Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P28_pT_A13
(635 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41105-4|AAA82397.2| 407|Caenorhabditis elegans 3-ketoacyl-coa ... 222 1e-58
U41105-5|AAA82398.1| 390|Caenorhabditis elegans Hypothetical pr... 171 4e-43
U41105-8|AAA82403.1| 460|Caenorhabditis elegans Hypothetical pr... 156 1e-38
Z81546-11|CAB04455.2| 394|Caenorhabditis elegans Hypothetical p... 140 6e-34
M77697-2|AAA27897.2| 448|Caenorhabditis elegans Hypothetical pr... 97 9e-21
D86473-1|BAA20377.1| 412|Caenorhabditis elegans 3-keto-acyl-CoA... 33 0.23
AL023847-7|CAA19548.1| 412|Caenorhabditis elegans Hypothetical ... 33 0.23
Z82269-7|CAB05204.2| 786|Caenorhabditis elegans Hypothetical pr... 30 1.2
Z82269-6|CAB05206.3| 809|Caenorhabditis elegans Hypothetical pr... 30 1.2
DQ143943-1|AAZ73241.1| 770|Caenorhabditis elegans RNA-decapping... 30 1.2
AL021488-8|CAJ43919.1| 786|Caenorhabditis elegans Hypothetical ... 30 1.2
AL021488-7|CAJ43918.1| 809|Caenorhabditis elegans Hypothetical ... 30 1.2
AC006683-1|AAK71395.4| 954|Caenorhabditis elegans Adenylyl cycl... 30 1.6
Z71180-3|CAA94892.2| 763|Caenorhabditis elegans Hypothetical pr... 28 4.9
AL021474-7|CAA16311.2| 763|Caenorhabditis elegans Hypothetical ... 28 4.9
AL021386-3|CAA16167.1| 330|Caenorhabditis elegans Hypothetical ... 28 4.9
Z74028-4|CAC70073.1| 143|Caenorhabditis elegans Hypothetical pr... 27 8.5
>U41105-4|AAA82397.2| 407|Caenorhabditis elegans 3-ketoacyl-coa
thiolase protein 1 protein.
Length = 407
Score = 222 bits (543), Expect = 1e-58
Identities = 103/193 (53%), Positives = 138/193 (71%)
Frame = -2
Query: 634 LVPVPVPQXRGAPVIFAEDEEYXRVNFXKFTKLSTVFQKENGTVTAGNASTLNDGXXXXX 455
+VPV V +G ++ +DEE+ +VNF KFT L TVFQK+ GT+TA NASTLNDG
Sbjct: 217 VVPVNVKSKKGVTIV-DKDEEFTKVNFDKFTSLRTVFQKD-GTITAANASTLNDGAAAVI 274
Query: 454 XXXXXXAKRLNVKPIARIVGFADGECDPIDFPIAPAVAIPKLLEKTGVRKEDVALWEINE 275
++KP+ARI+ + D P+DF +AP + PK+LE+ GV++ DVA WE+NE
Sbjct: 275 VASQEAVSEQSLKPLARILAYGDAATHPLDFAVAPTLMFPKILERAGVKQSDVAQWEVNE 334
Query: 274 AFSVVAVANQKLLGLDPSKINVHGGAVSLGHPIGMSGARIVVHLCHALKKGEKGVASICN 95
AFS V +A K LG+DPS +N HGGAVS+GHPIGMSGAR++ HL H LK G+ GVA+ICN
Sbjct: 335 AFSCVPLAFIKKLGVDPSLVNPHGGAVSIGHPIGMSGARLITHLVHTLKSGQIGVAAICN 394
Query: 94 GGGGASSVMIEKM 56
GGGG+S ++I+K+
Sbjct: 395 GGGGSSGMVIQKL 407
>U41105-5|AAA82398.1| 390|Caenorhabditis elegans Hypothetical
protein T02G5.7 protein.
Length = 390
Score = 171 bits (416), Expect = 4e-43
Identities = 88/194 (45%), Positives = 127/194 (65%), Gaps = 1/194 (0%)
Frame = -2
Query: 634 LVPVPVPQXRGAPVIFAEDEEYXRVNFXKFTKLSTVFQKEN-GTVTAGNASTLNDGXXXX 458
+VPV V R + V+ EDEEY ++ K + L VF ++ GT+T NAS+LNDG
Sbjct: 199 VVPVSVKTSR-SEVVITEDEEYKKLIESKVSSLKPVFVRDGTGTITPANASSLNDGAVAT 257
Query: 457 XXXXXXXAKRLNVKPIARIVGFADGECDPIDFPIAPAVAIPKLLEKTGVRKEDVALWEIN 278
+ P+A +V FA+ PIDF +AP A+ LL+K+G++ D+ALWE+N
Sbjct: 258 VVVGENALPQ-GAHPLAELVAFAEAGRAPIDFTVAPVDAVRLLLKKSGLQVSDIALWELN 316
Query: 277 EAFSVVAVANQKLLGLDPSKINVHGGAVSLGHPIGMSGARIVVHLCHALKKGEKGVASIC 98
EAF+V +A K L ++PS +NV GGAV++GHP+GMSG RIV L ++L G+ GVA+IC
Sbjct: 317 EAFAVTVLAFIKELNIEPSVVNVKGGAVAIGHPLGMSGLRIVNSLAYSLAPGQLGVAAIC 376
Query: 97 NGGGGASSVMIEKM 56
NGGG A++V+I+K+
Sbjct: 377 NGGGEATAVLIKKL 390
>U41105-8|AAA82403.1| 460|Caenorhabditis elegans Hypothetical
protein T02G5.4 protein.
Length = 460
Score = 156 bits (379), Expect = 1e-38
Identities = 69/152 (45%), Positives = 99/152 (65%)
Frame = -2
Query: 511 GTVTAGNASTLNDGXXXXXXXXXXXAKRLNVKPIARIVGFADGECDPIDFPIAPAVAIPK 332
GT++ + + DG N+KP+ARI+ + D +DF +AP + P
Sbjct: 309 GTISDKHIAAFTDGAAAVILASQEAVSEQNLKPLARILAYGDAATHQLDFAVAPTLLFPN 368
Query: 331 LLEKTGVRKEDVALWEINEAFSVVAVANQKLLGLDPSKINVHGGAVSLGHPIGMSGARIV 152
LL+ GV + DVA WE+NEAFS V +A K LG+DPS +N HGGAVS+GHPIGMSGA ++
Sbjct: 369 LLQSAGVEQSDVAQWEVNEAFSCVPLAFIKKLGVDPSLVNPHGGAVSIGHPIGMSGASLI 428
Query: 151 VHLCHALKKGEKGVASICNGGGGASSVMIEKM 56
HL H L+ G+ GVA++C+G GG+S ++I+K+
Sbjct: 429 THLVHTLESGQIGVAALCDGDGGSSGMVIQKL 460
>Z81546-11|CAB04455.2| 394|Caenorhabditis elegans Hypothetical
protein F53A2.7 protein.
Length = 394
Score = 140 bits (340), Expect = 6e-34
Identities = 73/180 (40%), Positives = 108/180 (60%), Gaps = 2/180 (1%)
Frame = -2
Query: 589 FAEDEEYXRVNFXKFTKLSTVFQKENGTVTAGNASTLNDGXXXXXXXXXXXAKRLNVKPI 410
F DE KL VFQK+ G V AGNAS ++DG K N+KP+
Sbjct: 216 FEIDEHPRATTAESLAKLKPVFQKD-GLVNAGNASGISDGAAALVVAGEDSVKSKNLKPL 274
Query: 409 ARIVGFADGECDPIDFPIAPAVAIPKLLEKTGVRKEDVALWEINEAFSVVAVANQKLLGL 230
AR+V ++ CDP I PA AI ++L+K+G++ D+ ++E+NEAF+ A+A Q+ LG+
Sbjct: 275 ARVVAYSAVGCDPTIMGIGPAPAIREVLKKSGLKIGDIDIFEVNEAFAPQALAVQRELGI 334
Query: 229 DPSKINVHGGAVSLGHPIGMSGARIVVHLCHAL--KKGEKGVASICNGGGGASSVMIEKM 56
K+NV+GGA++LGHP+ SGARI H+ H L + + G+ S C GGG +++ EK+
Sbjct: 335 PMEKLNVNGGAIALGHPLAASGARISTHIVHELHRRNVKYGIGSACIGGGQGIAILFEKV 394
>M77697-2|AAA27897.2| 448|Caenorhabditis elegans Hypothetical
protein B0303.3 protein.
Length = 448
Score = 97.1 bits (231), Expect = 9e-21
Identities = 70/208 (33%), Positives = 96/208 (46%), Gaps = 20/208 (9%)
Frame = -2
Query: 625 VPVPQXRGAPVIFAEDEEYXRVNFXKFTKLSTVFQKENGTVTAGNASTLNDGXXXXXXXX 446
VPV P ED K + L F K +GTVTA NAS L DG
Sbjct: 237 VPVFLDGKKPKTIKEDNGIRVSTLEKLSSLKPAFVKPHGTVTAANASYLTDGASAALIMT 296
Query: 445 XXXAKRLNVKPIARIVGFADGECDPID-FPIAPAVAIPKLLEKTGVRKEDVALWEINEAF 269
A KP A + + DP D ++PA IPKLL+K G+ +DV ++EI+EAF
Sbjct: 297 EEYALANGYKPKAYLRDYLYVAQDPKDQLLLSPAYVIPKLLDKAGLTLKDVDVFEIHEAF 356
Query: 268 SVVAVANQKLLGLD-----------------PSKINVHGGAVSLGHPIGMSGARIVVHLC 140
+ +AN + D K+N+ GG++S+GHP G +G R+ H
Sbjct: 357 AGQVLANLNAMDSDYFCKEQMKRSGKFGRVPMDKLNLWGGSLSIGHPFGATGVRLATHSA 416
Query: 139 HALK--KGEKGVASICNGGGGASSVMIE 62
H LK KG+ V + C GG ++IE
Sbjct: 417 HRLKEEKGQYAVIAACAAGGHGVGMLIE 444
>D86473-1|BAA20377.1| 412|Caenorhabditis elegans 3-keto-acyl-CoA
thiolase protein.
Length = 412
Score = 32.7 bits (71), Expect = 0.23
Identities = 17/41 (41%), Positives = 23/41 (56%)
Frame = -2
Query: 217 INVHGGAVSLGHPIGMSGARIVVHLCHALKKGEKGVASICN 95
IN GG +S GHPIG +G V L + L +G+ G + N
Sbjct: 341 INPSGGLISKGHPIGATGVAQAVELSNQL-RGKCGKRQVPN 380
>AL023847-7|CAA19548.1| 412|Caenorhabditis elegans Hypothetical
protein Y57A10C.6 protein.
Length = 412
Score = 32.7 bits (71), Expect = 0.23
Identities = 17/41 (41%), Positives = 23/41 (56%)
Frame = -2
Query: 217 INVHGGAVSLGHPIGMSGARIVVHLCHALKKGEKGVASICN 95
IN GG +S GHPIG +G V L + L +G+ G + N
Sbjct: 341 INPSGGLISKGHPIGATGVAQAVELSNQL-RGKCGKRQVPN 380
>Z82269-7|CAB05204.2| 786|Caenorhabditis elegans Hypothetical
protein F52G2.1b protein.
Length = 786
Score = 30.3 bits (65), Expect = 1.2
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +3
Query: 48 STYIFSIITDDAPPPPLQIEATPFSPFFK 134
S+ IFS + PPPP+ +ATP P +K
Sbjct: 400 SSSIFSQLFPAQPPPPVPEDATPTRPMYK 428
>Z82269-6|CAB05206.3| 809|Caenorhabditis elegans Hypothetical
protein F52G2.1a protein.
Length = 809
Score = 30.3 bits (65), Expect = 1.2
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +3
Query: 48 STYIFSIITDDAPPPPLQIEATPFSPFFK 134
S+ IFS + PPPP+ +ATP P +K
Sbjct: 423 SSSIFSQLFPAQPPPPVPEDATPTRPMYK 451
>DQ143943-1|AAZ73241.1| 770|Caenorhabditis elegans RNA-decapping
protein protein.
Length = 770
Score = 30.3 bits (65), Expect = 1.2
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +3
Query: 48 STYIFSIITDDAPPPPLQIEATPFSPFFK 134
S+ IFS + PPPP+ +ATP P +K
Sbjct: 384 SSSIFSQLFPAQPPPPVPEDATPTRPMYK 412
>AL021488-8|CAJ43919.1| 786|Caenorhabditis elegans Hypothetical
protein F52G2.1b protein.
Length = 786
Score = 30.3 bits (65), Expect = 1.2
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +3
Query: 48 STYIFSIITDDAPPPPLQIEATPFSPFFK 134
S+ IFS + PPPP+ +ATP P +K
Sbjct: 400 SSSIFSQLFPAQPPPPVPEDATPTRPMYK 428
>AL021488-7|CAJ43918.1| 809|Caenorhabditis elegans Hypothetical
protein F52G2.1a protein.
Length = 809
Score = 30.3 bits (65), Expect = 1.2
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +3
Query: 48 STYIFSIITDDAPPPPLQIEATPFSPFFK 134
S+ IFS + PPPP+ +ATP P +K
Sbjct: 423 SSSIFSQLFPAQPPPPVPEDATPTRPMYK 451
>AC006683-1|AAK71395.4| 954|Caenorhabditis elegans Adenylyl cyclase
protein 4 protein.
Length = 954
Score = 29.9 bits (64), Expect = 1.6
Identities = 18/61 (29%), Positives = 29/61 (47%)
Frame = -2
Query: 241 LLGLDPSKINVHGGAVSLGHPIGMSGARIVVHLCHALKKGEKGVASICNGGGGASSVMIE 62
+LGL + +V V+L + + G VH+ A + KG + G GG+ S +E
Sbjct: 348 VLGLKKWQFDVWSNDVTLANQMESGGLAGRVHITDATRSYLKGAYILEEGNGGSRSKFLE 407
Query: 61 K 59
K
Sbjct: 408 K 408
>Z71180-3|CAA94892.2| 763|Caenorhabditis elegans Hypothetical
protein F22E12.1 protein.
Length = 763
Score = 28.3 bits (60), Expect = 4.9
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -1
Query: 212 CTWWSCQFGSSNWYVWSSHC 153
C+WWS G+SN Y +HC
Sbjct: 114 CSWWSGCGGNSNIYYSYNHC 133
>AL021474-7|CAA16311.2| 763|Caenorhabditis elegans Hypothetical
protein F22E12.1 protein.
Length = 763
Score = 28.3 bits (60), Expect = 4.9
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -1
Query: 212 CTWWSCQFGSSNWYVWSSHC 153
C+WWS G+SN Y +HC
Sbjct: 114 CSWWSGCGGNSNIYYSYNHC 133
>AL021386-3|CAA16167.1| 330|Caenorhabditis elegans Hypothetical
protein F57E7.3 protein.
Length = 330
Score = 28.3 bits (60), Expect = 4.9
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -1
Query: 212 CTWWSCQFGSSNWYVWSSHCCTSV 141
CTW F S+ WY+ +SH + +
Sbjct: 2 CTWRGSYFESAEWYLLASHLLSCI 25
>Z74028-4|CAC70073.1| 143|Caenorhabditis elegans Hypothetical
protein C14C10.7 protein.
Length = 143
Score = 27.5 bits (58), Expect = 8.5
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = +3
Query: 105 EATPFSPFFKAWHRCTTMRAP 167
E TP P FK +H C R P
Sbjct: 78 ETTPIDPVFKIYHDCNDERLP 98
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,911,178
Number of Sequences: 27780
Number of extensions: 288351
Number of successful extensions: 864
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 837
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 859
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1406256614
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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