Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_F_P24
         (868 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071386-1|AAL49008.1|  148|Drosophila melanogaster RE42475p pro...   179   5e-45
AE014135-29|AAN06514.1|  148|Drosophila melanogaster CG31997-PA ...   179   5e-45
AE014298-1544|AAF47993.1|  160|Drosophila melanogaster CG2081-PB...    32   0.89 
AE014298-1565|AAF48006.1|  115|Drosophila melanogaster CG15202-P...    30   4.7  
M17119-1|AAA28313.1|  345|Drosophila melanogaster protein ( D.me...    29   8.3  
BT022151-1|AAY51546.1|  345|Drosophila melanogaster IP01419p pro...    29   8.3  
AL024453-1|CAA19657.1|  345|Drosophila melanogaster EG:198A6.1,F...    29   8.3  
AE014298-28|AAF45499.1|  345|Drosophila melanogaster CG3827-PA p...    29   8.3  

>AY071386-1|AAL49008.1|  148|Drosophila melanogaster RE42475p
           protein.
          Length = 148

 Score =  179 bits (435), Expect = 5e-45
 Identities = 75/99 (75%), Positives = 85/99 (85%)
 Frame = +1

Query: 184 KTFRRLIPADVLRDFPGMCFASTRCITVEPGNTWELSPFCGRSTCVVSEDQPPRLLELVE 363
           + F+RLIPADVLRDFPGMCFASTRC TVEPG +W+L+PFCGRSTCV +E+   +L ELVE
Sbjct: 34  RIFKRLIPADVLRDFPGMCFASTRCATVEPGKSWDLTPFCGRSTCVQNEENDAKLFELVE 93

Query: 364 DCGPLPLTNPKCQLDTEKTNKTAPFPGCCPIFTCEEGAK 480
           DCGPLPL N KC+LDTEKTNKTA FP CCPIFTC+ G K
Sbjct: 94  DCGPLPLANDKCKLDTEKTNKTASFPYCCPIFTCDPGVK 132


>AE014135-29|AAN06514.1|  148|Drosophila melanogaster CG31997-PA
           protein.
          Length = 148

 Score =  179 bits (435), Expect = 5e-45
 Identities = 75/99 (75%), Positives = 85/99 (85%)
 Frame = +1

Query: 184 KTFRRLIPADVLRDFPGMCFASTRCITVEPGNTWELSPFCGRSTCVVSEDQPPRLLELVE 363
           + F+RLIPADVLRDFPGMCFASTRC TVEPG +W+L+PFCGRSTCV +E+   +L ELVE
Sbjct: 34  RIFKRLIPADVLRDFPGMCFASTRCATVEPGKSWDLTPFCGRSTCVQNEENDAKLFELVE 93

Query: 364 DCGPLPLTNPKCQLDTEKTNKTAPFPGCCPIFTCEEGAK 480
           DCGPLPL N KC+LDTEKTNKTA FP CCPIFTC+ G K
Sbjct: 94  DCGPLPLANDKCKLDTEKTNKTASFPYCCPIFTCDPGVK 132


>AE014298-1544|AAF47993.1|  160|Drosophila melanogaster CG2081-PB,
           isoform B protein.
          Length = 160

 Score = 32.3 bits (70), Expect = 0.89
 Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
 Frame = +1

Query: 349 LELVEDCGPLP-LTNPKCQLDTEKTNKTAPFPGCCPIFTCE 468
           L+L ED   +P LT   C      TN  A +P CCP++ C+
Sbjct: 68  LQLWEDSCQVPKLTQGNCT-PVPSTNPHAEYPRCCPLYECK 107


>AE014298-1565|AAF48006.1|  115|Drosophila melanogaster CG15202-PA
           protein.
          Length = 115

 Score = 29.9 bits (64), Expect = 4.7
 Identities = 21/84 (25%), Positives = 35/84 (41%), Gaps = 1/84 (1%)
 Frame = +1

Query: 223 DFPGMCFASTRCITVEPGNTWELSPFCGRSTCVVSEDQPPRLLELVEDCGPLPLT-NPKC 399
           D+PG C+       +    +++  P      C     +P  +LE +  CG   L    KC
Sbjct: 32  DYPGQCYYEELNQAIPKKQSYK--PINREGYCQSIYCRPDYVLE-ISYCGRHNLVPTEKC 88

Query: 400 QLDTEKTNKTAPFPGCCPIFTCEE 471
           ++ ++       FP CCP   C+E
Sbjct: 89  RIASDMRRT---FPECCPKLVCQE 109


>M17119-1|AAA28313.1|  345|Drosophila melanogaster protein (
           D.melanogaster scutegene encoding nerve differentiation,
           complete cds. ).
          Length = 345

 Score = 29.1 bits (62), Expect = 8.3
 Identities = 12/20 (60%), Positives = 12/20 (60%)
 Frame = +2

Query: 344 GCWSLSKTADLCHSPTPSAN 403
           GC S SK    CHSPT S N
Sbjct: 255 GCVSTSKNQQTCHSPTSSFN 274


>BT022151-1|AAY51546.1|  345|Drosophila melanogaster IP01419p
           protein.
          Length = 345

 Score = 29.1 bits (62), Expect = 8.3
 Identities = 12/20 (60%), Positives = 12/20 (60%)
 Frame = +2

Query: 344 GCWSLSKTADLCHSPTPSAN 403
           GC S SK    CHSPT S N
Sbjct: 255 GCVSTSKNQQTCHSPTSSFN 274


>AL024453-1|CAA19657.1|  345|Drosophila melanogaster
           EG:198A6.1,FBgn0004170;sc protein.
          Length = 345

 Score = 29.1 bits (62), Expect = 8.3
 Identities = 12/20 (60%), Positives = 12/20 (60%)
 Frame = +2

Query: 344 GCWSLSKTADLCHSPTPSAN 403
           GC S SK    CHSPT S N
Sbjct: 255 GCVSTSKNQQTCHSPTSSFN 274


>AE014298-28|AAF45499.1|  345|Drosophila melanogaster CG3827-PA
           protein.
          Length = 345

 Score = 29.1 bits (62), Expect = 8.3
 Identities = 12/20 (60%), Positives = 12/20 (60%)
 Frame = +2

Query: 344 GCWSLSKTADLCHSPTPSAN 403
           GC S SK    CHSPT S N
Sbjct: 255 GCVSTSKNQQTCHSPTSSFN 274


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,681,698
Number of Sequences: 53049
Number of extensions: 590903
Number of successful extensions: 1407
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1356
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1406
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4188579408
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)