Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P28_F_P20
(893 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 547 e-156
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 539 e-153
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 538 e-153
SB_56| Best HMM Match : Actin (HMM E-Value=0) 538 e-153
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 436 e-123
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 286 2e-77
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 285 4e-77
SB_54| Best HMM Match : Actin (HMM E-Value=0) 256 1e-68
SB_3885| Best HMM Match : Actin (HMM E-Value=0.77) 206 2e-53
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 171 5e-43
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 106 2e-23
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 105 4e-23
SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) 71 1e-12
SB_13344| Best HMM Match : Actin (HMM E-Value=1.5e-07) 60 2e-09
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) 60 3e-09
SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12) 59 4e-09
SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) 56 4e-08
SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 1e-06
SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24) 40 0.004
SB_25667| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.41
SB_49803| Best HMM Match : S-antigen (HMM E-Value=3.5) 32 0.54
SB_10273| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.72
SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_13911| Best HMM Match : PAN (HMM E-Value=0.033) 31 1.7
SB_36971| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.2
SB_20236| Best HMM Match : Pec_lyase_N (HMM E-Value=6.6) 30 2.2
SB_54914| Best HMM Match : Patched (HMM E-Value=1.3e-09) 30 2.9
SB_8780| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.9
SB_8646| Best HMM Match : 7tm_1 (HMM E-Value=1.2e-27) 30 2.9
SB_40933| Best HMM Match : DUF548 (HMM E-Value=1.7) 29 3.8
SB_43551| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.027) 29 5.1
SB_55729| Best HMM Match : YajC (HMM E-Value=0.56) 29 6.7
SB_21643| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.7
SB_28336| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.9
SB_8336| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.84) 28 8.9
SB_56225| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.9
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 547 bits (1350), Expect = e-156
Identities = 256/269 (95%), Positives = 261/269 (97%)
Frame = +2
Query: 71 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 250
MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 251 SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 430
SKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 431 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLD 610
TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAILRLD
Sbjct: 121 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLD 180
Query: 611 LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATXAXSTSLEKS 790
LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM T A S+SLEKS
Sbjct: 181 LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMTTAASSSSLEKS 240
Query: 791 YELPDGQVITIGNXRFRCPEALFXPFLPG 877
YELPDGQVITIGN RFRCPEA+F P G
Sbjct: 241 YELPDGQVITIGNERFRCPEAMFQPSFLG 269
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 539 bits (1329), Expect = e-153
Identities = 252/269 (93%), Positives = 260/269 (96%)
Frame = +2
Query: 71 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 250
M DD++AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MEDDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 251 SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 430
SKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 431 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLD 610
TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAI+RLD
Sbjct: 121 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAIIRLD 180
Query: 611 LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATXAXSTSLEKS 790
LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM T A S+SLEKS
Sbjct: 181 LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMETAASSSSLEKS 240
Query: 791 YELPDGQVITIGNXRFRCPEALFXPFLPG 877
YELPDGQVITIGN RFRCPEA+F P G
Sbjct: 241 YELPDGQVITIGNERFRCPEAMFQPSFLG 269
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 538 bits (1327), Expect = e-153
Identities = 253/267 (94%), Positives = 259/267 (97%)
Frame = +2
Query: 77 DDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 256
+DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 EDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 257 RGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 436
RGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ
Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 121
Query: 437 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 616
IMFETFNSPAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAILRLDLA
Sbjct: 122 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLA 181
Query: 617 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATXAXSTSLEKSYE 796
GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKL YVALDFEQEMAT A S+SLEKSYE
Sbjct: 182 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLAYVALDFEQEMATAAASSSLEKSYE 241
Query: 797 LPDGQVITIGNXRFRCPEALFXPFLPG 877
LPDGQVITIGN RFRCPEA+F P G
Sbjct: 242 LPDGQVITIGNERFRCPEAMFQPSFLG 268
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 538 bits (1327), Expect = e-153
Identities = 252/267 (94%), Positives = 259/267 (97%)
Frame = +2
Query: 77 DDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 256
+D+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 EDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 257 RGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 436
RGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ
Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 121
Query: 437 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 616
IMFETFNSPAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAILRLDLA
Sbjct: 122 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLA 181
Query: 617 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATXAXSTSLEKSYE 796
GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM T A S+SLEKSYE
Sbjct: 182 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMQTAASSSSLEKSYE 241
Query: 797 LPDGQVITIGNXRFRCPEALFXPFLPG 877
LPDGQVITIGN RFRCPEA+F P G
Sbjct: 242 LPDGQVITIGNERFRCPEAMFQPSFLG 268
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 436 bits (1075), Expect = e-123
Identities = 217/269 (80%), Positives = 225/269 (83%)
Frame = +2
Query: 71 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 250
M DDD+AALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MADDDIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 251 SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 430
SKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 431 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLD 610
TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIV+DS G + H +
Sbjct: 121 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDS------------GDGVSHTV---- 164
Query: 611 LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATXAXSTSLEKS 790
I ERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM T A S+S+EKS
Sbjct: 165 -----------PIYEERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMQTAASSSSIEKS 213
Query: 791 YELPDGQVITIGNXRFRCPEALFXPFLPG 877
YELPDGQVITIGN RFRCPEAL P G
Sbjct: 214 YELPDGQVITIGNERFRCPEALLQPSFLG 242
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 286 bits (701), Expect = 2e-77
Identities = 133/264 (50%), Positives = 180/264 (68%), Gaps = 3/264 (1%)
Frame = +2
Query: 89 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAQSKRG 262
+ +V DNG+G K G+AG + P +FPS+VGRP R + + KD VGDEA R
Sbjct: 7 SVIVCDNGTGFVKCGYAGSNFPAHIFPSMVGRPIIRSSQKVGDIEVKDLMVGDEASQLRY 66
Query: 263 ILTLKYPIEHGIITNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNPKANREKMTQI 439
+L + YP+++GI+ NWDDM+ +W +TF +++ + P VLLTE PLNP NREKM ++
Sbjct: 67 MLEVNYPMDNGIVRNWDDMKHVWDYTFGESKMNIDPRNTKVLLTEPPLNPMKNREKMIEV 126
Query: 440 MFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 619
MFE + +Y+AIQAVL+LYA G TG+V+DSGDGV+H P+YEG+ALPH RLD+AG
Sbjct: 127 MFENYQFEGVYIAIQAVLTLYAQGLLTGVVIDSGDGVTHICPVYEGFALPHLTRRLDIAG 186
Query: 620 RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATXAXSTSLEKSYEL 799
RD+T YL+K++ RGY+F TA+ E VR +KEKLCYV + EQE +T L + Y L
Sbjct: 187 RDITKYLIKLMLLRGYAFNHTADFETVRMMKEKLCYVGYNIEQEQKLALETTVLVEQYTL 246
Query: 800 PDGQVITIGNXRFRCPEALFXPFL 871
PDG+V+ + RF PEALF P L
Sbjct: 247 PDGRVVKLSGERFEAPEALFQPHL 270
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 285 bits (698), Expect = 4e-77
Identities = 136/154 (88%), Positives = 143/154 (92%)
Frame = +2
Query: 416 NREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHA 595
N + M +IMFETFNSPAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHA
Sbjct: 78 NWDDMEKIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHA 137
Query: 596 ILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATXAXST 775
I+RLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM T A S+
Sbjct: 138 IIRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMQTAASSS 197
Query: 776 SLEKSYELPDGQVITIGNXRFRCPEALFXPFLPG 877
SLEKSYELPDGQVITIGN RFRCPEA+F P G
Sbjct: 198 SLEKSYELPDGQVITIGNERFRCPEAMFQPSFLG 231
Score = 186 bits (452), Expect = 3e-47
Identities = 84/89 (94%), Positives = 86/89 (96%)
Frame = +2
Query: 77 DDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 256
DDDVAALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 DDDVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 257 RGILTLKYPIEHGIITNWDDMEKIWHHTF 343
RGILTLKYPIEHGI+TNWDDMEKI TF
Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIMFETF 90
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 256 bits (628), Expect = 1e-68
Identities = 118/185 (63%), Positives = 144/185 (77%)
Frame = +2
Query: 323 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLY 502
K+W H F ++LRV E+ PVLLTEAPLNPK NRE+M Q+MFE+FN P MYVA+QAV++LY
Sbjct: 2130 KMWEHAF-DQLRVRGEDFPVLLTEAPLNPKMNRERMVQLMFESFNVPCMYVAVQAVMALY 2188
Query: 503 ASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTT 682
ASGRTTG V D GDGVSHTVP+Y+GY LPHA R+DLAGRDLT YL +++TERGYSF +T
Sbjct: 2189 ASGRTTGTVFDCGDGVSHTVPVYDGYWLPHATQRIDLAGRDLTHYLQRLVTERGYSFQST 2248
Query: 683 AEREIVRDIKEKLCYVALDFEQEMATXAXSTSLEKSYELPDGQVITIGNXRFRCPEALFX 862
AE++I+RD+KE LCY A+D+E+E+ S E Y LPDGQ I IG+ RFR E LF
Sbjct: 2249 AEQQIIRDLKETLCYCAMDYERELKEAETSDDCEAPYMLPDGQSIRIGSERFRAAEPLFQ 2308
Query: 863 PFLPG 877
P L G
Sbjct: 2309 PSLLG 2313
Score = 61.3 bits (142), Expect = 1e-09
Identities = 31/62 (50%), Positives = 40/62 (64%)
Frame = +2
Query: 11 GLAAVESIPASPTQTHTKFKMCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPR 190
G AV AS T+ F+ V +V+DNGSG CKAG + D++PR VFP+IVGRPR
Sbjct: 2071 GPPAVAMNIASVTKQQAAFEQNGGTV--VVIDNGSGFCKAGLSTDESPRVVFPAIVGRPR 2128
Query: 191 HQ 196
H+
Sbjct: 2129 HK 2130
>SB_3885| Best HMM Match : Actin (HMM E-Value=0.77)
Length = 152
Score = 206 bits (503), Expect = 2e-53
Identities = 97/106 (91%), Positives = 102/106 (96%)
Frame = +2
Query: 437 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 616
IMFE FNSPA+YVAIQAVLSLYASGRTTG+V DSGDGVSH VPIYEGYALPHAILRLDLA
Sbjct: 1 IMFEAFNSPAVYVAIQAVLSLYASGRTTGVVFDSGDGVSHNVPIYEGYALPHAILRLDLA 60
Query: 617 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM 754
GRDLTDYLMK++TERGYSFTTTAEREIVRDIKEKLCYVALDF QE+
Sbjct: 61 GRDLTDYLMKLMTERGYSFTTTAEREIVRDIKEKLCYVALDFYQEI 106
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 171 bits (417), Expect = 5e-43
Identities = 74/116 (63%), Positives = 101/116 (87%)
Frame = +2
Query: 371 EHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGV 550
+HPVLLTEAPLNP+ NREK ++ FETFN PA+++++QAVLSLYA+GRTTG+VLD+GDGV
Sbjct: 126 QHPVLLTEAPLNPRRNREKAAEVFFETFNVPALFISMQAVLSLYATGRTTGVVLDAGDGV 185
Query: 551 SHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEK 718
SH+VPIYEG+A+PH+I+R D+AGRD++ YL +L + G+ F +++E EIVR IKE+
Sbjct: 186 SHSVPIYEGFAMPHSIMRTDIAGRDVSRYLRLLLRKEGHCFHSSSELEIVRTIKEE 241
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 106 bits (255), Expect = 2e-23
Identities = 56/131 (42%), Positives = 79/131 (60%), Gaps = 1/131 (0%)
Frame = +2
Query: 482 QAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTE- 658
Q LSLYASG T G+ L SG + IYEG+ L H + L++ G LT+ L + L +
Sbjct: 767 QLSLSLYASGMTLGVCLSSGFSCTQAAVIYEGHTLNHTLQTLEIGGHHLTENLKQYLRDQ 826
Query: 659 RGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATXAXSTSLEKSYELPDGQVITIGNXRF 838
RG++FT+++ +IV DIKEK+CY++ D +E+ + L K Y LPDGQ+I+IG
Sbjct: 827 RGHNFTSSSGWQIVNDIKEKICYLSKDHLKEVHNYKTNEGLTKFYTLPDGQMISIGYECI 886
Query: 839 RCPEALFXPFL 871
E LF P L
Sbjct: 887 SSMEPLFRPDL 897
Score = 56.4 bits (130), Expect = 3e-08
Identities = 31/84 (36%), Positives = 50/84 (59%), Gaps = 3/84 (3%)
Frame = +2
Query: 32 IPASPTQTHTKFKMCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG 211
IP + + ++ FK+ A+V+DNG G+ K GFAGD PR + P++VG P+ +++G
Sbjct: 683 IPRTKKRRYS-FKLDSHYNRAIVLDNGCGISKIGFAGDRVPRIIQPAVVGNPQRFSMLIG 741
Query: 212 --MGQKD-SYVGDEAQSKRGILTL 274
+ KD GD A +K G++ L
Sbjct: 742 DNVNVKDYKKYGDAAVAKSGVMHL 765
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 105 bits (253), Expect = 4e-23
Identities = 48/126 (38%), Positives = 80/126 (63%)
Frame = +2
Query: 281 PIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNS 460
PI+ G+I +WD EKI + + ++ HP+L++EA N + REK+T++MFE +N
Sbjct: 3 PIKDGMIEDWDLFEKILDYIYSKNIKSDSALHPLLMSEAAWNTRIKREKLTELMFEKYNV 62
Query: 461 PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYL 640
PA ++ +VL+ +A+GR+ G+V+DSG + VP+++GY L AI+R LAG +T
Sbjct: 63 PAFFLCKNSVLTAFANGRSNGLVIDSGATQTSAVPVHDGYVLQQAIVRSPLAGDFITAQC 122
Query: 641 MKILTE 658
++ E
Sbjct: 123 RQMFEE 128
>SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)
Length = 543
Score = 70.9 bits (166), Expect = 1e-12
Identities = 40/102 (39%), Positives = 58/102 (56%), Gaps = 8/102 (7%)
Frame = +2
Query: 476 AIQAVLSLYASG-------RT-TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLT 631
A +AVL+L AS RT TG V+DSGDGV+H +P+ EGY + I + +AGRD+T
Sbjct: 40 ATKAVLALAASWTSRQVGERTLTGCVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRDIT 99
Query: 632 DYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMA 757
++ ++L ER E + IKE+ Y+ D +E A
Sbjct: 100 FFVQQLLREREMGIPPEQSMETAKTIKERWGYICPDIAKEFA 141
>SB_13344| Best HMM Match : Actin (HMM E-Value=1.5e-07)
Length = 149
Score = 60.5 bits (140), Expect = 2e-09
Identities = 28/42 (66%), Positives = 31/42 (73%)
Frame = +2
Query: 752 MATXAXSTSLEKSYELPDGQVITIGNXRFRCPEALFXPFLPG 877
M A S LEK+YELPDGQVI+IGN RFRCPEA+F P G
Sbjct: 1 MDIDANSPILEKTYELPDGQVISIGNERFRCPEAMFQPAFLG 42
>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
Length = 580
Score = 59.7 bits (138), Expect = 3e-09
Identities = 61/251 (24%), Positives = 109/251 (43%), Gaps = 11/251 (4%)
Frame = +2
Query: 86 VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI 265
+A LV+D G+ K GFA + APR++ P+ + + + + ++ ++GD+ + +
Sbjct: 233 MATLVLDCGACSQKIGFASNQAPRSI-PNAIFKAKSE-------RRKLFIGDQIEECKDY 284
Query: 266 LTLKY--PIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 439
L Y P + G + NWD ++IW +TF E + M +I
Sbjct: 285 SALFYVLPFQKGFLVNWDVEKQIWDYTFGKE--------------------GLEDAMDEI 324
Query: 440 MFETFNSPAMYVAIQAVLSLY------ASGRTTGIVLDSGDGVSHTVPIYEGYALPHAIL 601
+FE +N A+ A LS Y S +V+D+G +H VP++ G + A+
Sbjct: 325 LFEEYNFKALSRTTAAQLSAYKCHQDMVSKNPVCLVVDTGYSFTHIVPVFNGKVIKKAVR 384
Query: 602 RLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATX---AXS 772
R + +L E +F ++ +KE CYV+ F ++M
Sbjct: 385 R-----------QLHVLDE---TF-------VINQVKEDTCYVSSQFYKDMEIARQRGKE 423
Query: 773 TSLEKSYELPD 805
++ + Y LPD
Sbjct: 424 NTIVREYVLPD 434
>SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12)
Length = 1392
Score = 59.3 bits (137), Expect = 4e-09
Identities = 26/34 (76%), Positives = 28/34 (82%)
Frame = +2
Query: 95 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 196
LV+D GS M K GFAGDDAP+ VFP IVGRPRHQ
Sbjct: 1359 LVIDVGSHMWKVGFAGDDAPKGVFPPIVGRPRHQ 1392
>SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)
Length = 372
Score = 56.0 bits (129), Expect = 4e-08
Identities = 25/60 (41%), Positives = 34/60 (56%)
Frame = +2
Query: 209 GMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLL 388
G+ D ++GDEA K T K+PI H I+ +WD ME+ W + LR PE+H LL
Sbjct: 278 GVEDLDFFIGDEAIDKPSYAT-KWPIRHAIVEDWDLMERFWEQCIFKYLRAEPEDHYFLL 336
Score = 32.3 bits (70), Expect = 0.54
Identities = 11/17 (64%), Positives = 15/17 (88%)
Frame = +2
Query: 518 TGIVLDSGDGVSHTVPI 568
TG V+DSGDGV+H +P+
Sbjct: 356 TGCVIDSGDGVTHVIPV 372
>SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 198
Score = 50.8 bits (116), Expect = 1e-06
Identities = 21/39 (53%), Positives = 31/39 (79%)
Frame = -2
Query: 193 VARATHDGREDGAGRVVAGETGLAHAGAIVDYKRSNIVV 77
+AR+ DG E+G+G +V+GETGLAH GAI+D + +I+V
Sbjct: 1 MARSADDGGENGSGSIVSGETGLAHTGAIIDNQSCDIIV 39
>SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24)
Length = 766
Score = 39.5 bits (88), Expect = 0.004
Identities = 20/68 (29%), Positives = 38/68 (55%)
Frame = +2
Query: 326 IWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYA 505
I H F + L+V P +H V++T +E++ +I+ F A+Y+ Q++L++Y+
Sbjct: 513 ILEHAFLS-LKVDPVKHKVIMTIPQNTGLQEKEELVEILLGYFRVQAVYLQEQSILAMYS 571
Query: 506 SGRTTGIV 529
+GIV
Sbjct: 572 YSAVSGIV 579
>SB_25667| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 175
Score = 32.7 bits (71), Expect = 0.41
Identities = 16/49 (32%), Positives = 21/49 (42%)
Frame = +3
Query: 102 STMAPACARPVSPATTRPAPSSRPSWVALATRA*WSVWARKTPTWVTRP 248
S P+ R TT+P P +PSWV + + W TW RP
Sbjct: 36 SPSKPSDTRIADTTTTKPFPGYQPSWVKVK----YGAWYLNPKTWKARP 80
>SB_49803| Best HMM Match : S-antigen (HMM E-Value=3.5)
Length = 257
Score = 32.3 bits (70), Expect = 0.54
Identities = 20/70 (28%), Positives = 31/70 (44%), Gaps = 4/70 (5%)
Frame = -2
Query: 694 FPLSGGGERVTPLGEDLHEVVGQVATSQVQTEDGVGQSVTFVDGYGV----GDTISGVEH 527
F +SG + D H++ + +TS V+ + G + D + T S E
Sbjct: 134 FGISGTANTEEQIDVDKHQITNKASTSSVEKANTAGTTGGTQDQHATQGNKASTCSFEEA 193
Query: 526 DTGGTTGGVQ 497
+T GTTGG Q
Sbjct: 194 NTAGTTGGTQ 203
>SB_10273| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 739
Score = 31.9 bits (69), Expect = 0.72
Identities = 16/36 (44%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +3
Query: 66 SRCATTMLLRL*STM-APACARPVSPATTRPAPSSR 170
S C T+L+R T+ APA +P+SPAT P +R
Sbjct: 632 SSCLATLLVRPLETIPAPAPTKPISPATPASGPPTR 667
>SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 220
Score = 31.1 bits (67), Expect = 1.3
Identities = 15/53 (28%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = +2
Query: 272 LKYPIEHGIITNWDDMEKIWHHTFYNELRVAPE--EHPVLLTEAPLNPKANRE 424
L+ P + ++T+++ E++ H F + P HPV++TE NP R+
Sbjct: 131 LRTPFDRDVVTHYECQEQVLDHAFSHLGINTPGGVNHPVIMTEPVCNPNYCRQ 183
>SB_13911| Best HMM Match : PAN (HMM E-Value=0.033)
Length = 534
Score = 30.7 bits (66), Expect = 1.7
Identities = 12/39 (30%), Positives = 25/39 (64%)
Frame = +2
Query: 413 ANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIV 529
A +E++ +I+ F A+Y+ Q++L++Y+ +GIV
Sbjct: 420 AKKEELVEILLGYFRVQAVYLQEQSILAMYSYSAVSGIV 458
>SB_36971| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1870
Score = 30.3 bits (65), Expect = 2.2
Identities = 17/48 (35%), Positives = 22/48 (45%)
Frame = -2
Query: 658 LGEDLHEVVGQVATSQVQTEDGVGQSVTFVDGYGVGDTISGVEHDTGG 515
L E + +V Q + GV S G+G G TISG D+GG
Sbjct: 1474 LQEAMMPIVSQQTCAAAMRRWGVVTSRMICGGFGAGSTISGCFGDSGG 1521
>SB_20236| Best HMM Match : Pec_lyase_N (HMM E-Value=6.6)
Length = 697
Score = 30.3 bits (65), Expect = 2.2
Identities = 17/36 (47%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +3
Query: 66 SRCATTMLLR-L*STMAPACARPVSPATTRPAPSSR 170
S C T+L+R L +T APA P SPAT P R
Sbjct: 21 SSCLATLLVRPLETTPAPAPTTPTSPATPASGPPIR 56
>SB_54914| Best HMM Match : Patched (HMM E-Value=1.3e-09)
Length = 645
Score = 29.9 bits (64), Expect = 2.9
Identities = 19/62 (30%), Positives = 32/62 (51%)
Frame = -2
Query: 433 GHLLPVGLGVEGGFGEQHGVLLGGDTQLIVEGVVPDLLHVIPVGDDTVLDGVLQSEDTSL 254
G +L V LG+ GFG V G + + GV+P L+ I + D ++ + +D SL
Sbjct: 157 GGILAVALGILAGFGLAMAV---GTPFISLAGVLPFLILGIGIDDMFIIINEMDRQDNSL 213
Query: 253 AL 248
++
Sbjct: 214 SV 215
>SB_8780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 172
Score = 29.9 bits (64), Expect = 2.9
Identities = 16/73 (21%), Positives = 30/73 (41%)
Frame = -3
Query: 618 PAKSRRRMAWGRA*PS*MGTVWETPSPESSTIPVVRPEAYSESTAWMATYMAGELKVSNM 439
P+ + +W P T W +PSP+ T P ++T+W + +S++
Sbjct: 93 PSPQYKTTSWSLPLPQHKTTSWSSPSPKYKTTSWTSPSPQYKTTSWSSPLPQQTTFLSSL 152
Query: 438 IWVIFSLLALGLR 400
+I L + R
Sbjct: 153 YHIIGRLSGVHYR 165
>SB_8646| Best HMM Match : 7tm_1 (HMM E-Value=1.2e-27)
Length = 522
Score = 29.9 bits (64), Expect = 2.9
Identities = 20/56 (35%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Frame = +3
Query: 6 SQVSLP*SQYQRPQHKHTQSSRCATTMLLRL*STM-APACARPVSPATTRPAPSSR 170
+Q LP + P T S C +L+R T+ APA P SPAT P R
Sbjct: 393 AQRPLPADRRSEPLSAKTIVSSCLAPLLVRPLETIPAPAPTTPTSPATPASGPPIR 448
>SB_40933| Best HMM Match : DUF548 (HMM E-Value=1.7)
Length = 682
Score = 29.5 bits (63), Expect = 3.8
Identities = 17/39 (43%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = +3
Query: 57 TQSSRCATTMLLRL*STM-APACARPVSPATTRPAPSSR 170
T S C T+L+R T+ APA P SPAT P R
Sbjct: 109 TSLSSCLATLLVRPLETIPAPAPTTPTSPATPASGPPIR 147
>SB_43551| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.027)
Length = 466
Score = 29.1 bits (62), Expect = 5.1
Identities = 29/115 (25%), Positives = 52/115 (45%), Gaps = 9/115 (7%)
Frame = -3
Query: 558 VWE--TPSPESSTIPVVRPE-------AYSESTAWMATYMAGELKVSNMIWVIFSLLALG 406
VWE T P + T+P + + Y S +W+ L N ++++F +LG
Sbjct: 3 VWELSTTGPTNRTVPTIIIDYAICTEVLYKTSGSWIRICDI-VLLAPNAMFMVFLFYSLG 61
Query: 405 LRGASVSSTGCSSGATRSSL*KVWCQIFSMSSQLVMIPCSMGYFRVRIPLLLWAS 241
L A + T C T +L ++ ++++SQ+ + C + R +LL AS
Sbjct: 62 LAHAKLVGTRCPIVKTIYTLLLLYGIHYTLNSQVFAV-CVVSVARCFASMLLTAS 115
>SB_55729| Best HMM Match : YajC (HMM E-Value=0.56)
Length = 654
Score = 28.7 bits (61), Expect = 6.7
Identities = 15/33 (45%), Positives = 17/33 (51%)
Frame = -2
Query: 601 EDGVGQSVTFVDGYGVGDTISGVEHDTGGTTGG 503
+DG G VDG GVGD G + D G GG
Sbjct: 9 DDGDGGGDDGVDGGGVGDDGDGDDSDCGDDGGG 41
>SB_21643| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1974
Score = 28.7 bits (61), Expect = 6.7
Identities = 13/50 (26%), Positives = 24/50 (48%)
Frame = +2
Query: 416 NREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVP 565
NR + +++ E S ++ + +L+LY RT D+ + HT P
Sbjct: 437 NRVEFVKLLLENGVSMGQFLTPERLLALYRGVRTCNATPDNNNRACHTTP 486
>SB_28336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 28.3 bits (60), Expect = 8.9
Identities = 12/43 (27%), Positives = 23/43 (53%)
Frame = +2
Query: 401 LNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIV 529
+ PK ++ ++F F P M +A++ + A+G TGI+
Sbjct: 174 ITPKRATSQIIFVLFCIFGLPVMMLALKTAGDIIAAGLKTGII 216
>SB_8336| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.84)
Length = 509
Score = 28.3 bits (60), Expect = 8.9
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = +3
Query: 51 KHTQSSRCATTMLLRL*STMAPACARPVSPATTRPAPSSRPS 176
K T ++ ATT + +T PA P +P TT P ++ P+
Sbjct: 63 KPTNTTPPATTTPTKPTTTTPPATTTPTTPTTTTPPATTTPT 104
>SB_56225| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 494
Score = 28.3 bits (60), Expect = 8.9
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = +3
Query: 66 SRCATTMLLRL*STM-APACARPVSPATTRPAPSSR 170
S C T+L+R T+ APA P SPAT P R
Sbjct: 72 SSCLATLLVRPLETIPAPAPTTPTSPATPASGPPIR 107
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,827,728
Number of Sequences: 59808
Number of extensions: 579608
Number of successful extensions: 1979
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 1698
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1971
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2562198215
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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