Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_pT_A04
         (687 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY569694-1|AAS86647.1|  400|Apis mellifera complementary sex det...    27   0.22 
AY540846-1|AAS48080.1|  541|Apis mellifera neuronal nicotinic ac...    26   0.29 
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    23   2.1  
AY526235-1|AAS20468.1|  169|Apis mellifera esterase protein.           23   2.1  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           23   2.1  
Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein RJP...    23   2.7  
AY736135-1|AAU84701.1|  253|Apis mellifera take-out-like carrier...    23   2.7  
AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly pro...    23   3.6  
EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase protein.    22   6.3  
AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.    22   6.3  

>AY569694-1|AAS86647.1|  400|Apis mellifera complementary sex
           determiner protein.
          Length = 400

 Score = 26.6 bits (56), Expect = 0.22
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = +3

Query: 180 SRKNKTIMDIKRYNGYKNKILFF 248
           S  NKTI +   YN Y NK L++
Sbjct: 306 SLSNKTIHNNNNYNNYNNKKLYY 328


>AY540846-1|AAS48080.1|  541|Apis mellifera neuronal nicotinic
           acetylcholine receptorApisa2 subunit protein.
          Length = 541

 Score = 26.2 bits (55), Expect = 0.29
 Identities = 13/35 (37%), Positives = 18/35 (51%)
 Frame = -3

Query: 640 FNGKKNDENIVTQTLNSVFI*IFWFASFYLVFLIL 536
           FN +  D   V   L+ +F+ IF  AS    F+IL
Sbjct: 471 FNAEDQDWGFVAMVLDRLFLWIFTIASIVGTFIIL 505


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -2

Query: 242 KYLIFISIVSLYIHYRFIFAGFLKT 168
           KYL+   ++ + I+YR    GFL T
Sbjct: 144 KYLMDSDVIFVTINYRLGILGFLST 168


>AY526235-1|AAS20468.1|  169|Apis mellifera esterase protein.
          Length = 169

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -2

Query: 242 KYLIFISIVSLYIHYRFIFAGFLKT 168
           KYL+   ++ + I+YR    GFL T
Sbjct: 15  KYLMDSDVIFVTINYRLGILGFLST 39


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -2

Query: 242 KYLIFISIVSLYIHYRFIFAGFLKT 168
           KYL+   ++ + I+YR    GFL T
Sbjct: 144 KYLMDSDVIFVTINYRLGILGFLST 168


>Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein
           RJP57-1 protein.
          Length = 544

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = -3

Query: 280 LNTKSYNRRFSKKSILFL 227
           LNT+S+ +  SK  +LFL
Sbjct: 305 LNTQSFGKVVSKNGVLFL 322


>AY736135-1|AAU84701.1|  253|Apis mellifera take-out-like carrier
           protein JHBP-1 protein.
          Length = 253

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 14/35 (40%), Positives = 18/35 (51%)
 Frame = +1

Query: 91  LKTLHSIYLQKIT*N*YDYKLIVVTKVLRNPAKIK 195
           LK+ + IY +K   N   Y  I    V  NPAK+K
Sbjct: 155 LKSHNDIYCEKYEKNGETYLRIKKHAVKFNPAKVK 189


>AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly
           protein MRJP2 protein.
          Length = 452

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = +3

Query: 105 FDLLTKNHLKLIRL 146
           FDL T NHLK I +
Sbjct: 158 FDLKTSNHLKQIEI 171


>EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase protein.
          Length = 200

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = -1

Query: 351 IYAPDIYATVLW*DLF 304
           IYAPD  A  L+ DLF
Sbjct: 50  IYAPDAEAYTLFADLF 65


>AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.
          Length = 355

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = -1

Query: 351 IYAPDIYATVLW*DLF 304
           IYAPD  A  L+ DLF
Sbjct: 66  IYAPDAEAYTLFADLF 81


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 177,038
Number of Sequences: 438
Number of extensions: 3454
Number of successful extensions: 14
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20952180
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)