65 ARANVEVWRQKXNFLHENV 9
A +E+ +++ + + E++
Sbjct: 164 LEAEIELLKRRISLMEESI 182
>Z75525-2|CAA99763.1| 1390|Caenorhabditis elegans Hypothetical
protein C03D6.4 protein.
Length = 1390
Score = 27.9 bits (59), Expect = 9.1
Identities = 16/71 (22%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Frame = -3
Query: 317 KAINYEDEDEIECFILAKRRKLHIDSLENLVLDDKDSTMVEENITNAEDGIS-KYRNCTE 141
K +++E ++++E + ++ L N+ + + M + A D ++ KY C++
Sbjct: 620 KEMDFEIDEKMELVAGVEDGNQVLEKLRNM--SETEKLMRFNKLETAADLLNGKYEECSD 677
Query: 140 AVKQLEMQLEE 108
+K+L M L E
Sbjct: 678 LIKKLRMSLSE 688
>Z70309-13|CAL36512.2| 383|Caenorhabditis elegans Hypothetical
protein R102.4c protein.
Length = 383
Score = 27.9 bits (59), Expect = 9.1
Identities = 19/83 (22%), Positives = 34/83 (40%)
Frame = -3
Query: 764 NSPYPKPYEFISSSVKSDENNMVIKHLMSDLKLAEPTFMFNPVDVENMQYQIRTYCKQIG 585
N P+ + + + D NMV+ H + + + + T F D+ M + R +
Sbjct: 302 NDATPEEFRTKVFAAEKDITNMVLVHCQNGVTVQQLTDFFQKHDILAMTFDARRIRMVLN 361
Query: 584 WLENSDEIVCKVITVLPNELTDL 516
W SDE + ++ V L L
Sbjct: 362 W-NVSDENLETIVEVYKKFLKQL 383
>Z70309-12|CAB54293.3| 413|Caenorhabditis elegans Hypothetical
protein R102.4b protein.
Length = 413
Score = 27.9 bits (59), Expect = 9.1
Identities = 19/83 (22%), Positives = 34/83 (40%)
Frame = -3
Query: 764 NSPYPKPYEFISSSVKSDENNMVIKHLMSDLKLAEPTFMFNPVDVENMQYQIRTYCKQIG 585
N P+ + + + D NMV+ H + + + + T F D+ M + R +
Sbjct: 332 NDATPEEFRTKVFAAEKDITNMVLVHCQNGVTVQQLTDFFQKHDILAMTFDARRIRMVLN 391
Query: 584 WLENSDEIVCKVITVLPNELTDL 516
W SDE + ++ V L L
Sbjct: 392 W-NVSDENLETIVEVYKKFLKQL 413
>Z70309-11|CAB54291.3| 408|Caenorhabditis elegans Hypothetical
protein R102.4a protein.
Length = 408
Score = 27.9 bits (59), Expect = 9.1
Identities = 19/83 (22%), Positives = 34/83 (40%)
Frame = -3
Query: 764 NSPYPKPYEFISSSVKSDENNMVIKHLMSDLKLAEPTFMFNPVDVENMQYQIRTYCKQIG 585
N P+ + + + D NMV+ H + + + + T F D+ M + R +
Sbjct: 327 NDATPEEFRTKVFAAEKDITNMVLVHCQNGVTVQQLTDFFQKHDILAMTFDARRIRMVLN 386
Query: 584 WLENSDEIVCKVITVLPNELTDL 516
W SDE + ++ V L L
Sbjct: 387 W-NVSDENLETIVEVYKKFLKQL 408
>L23645-9|AAK26134.1| 1226|Caenorhabditis elegans Hypothetical
protein F54F2.1 protein.
Length = 1226
Score = 27.9 bits (59), Expect = 9.1
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = -3
Query: 797 FALEFKKYLDDNSPYPKPYEFISSSVKSDEN 705
F L F LDD+SP P+ Y F+ VKSD +
Sbjct: 529 FDLRFN--LDDHSPEPRAY-FLQKDVKSDRS 556
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,730,842
Number of Sequences: 27780
Number of extensions: 335983
Number of successful extensions: 1138
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1062
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1136
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1998381620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -