Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P28_pT_A07
(846 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_06_0265 - 26759960-26760088,26760315-26760386,26760457-267605... 118 6e-27
01_06_0411 + 29151647-29151790,29152974-29153039,29153398-291535... 116 2e-26
04_04_1432 - 33558895-33559023,33559215-33559286,33559405-335594... 106 3e-23
04_04_1431 - 33551127-33551300,33551362-33551433,33551508-335515... 87 2e-17
01_06_0363 - 28745581-28745709,28746043-28746114,28746373-287464... 83 2e-16
09_04_0692 + 19502878-19502920,19505011-19505104,19505196-195052... 30 2.0
07_03_1039 - 23454130-23454552,23454859-23455536 29 4.7
08_02_0370 - 16333471-16333526,16333821-16333912,16334553-163346... 28 8.1
>05_06_0265 -
26759960-26760088,26760315-26760386,26760457-26760546,
26760649-26760693,26760785-26760880,26760980-26761031,
26761209-26761297,26761388-26761504,26761680-26761737,
26761834-26761936,26762027-26762051,26762677-26762826
Length = 341
Score = 118 bits (284), Expect = 6e-27
Identities = 53/128 (41%), Positives = 80/128 (62%)
Frame = -1
Query: 435 YKSAQDICLEIGTMFQIQDDFIDCFGDEIKTGKVGTDIQERKCTWLAVQALQRCTEAQRT 256
Y + +DI +++G FQ+QDD++DC+GD GK+GTDI++ KC+WL VQAL+R E+Q++
Sbjct: 213 YGAVEDILVKMGIYFQVQDDYLDCYGDPKFIGKIGTDIEDYKCSWLVVQALERADESQKS 272
Query: 255 VFKACYGSSEPAHVERIKRLYEDLHLPQIYKHQEKAMYDNIIRQIENIPIEAARVLFKKL 76
V YG +PA V ++K LY +L+L ++ E Y +I IE P A + + K
Sbjct: 273 VLFENYGKKDPACVAKVKSLYRELNLEAVFLDYENESYKKLIADIEAQPSIAVQNVLKSF 332
Query: 75 LDITYNRQ 52
L Y RQ
Sbjct: 333 LHKIYKRQ 340
Score = 41.1 bits (92), Expect = 0.001
Identities = 23/90 (25%), Positives = 44/90 (48%), Gaps = 1/90 (1%)
Frame = -3
Query: 724 AFNDSLLIHSSLFEFXKTNFRTNPNYIKMFELFNETLWRTSMGQHLDHVTGNR-KTDYSS 548
A ND +++ + + + +FR Y + +LFNE ++T+ GQ LD +T + + D +
Sbjct: 117 AINDGIILRNHITRMLRLHFRGKLYYADLLDLFNEVEFKTASGQLLDLITTHEGEKDLNK 176
Query: 547 FTLDRXXXXXXXXXXXXXYNLPVSLGLLLA 458
+ + + LPV+ LLL+
Sbjct: 177 YNIGVHRRIVQYKTSYYSFYLPVACALLLS 206
>01_06_0411 +
29151647-29151790,29152974-29153039,29153398-29153538,
29153638-29153724,29153968-29154084,29154177-29154265,
29154510-29154561,29154667-29154762,29154835-29154879,
29155002-29155091,29155164-29155235,29155490-29155618
Length = 375
Score = 116 bits (279), Expect = 2e-26
Identities = 51/128 (39%), Positives = 81/128 (63%)
Frame = -1
Query: 435 YKSAQDICLEIGTMFQIQDDFIDCFGDEIKTGKVGTDIQERKCTWLAVQALQRCTEAQRT 256
+ ++I +E+GT FQ+QDD++DC+GD GK+GTDI++ KC+WL VQAL+R E Q+
Sbjct: 247 FGDVKNILVEMGTYFQVQDDYLDCYGDPEFIGKIGTDIEDYKCSWLVVQALERADENQKH 306
Query: 255 VFKACYGSSEPAHVERIKRLYEDLHLPQIYKHQEKAMYDNIIRQIENIPIEAARVLFKKL 76
+ YG +P V ++K LY++L+L ++ E+ Y+ +I IE P +A + + K
Sbjct: 307 ILFENYGKPDPECVAKVKDLYKELNLEAVFHEYERESYNKLIADIEAHPNKAVQNVLKSF 366
Query: 75 LDITYNRQ 52
L Y RQ
Sbjct: 367 LHKIYKRQ 374
Score = 98.3 bits (234), Expect = 7e-21
Identities = 49/135 (36%), Positives = 77/135 (57%), Gaps = 2/135 (1%)
Frame = -3
Query: 844 GWCVEMFQAYCIVXDDIMDGSSVXRGMPCWYRRPEVGITCAFNDSLLIHSSLFEFXKTNF 665
GWC+E QAY +V DDIMD S RG PCW+R P+VG+ A ND +++ + + + +F
Sbjct: 112 GWCIEWLQAYFLVLDDIMDNSQTRRGQPCWFRVPQVGL-IAVNDGIILRNHISRILQRHF 170
Query: 664 RTNPNYIKMFELFNETLWRTSMGQHLDHVTGNR-KTDYSSFTLDRXXXXXXXXXXXXXYN 488
+ Y+ + +LFNE ++T+ GQ LD +T + + D + + L +
Sbjct: 171 KGKLYYVDLIDLFNEVEFKTASGQLLDLITTHEGEKDLTKYNLTVHRRIVQYKTAYYSFY 230
Query: 487 LPVSLGLLLA-ENVD 446
LPV+ LLL+ EN+D
Sbjct: 231 LPVACALLLSGENLD 245
>04_04_1432 -
33558895-33559023,33559215-33559286,33559405-33559494,
33559574-33559618,33559693-33559788,33559905-33559956,
33560044-33560132,33560226-33560342,33560448-33560534,
33560646-33560761,33560854-33560878,33561816-33562121
Length = 407
Score = 106 bits (254), Expect = 3e-23
Identities = 48/128 (37%), Positives = 74/128 (57%)
Frame = -1
Query: 435 YKSAQDICLEIGTMFQIQDDFIDCFGDEIKTGKVGTDIQERKCTWLAVQALQRCTEAQRT 256
Y +++ +E+G FQIQDD++DCFGD GKVGTDI++ KC+WL VQA++ E +
Sbjct: 279 YVELKNVLIEMGVYFQIQDDYLDCFGDPEVIGKVGTDIEDYKCSWLIVQAMELANENEMK 338
Query: 255 VFKACYGSSEPAHVERIKRLYEDLHLPQIYKHQEKAMYDNIIRQIENIPIEAARVLFKKL 76
+ YG S+P V +K +Y +L L I+ E +Y +++ I+ A R + K
Sbjct: 339 ILYENYGKSDPKCVAEVKSVYRELDLQDIFLEYESRVYKHLVSTIDAETDRAIRDILKSF 398
Query: 75 LDITYNRQ 52
L Y R+
Sbjct: 399 LKKIYRRK 406
Score = 74.9 bits (176), Expect = 7e-14
Identities = 43/129 (33%), Positives = 65/129 (50%), Gaps = 1/129 (0%)
Frame = -3
Query: 844 GWCVEMFQAYCIVXDDIMDGSSVXRGMPCWYRRPEVGITCAFNDSLLIHSSLFEFXKTNF 665
GWCVE QA +V DDI D + R CWY+ P VG++ A ND +L+ + K F
Sbjct: 144 GWCVEWLQASALVLDDITDNAYTRRDNLCWYKLPTVGMS-AINDGVLLKCHVQAIIKRYF 202
Query: 664 RTNPNYIKMFELFNETLWRTSMGQHLDHVTGNR-KTDYSSFTLDRXXXXXXXXXXXXXYN 488
+ ++ + EL+NE +T+MGQ LD +T + D + + + +
Sbjct: 203 KEKFYFLDLMELWNEIGLQTAMGQMLDLITTHTGAKDLARYRIQGYRRIVKYKTSYYSFY 262
Query: 487 LPVSLGLLL 461
LPV+ LLL
Sbjct: 263 LPVACALLL 271
>04_04_1431 -
33551127-33551300,33551362-33551433,33551508-33551597,
33551671-33551715,33551785-33551880,33552245-33552296,
33552412-33552500,33552590-33552887,33553007-33553109,
33553328-33553352,33553503-33553763
Length = 434
Score = 87.0 bits (206), Expect = 2e-17
Identities = 50/143 (34%), Positives = 72/143 (50%), Gaps = 15/143 (10%)
Frame = -1
Query: 435 YKSAQDICLEIGTMFQIQDDFIDCFGDEIKTGKVGTDIQERKCTWLAVQALQRCTEAQRT 256
+ +DI +E+G FQIQDD++DCF D GK+GTDI++ KC+WL VQAL Q
Sbjct: 291 FSGLKDILIEMGIYFQIQDDYLDCFADPNTIGKIGTDIEDHKCSWLIVQALGHADNNQIE 350
Query: 255 VFKACYGSSEPAHVERIKRLYEDLHL--------------PQ-IYKHQEKAMYDNIIRQI 121
V YG + + V +KR Y L L PQ I+ E+ Y++++ I
Sbjct: 351 VLHRNYGKKDSSSVSEVKRTYAALDLKIWAIDLADCEFCPPQDIFSEFERRCYNHLVTSI 410
Query: 120 ENIPIEAARVLFKKLLDITYNRQ 52
E AAR + L + R+
Sbjct: 411 EAQKDHAAREILISFLKKIHQRK 433
Score = 39.5 bits (88), Expect = 0.003
Identities = 24/96 (25%), Positives = 47/96 (48%), Gaps = 1/96 (1%)
Frame = -3
Query: 742 EVGITCAFNDSLLIHSSLFEFXKTNFRTNPNYIKMFELFNETLWRTSMGQHLDHV-TGNR 566
+VG+ ND +++ + K FR P ++ + E+++E +TS+GQ LD + T
Sbjct: 190 QVGLR-GINDGIILKCHILIMIKKYFREKPYFLDILEIWSEIALQTSLGQMLDLISTHTG 248
Query: 565 KTDYSSFTLDRXXXXXXXXXXXXXYNLPVSLGLLLA 458
D + ++++ + LPV+ LLL+
Sbjct: 249 ADDLAKYSIEGYRRIVKYKTAYYSFYLPVANALLLS 284
>01_06_0363 -
28745581-28745709,28746043-28746114,28746373-28746417,
28746523-28746618,28747029-28747080,28747232-28747305,
28747386-28747502,28747844-28747930,28748186-28748281,
28748508-28748654
Length = 304
Score = 83.4 bits (197), Expect = 2e-16
Identities = 40/92 (43%), Positives = 54/92 (58%)
Frame = -3
Query: 844 GWCVEMFQAYCIVXDDIMDGSSVXRGMPCWYRRPEVGITCAFNDSLLIHSSLFEFXKTNF 665
GW QAY +V DDIMD S RG PCW+R P+VG+ A ND L++ S + + F
Sbjct: 79 GW---QLQAYFLVLDDIMDNSQTRRGKPCWFRLPKVGL-IAINDGLVLRSQISRIFRRYF 134
Query: 664 RTNPNYIKMFELFNETLWRTSMGQHLDHVTGN 569
R Y+ + +LFNE +T+ GQ LD +T N
Sbjct: 135 RGKSYYVDLLDLFNEVEIQTTSGQLLDQITTN 166
Score = 57.2 bits (132), Expect = 2e-08
Identities = 27/74 (36%), Positives = 39/74 (52%)
Frame = -1
Query: 276 CTEAQRTVFKACYGSSEPAHVERIKRLYEDLHLPQIYKHQEKAMYDNIIRQIENIPIEAA 97
C + K YG S+PA V ++K LY +LHL +++ E+ Y+ +I IE P EA
Sbjct: 229 CFGEPEIIGKENYGKSDPACVAKVKDLYNELHLQRVFSEYERESYEKLISAIEAQPNEAV 288
Query: 96 RVLFKKLLDITYNR 55
R + K L Y R
Sbjct: 289 RAVLKSFLHKIYKR 302
Score = 37.9 bits (84), Expect = 0.010
Identities = 15/33 (45%), Positives = 21/33 (63%)
Frame = -1
Query: 435 YKSAQDICLEIGTMFQIQDDFIDCFGDEIKTGK 337
Y + I +E+G FQ QDD++DCFG+ GK
Sbjct: 206 YAQVKHILVEMGVYFQSQDDYLDCFGEPEIIGK 238
>09_04_0692 +
19502878-19502920,19505011-19505104,19505196-19505227,
19505833-19506074,19506758-19506994,19508283-19508396
Length = 253
Score = 30.3 bits (65), Expect = 2.0
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +1
Query: 82 FKENAGGLYWYIFNLSYNIVVH 147
F++ GG+YWY F YN+V+H
Sbjct: 231 FRDFTGGMYWYAF--IYNVVLH 250
>07_03_1039 - 23454130-23454552,23454859-23455536
Length = 366
Score = 29.1 bits (62), Expect = 4.7
Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = -1
Query: 405 IGTMFQIQDDFIDCFGDEIKTGK-VGTDIQERKCTWLAVQALQRCTE 268
IG +FQ+ DD +D + GK G D+ K T+ + L++ E
Sbjct: 284 IGLLFQVVDDILDVTKSSEELGKTAGKDLASDKTTYPKLLGLEKSRE 330
>08_02_0370 -
16333471-16333526,16333821-16333912,16334553-16334671,
16335152-16335226,16335328-16335393,16335507-16335563,
16335640-16335689,16335774-16335944,16337057-16337183,
16337658-16338017
Length = 390
Score = 28.3 bits (60), Expect = 8.1
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = -1
Query: 399 TMFQIQDDFIDCFGDEIKTGKVGTDIQERKCTWLAVQALQRCTEA 265
T++Q+ + ID G E+K ++ IQE C L + + TE+
Sbjct: 240 TIYQVVKEMIDKMGYEVKLVRINKRIQEAYCAELFLTKVGDHTES 284
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,090,963
Number of Sequences: 37544
Number of extensions: 436339
Number of successful extensions: 890
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 864
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 886
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2350456800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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