Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P28_F_P19
(878 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861; ... 360 3e-98
UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;... 358 1e-97
UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498... 356 5e-97
UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941; ... 354 1e-96
UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;... 318 1e-85
UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179; ... 317 3e-85
UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2 pol... 315 8e-85
UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825; ... 307 3e-82
UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3; Alphaproteob... 290 3e-77
UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181; ... 287 3e-76
UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1; Na... 281 1e-74
UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular or... 276 5e-73
UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9; Co... 270 3e-71
UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42; N... 256 5e-67
UniRef50_Q6TP93 Cluster: Cytochrome c oxidase subunit I; n=2; Br... 255 9e-67
UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7; Ec... 248 2e-64
UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517; ... 247 3e-64
UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107; ... 230 4e-59
UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI... 227 2e-58
UniRef50_P29649 Cluster: Cytochrome c oxidase subunit 1; n=441; ... 224 2e-57
UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7; Eu... 215 2e-54
UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388; ... 212 9e-54
UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa group|... 212 1e-53
UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 212 1e-53
UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126; ... 205 1e-51
UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida stellata|... 205 1e-51
UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3; Bacteria|... 204 2e-51
UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase, sub... 197 3e-49
UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2; Roseiflexus|... 197 4e-49
UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 197 4e-49
UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 195 1e-48
UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4... 192 8e-48
UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subuni... 192 1e-47
UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16; c... 191 2e-47
UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1; Di... 190 3e-47
UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-) ... 189 9e-47
UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Eugl... 188 2e-46
UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16; B... 187 4e-46
UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase polype... 186 9e-46
UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5; P... 185 1e-45
UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15; F... 117 2e-45
UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacil... 184 3e-45
UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17; B... 184 3e-45
UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1; Bl... 179 1e-43
UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1; Pl... 177 3e-43
UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3; Th... 175 1e-42
UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93; A... 175 2e-42
UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III ... 173 7e-42
UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1; M... 172 1e-41
UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30; Proteobacte... 171 2e-41
UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobac... 170 3e-41
UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=... 170 5e-41
UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2; Acidobacteri... 169 8e-41
UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit... 167 2e-40
UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=... 165 2e-39
UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alp... 163 4e-39
UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.... 163 5e-39
UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3; Rhodobacte... 163 7e-39
UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13; ... 162 9e-39
UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=... 162 1e-38
UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48; O... 161 3e-38
UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol oxid... 159 7e-38
UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;... 159 1e-37
UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2; D... 158 2e-37
UniRef50_Q9XLV8 Cluster: Cytochrome c oxidase subunit I; n=1; Di... 155 1e-36
UniRef50_Q8LX70 Cluster: Cytochrome c oxidase subunit I; n=4; Ch... 155 2e-36
UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3; Proteobacter... 153 6e-36
UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2; Cystobacteri... 150 5e-35
UniRef50_A5FXH8 Cluster: Cytochrome-c oxidase; n=1; Acidiphilium... 147 3e-34
UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit ... 147 4e-34
UniRef50_Q4XXN6 Cluster: Putative uncharacterized protein; n=1; ... 146 5e-34
UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5; Sulfol... 144 3e-33
UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2; Rh... 140 4e-32
UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15; Proteob... 139 1e-31
UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5; Na... 134 2e-30
UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3; Ha... 134 2e-30
UniRef50_Q9TAP9 Cluster: Cytochrome c oxidase subunit I; n=2; To... 128 2e-28
UniRef50_Q6XYE8 Cluster: Cytochrome c oxidase subunit I; n=2; En... 128 2e-28
UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;... 114 3e-24
UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida stellata|... 111 2e-23
UniRef50_O86945 Cluster: Sub-unit I of an aa3-type cytochrome ox... 110 5e-23
UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30; P... 103 8e-21
UniRef50_Q8LX74 Cluster: Cytochrome c oxidase subunit I; n=1; Ch... 97 5e-19
UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26; B... 95 2e-18
UniRef50_Q9TCV5 Cluster: Cytochrome c oxidase subunit I; n=6; Di... 85 2e-15
UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455; ... 79 2e-13
UniRef50_Q8LX68 Cluster: Cytochrome oxidase I; n=2; Chaoborus|Re... 77 6e-13
UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106; ... 74 4e-12
UniRef50_Q6RJT8 Cluster: Cytochrome c oxidase subunit 2; n=1; Ha... 73 7e-12
UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI... 73 1e-11
UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1; Peri... 71 4e-11
UniRef50_Q5VI63 Cluster: SoxB; n=3; Sulfolobaceae|Rep: SoxB - Ac... 71 4e-11
UniRef50_Q396U4 Cluster: Cytochrome c oxidase, subunit I; n=18; ... 70 7e-11
UniRef50_Q8LX82 Cluster: Cytochrome c oxidase subunit I; n=3; Ch... 69 2e-10
UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4 pre... 69 2e-10
UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein; ... 65 3e-09
UniRef50_A5URU0 Cluster: Cytochrome c oxidase, subunit I; n=4; C... 64 3e-09
UniRef50_A3H8Y4 Cluster: Cytochrome-c oxidase precursor; n=1; Ca... 64 4e-09
UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa gro... 64 6e-09
UniRef50_P98004 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-) ... 63 8e-09
UniRef50_Q6RCN4 Cluster: Cytochrome c oxidase subunit I; n=1; Bu... 62 1e-08
UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|R... 62 2e-08
UniRef50_Q981A5 Cluster: Heme bearing subunit I of the terminal ... 61 3e-08
UniRef50_Q8ZXC1 Cluster: Cytochrome C oxidase subunit I; n=3; Py... 59 1e-07
UniRef50_Q604Y9 Cluster: Cytochrome c oxidase, subunit I; n=1; M... 58 3e-07
UniRef50_Q9TCU2 Cluster: Cytochrome c oxidase subunit I; n=1; Ta... 57 7e-07
UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Ae... 57 7e-07
UniRef50_Q9KEW0 Cluster: Cytochrome c oxidase subunit I; n=8; Ba... 55 2e-06
UniRef50_A2T428 Cluster: Putative uncharacterized protein ORF820... 55 3e-06
UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|R... 55 3e-06
UniRef50_A7D123 Cluster: Cytochrome-c oxidase; n=1; Halorubrum l... 53 8e-06
UniRef50_O99652 Cluster: Cytochrome c oxidase subunit I; n=1; Te... 53 1e-05
UniRef50_Q9YBH5 Cluster: Cytochrome c oxidase (Ba3-type) subunit... 51 3e-05
UniRef50_O07289 Cluster: Subunit I-homologue of cytochrome oxida... 49 2e-04
UniRef50_Q7YI87 Cluster: Cytochrome oxidase subunit I; n=1; Cela... 48 2e-04
UniRef50_Q28SZ6 Cluster: Cytochrome c oxidase subunit I; n=1; Ja... 47 7e-04
UniRef50_Q9MFX8 Cluster: Cytochrome oxidase I; n=5; Echinometra ... 46 0.001
UniRef50_O67937 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 46 0.001
UniRef50_Q2VQT0 Cluster: Heme-copper oxygen reductase; n=1; Rhod... 46 0.001
UniRef50_Q9B9T9 Cluster: Cytochrome oxidase subunit 1; n=7; Locu... 44 0.005
UniRef50_Q9TAP7 Cluster: Cytochrome oxidase subunit 1; n=1; Clon... 43 0.012
UniRef50_Q2W549 Cluster: Heme/copper-type cytochrome/quinol oxid... 42 0.016
UniRef50_Q8HN76 Cluster: Cytochrome c oxidase subunit I; n=21; A... 42 0.021
UniRef50_Q6RHX4 Cluster: Cytochrome c oxidase subunit I; n=26; E... 37 0.59
UniRef50_Q3INR3 Cluster: Cytochrome-c-like terminal oxidase, sub... 37 0.59
UniRef50_Q9EMW4 Cluster: AMV085; n=1; Amsacta moorei entomopoxvi... 35 3.1
UniRef50_Q2Y5N3 Cluster: Integral membrane proteins containing u... 35 3.1
UniRef50_Q56408 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 33 7.2
UniRef50_Q48874 Cluster: SakB; n=2; Lactobacillus sakei|Rep: Sak... 33 9.6
UniRef50_Q5CTJ9 Cluster: Cation-transporting ATPase; n=2; Crypto... 33 9.6
UniRef50_A5I8K9 Cluster: Putative uncharacterized protein; n=1; ... 33 9.6
>UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861;
root|Rep: Cytochrome c oxidase subunit 1 - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 516
Score = 360 bits (885), Expect = 3e-98
Identities = 171/271 (63%), Positives = 200/271 (73%)
Frame = +2
Query: 5 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYIL 184
AV +TA A IT+LLTDRNLNT+FFDPAGGGDPILYQHLF FFGHPEVYIL
Sbjct: 187 AVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYIL 246
Query: 185 ILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFT 364
ILPGFGIISH+++ GKKE F FIV AHH+FTVG+D+DTRAYFT
Sbjct: 247 ILPGFGIISHVVAYYAGKKEPFGYMGMVWAMMAIGLLGFIVWAHHMFTVGMDVDTRAYFT 306
Query: 365 SATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDIT 544
SAT+IIA+PTG+K+F LAT+HG I + +L LGF+FLFTVGGLTG++LANSS+DI
Sbjct: 307 SATMIIAIPTGVKVFSWLATLHGGAIKWETPMLWALGFIFLFTVGGLTGIVLANSSLDIV 366
Query: 545 LHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVNITFF 724
LHDTYYVVAHFHYVLS + +PLFTG +LNS KI F +FIGVN+TFF
Sbjct: 367 LHDTYYVVAHFHYVLSMGAVFAIMAGFVHWFPLFTGYTLNSVWTKIHFGVMFIGVNLTFF 426
Query: 725 PQHFLGLAGIPRRYSDYPDSYIS*NIIXSLG 817
PQHFLGLAG+PRRYSDYPD+Y N + S+G
Sbjct: 427 PQHFLGLAGMPRRYSDYPDAYALWNTVSSIG 457
>UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;
Bilateria|Rep: Cytochrome c oxidase subunit I - Cotesia
melitaearum (Parasitoid wasp)
Length = 499
Score = 358 bits (880), Expect = 1e-97
Identities = 169/271 (62%), Positives = 199/271 (73%)
Frame = +2
Query: 5 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYIL 184
+V ITA AGAIT+LLTDRN+NTSFFDP+GGGDPILYQHLF FFGHPEVYIL
Sbjct: 171 SVFITAILLLLSLPVLAGAITMLLTDRNMNTSFFDPSGGGDPILYQHLFWFFGHPEVYIL 230
Query: 185 ILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFT 364
ILPGFGIISH+I E GKKETF FIV AHH+FT+G+D+DTRAYFT
Sbjct: 231 ILPGFGIISHMIFNESGKKETFGMLGMIYAMLTIGFLGFIVWAHHMFTIGMDVDTRAYFT 290
Query: 365 SATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDIT 544
SAT+IIA+PTGIKIF +AT G ++ N IL +GF+FLFTVGGLTGV+L+NSS+D+
Sbjct: 291 SATMIIAIPTGIKIFSWMATFSGVKLMNNLMILWTMGFIFLFTVGGLTGVVLSNSSVDVV 350
Query: 545 LHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVNITFF 724
LHDTYY VAHFHYVLS +P+F GL +N Y LKI F+ FIGVN+ FF
Sbjct: 351 LHDTYYGVAHFHYVLSMGAVFSILGGFIYWFPMFFGLMMNEYFLKIHFYLTFIGVNLIFF 410
Query: 725 PQHFLGLAGIPRRYSDYPDSYIS*NIIXSLG 817
PQHFLGL+G+PRRYSDYPD Y++ N+ S G
Sbjct: 411 PQHFLGLSGMPRRYSDYPDMYLNWNLFSSFG 441
>UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498;
root|Rep: Cytochrome c oxidase subunit 1 - Homo sapiens
(Human)
Length = 513
Score = 356 bits (875), Expect = 5e-97
Identities = 167/271 (61%), Positives = 203/271 (74%)
Frame = +2
Query: 5 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYIL 184
+V ITA A IT+LLTDRNLNT+FFDPAGGGDPILYQHLF FFGHPEVYIL
Sbjct: 187 SVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYIL 246
Query: 185 ILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFT 364
ILPGFG+ISHI++ GKKE F FIV AHH+FTVG+D+DTRAYFT
Sbjct: 247 ILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFT 306
Query: 365 SATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDIT 544
SAT+IIA+PTG+K+F LAT+HG+ + ++ +L LGF+FLFTVGGLTG++LANSS+DI
Sbjct: 307 SATMIIAIPTGVKVFSWLATLHGSNMKWSAAVLWALGFIFLFTVGGLTGIVLANSSLDIV 366
Query: 545 LHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVNITFF 724
LHDTYYVVAHFHYVLS + +PLF+G +L+ KI F +FIGVN+TFF
Sbjct: 367 LHDTYYVVAHFHYVLSMGAVFAIMGGFIHWFPLFSGYTLDQTYAKIHFTIMFIGVNLTFF 426
Query: 725 PQHFLGLAGIPRRYSDYPDSYIS*NIIXSLG 817
PQHFLGL+G+PRRYSDYPD+Y + NI+ S+G
Sbjct: 427 PQHFLGLSGMPRRYSDYPDAYTTWNILSSVG 457
>UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Ophisurus macrorhynchos
Length = 546
Score = 354 bits (871), Expect = 1e-96
Identities = 168/271 (61%), Positives = 199/271 (73%)
Frame = +2
Query: 5 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYIL 184
+V +TA A IT+LLTDRNLNT+FFDPAGGGDPILYQHLF FFGHPEVYIL
Sbjct: 187 SVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYIL 246
Query: 185 ILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFT 364
ILPGFG+ISH+++ GKKE F FIV AHH+FTVG+D+DTRAYFT
Sbjct: 247 ILPGFGMISHVVTYYAGKKEPFGYMGMVWAMMAIGLLGFIVWAHHMFTVGMDVDTRAYFT 306
Query: 365 SATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDIT 544
SAT+IIA+PTG+K+F LAT+HG I + +L LGF+FLFTVGGLTG++LANSSIDI
Sbjct: 307 SATMIIAIPTGVKVFSWLATLHGGAIKWETPMLWALGFIFLFTVGGLTGIVLANSSIDIV 366
Query: 545 LHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVNITFF 724
LHDTYYVVAHFHYVLS + +PLFTG +L+ KI F +FIGVN+TFF
Sbjct: 367 LHDTYYVVAHFHYVLSMGAVFAIMAGFVHWFPLFTGYTLHDTWTKIHFGVMFIGVNLTFF 426
Query: 725 PQHFLGLAGIPRRYSDYPDSYIS*NIIXSLG 817
PQHFLGLAG+PRRYSDYPD+Y N + S+G
Sbjct: 427 PQHFLGLAGMPRRYSDYPDAYTLWNTVSSIG 457
>UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 527
Score = 318 bits (781), Expect = 1e-85
Identities = 156/271 (57%), Positives = 185/271 (68%)
Frame = +2
Query: 5 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYIL 184
+V +TAF AGAIT+LLTDRN NT+FFDPAGGGDPILYQHLF FFGHPEVYIL
Sbjct: 190 SVLVTAFLLLLSLPVLAGAITMLLTDRNFNTTFFDPAGGGDPILYQHLFWFFGHPEVYIL 249
Query: 185 ILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFT 364
ILPGFGIISHI+S GK F F+V AHH+FTVG+D+DTRAYFT
Sbjct: 250 ILPGFGIISHIVSTFSGKP-VFGYLGMVYAMISIGVLGFLVWAHHMFTVGLDVDTRAYFT 308
Query: 365 SATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDIT 544
+AT+IIAVPTGIKIF +AT+ G I Y +L +GF+FLFT+GGLTG++LANS +DI
Sbjct: 309 AATMIIAVPTGIKIFSWIATMWGGSIQYKTPMLFAVGFIFLFTIGGLTGIVLANSGLDIA 368
Query: 545 LHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVNITFF 724
LHDTYYVVAHFHYVLS G + + +I F+ F GVN+TFF
Sbjct: 369 LHDTYYVVAHFHYVLSMGAVFALFAGFYYWVGKIFGRTYPETLGQIHFWITFFGVNLTFF 428
Query: 725 PQHFLGLAGIPRRYSDYPDSYIS*NIIXSLG 817
P HFLGL+G+PRR DYPD+Y N + S G
Sbjct: 429 PMHFLGLSGMPRRIPDYPDAYAGWNALSSFG 459
>UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Chondrus crispus (Carragheen)
Length = 532
Score = 317 bits (778), Expect = 3e-85
Identities = 155/268 (57%), Positives = 186/268 (69%)
Frame = +2
Query: 14 ITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILP 193
+TAF AGAIT+LLTDRN NTSFFD +GGGDPILYQHLF FFGHPEVYILILP
Sbjct: 198 VTAFLLLLAVPVLAGAITMLLTDRNFNTSFFDASGGGDPILYQHLFWFFGHPEVYILILP 257
Query: 194 GFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSAT 373
GFG+ISHI+S +K F FIV AHH++TVG+D+DTRAYFT+AT
Sbjct: 258 GFGMISHIVSTF-SRKPVFGYIGMVYAMVSIGVLGFIVWAHHMYTVGLDVDTRAYFTAAT 316
Query: 374 IIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHD 553
+IIAVPTGIKIF +ATI I+ +L +GF+FLFT+GGLTG++LANS +DI+LHD
Sbjct: 317 MIIAVPTGIKIFSWIATIWEGSIHLKTPMLFAIGFIFLFTIGGLTGIVLANSGLDISLHD 376
Query: 554 TYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQH 733
TYYVVAHFHYVLS + TGL + +I F++ FIGVN+TF P H
Sbjct: 377 TYYVVAHFHYVLSMGAVFAIFAGFYYWFGKITGLQYPETLGQIHFWSTFIGVNLTFMPMH 436
Query: 734 FLGLAGIPRRYSDYPDSYIS*NIIXSLG 817
FLGLAG+PRR DYPD+Y N+I S G
Sbjct: 437 FLGLAGMPRRIPDYPDAYAGWNLIASYG 464
>UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2
polyprotein; n=1; Phaeosphaeria nodorum SN15|Rep:
Cytochrome oxidase subunits 1 and 2 polyprotein -
Phaeosphaeria nodorum SN15
Length = 789
Score = 315 bits (774), Expect = 8e-85
Identities = 154/271 (56%), Positives = 185/271 (68%)
Frame = +2
Query: 5 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYIL 184
AV ITA AG IT++LTDRN NTSFF+ AGGGDPILYQHLF FFGHPEVYIL
Sbjct: 188 AVVITAVLLLLSLPVLAGGITMVLTDRNFNTSFFEVAGGGDPILYQHLFWFFGHPEVYIL 247
Query: 185 ILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFT 364
I+PGFGIIS IS K F F+V +HH++TVG+D+DTRAYFT
Sbjct: 248 IIPGFGIISTTISAN-SNKSVFGYLGMVYAMCSIGILGFVVWSHHMYTVGLDVDTRAYFT 306
Query: 365 SATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDIT 544
+AT+IIAVPTGIKIF LAT +G +++ P++L LGFVF+FT+GGL+GV+LAN+S+DI
Sbjct: 307 AATLIIAVPTGIKIFSWLATCYGGSLHFIPSLLFALGFVFMFTIGGLSGVVLANASLDIA 366
Query: 545 LHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVNITFF 724
HDTYYVVAHFHYVLS P GL N K F+ +F GVN+TFF
Sbjct: 367 FHDTYYVVAHFHYVLSMGAVFALFSGWYFWIPKILGLDYNLLYSKAHFWVLFTGVNLTFF 426
Query: 725 PQHFLGLAGIPRRYSDYPDSYIS*NIIXSLG 817
PQHFLGL G+PRR SDYPD++ N I S+G
Sbjct: 427 PQHFLGLQGMPRRISDYPDAFTGWNFISSIG 457
>UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Paracoccidioides brasiliensis
Length = 710
Score = 307 bits (753), Expect = 3e-82
Identities = 152/271 (56%), Positives = 186/271 (68%)
Frame = +2
Query: 5 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYIL 184
AV ITA A AIT+LLTDRNLNTSF++ AGGGD ILYQHLF FFGHPEVYIL
Sbjct: 214 AVVITAVLLLLSLPVLAAAITMLLTDRNLNTSFYELAGGGDAILYQHLFWFFGHPEVYIL 273
Query: 185 ILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFT 364
I+PGFGIIS +IS K F FIV +HH++TVG+D+DTRAYFT
Sbjct: 274 IIPGFGIISTVISAN-SNKNVFGYLGMVYAMMSIGLLGFIVWSHHMYTVGLDVDTRAYFT 332
Query: 365 SATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDIT 544
+AT+IIA+PTG+KIF LAT +G +++ +L LGFV +FT+GGL+GV+LAN+S +I
Sbjct: 333 AATLIIAIPTGVKIFSWLATCYGGSLHFTTPMLFALGFVVMFTIGGLSGVVLANASENIA 392
Query: 545 LHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVNITFF 724
HDTYYVVAHFHYVLS P GLS ++ KI F+ +FIGVN+TFF
Sbjct: 393 FHDTYYVVAHFHYVLSMGAVFALFSGWYFWIPKIIGLSYDTKASKIHFWILFIGVNLTFF 452
Query: 725 PQHFLGLAGIPRRYSDYPDSYIS*NIIXSLG 817
PQHFLGL G+PRR SDYPD++ N+I S G
Sbjct: 453 PQHFLGLQGMPRRISDYPDAFEGWNLISSFG 483
>UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3;
Alphaproteobacteria|Rep: Cytochrome-c oxidase -
Sphingomonas sp. SKA58
Length = 556
Score = 290 bits (712), Expect = 3e-77
Identities = 140/271 (51%), Positives = 179/271 (66%)
Frame = +2
Query: 5 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYIL 184
+V +TAF A AIT+LLTDRN T+F+D AGGGDP LYQHLF FFGHPEVYI+
Sbjct: 230 SVLVTAFLLLLALPVLAAAITMLLTDRNFGTTFYDAAGGGDPELYQHLFWFFGHPEVYIM 289
Query: 185 ILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFT 364
ILPGFGIIS I+S +K F F+V AHH+FT G+ ++ + YFT
Sbjct: 290 ILPGFGIISQIVSTF-SRKPVFGYLGMAYAMVAIGVVGFVVWAHHMFTTGMSVNVKMYFT 348
Query: 365 SATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDIT 544
+AT++IAVPTGIKIF +ATI G I++ ++ LGF+FLFTVGG+TGV+LAN +D
Sbjct: 349 AATMVIAVPTGIKIFSWIATIWGGSISFKTPMVWALGFIFLFTVGGVTGVVLANGGVDDV 408
Query: 545 LHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVNITFF 724
LHDTYYVVAHFHYVLS +P +G N ++ ++ F+ F GVN+ FF
Sbjct: 409 LHDTYYVVAHFHYVLSLGAVFGLFAGFYYWFPKMSGKMYNEFLGQLHFWVFFAGVNLLFF 468
Query: 725 PQHFLGLAGIPRRYSDYPDSYIS*NIIXSLG 817
P HFLGL+G+PRRY DYP+++ N I S G
Sbjct: 469 PMHFLGLSGMPRRYPDYPEAFAYWNGIASHG 499
>UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181;
Coelomata|Rep: Cytochrome c oxidase subunit I - Piculus
rubiginosus
Length = 504
Score = 287 bits (703), Expect = 3e-76
Identities = 144/271 (53%), Positives = 168/271 (61%)
Frame = +2
Query: 5 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYIL 184
+V ITA A IT+LLTDRNLNT+FFDPAGGGDPILYQHLF FFGHPEVYIL
Sbjct: 188 SVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYIL 247
Query: 185 ILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFT 364
ILPGFG+ISH+++ GKKE F FIV A
Sbjct: 248 ILPGFGMISHVVTYYAGKKEPFGYMGMVWAMLSIGFLGFIVWAXXXXXXXXXXXXXXXXX 307
Query: 365 SATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDIT 544
LAT+HG I ++P +L LGF+FLFTVGGLTG++LANSS+DI
Sbjct: 308 XXXXXXXXXXXXXXXXWLATLHGGTIKWDPPMLWALGFIFLFTVGGLTGIVLANSSLDIA 367
Query: 545 LHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVNITFF 724
LHDTYYVVAHFHYVLS + +PLFTG +LNS K F +F GVN+TFF
Sbjct: 368 LHDTYYVVAHFHYVLSMGAVFAILAGFTHWFPLFTGYTLNSAWAKAHFGVMFTGVNLTFF 427
Query: 725 PQHFLGLAGIPRRYSDYPDSYIS*NIIXSLG 817
PQHFLGLAG+PRRYSDYPD+Y N + S+G
Sbjct: 428 PQHFLGLAGMPRRYSDYPDAYTLWNTMSSIG 458
>UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1;
Naegleria gruberi|Rep: Cytochrome c oxidase subunit 1 -
Naegleria gruberi
Length = 633
Score = 281 bits (690), Expect = 1e-74
Identities = 140/272 (51%), Positives = 174/272 (63%), Gaps = 1/272 (0%)
Frame = +2
Query: 5 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYIL 184
+V +T+F A AIT+LL DRN NTSF+DP GGGD +LYQHLF FFGHPEVYIL
Sbjct: 191 SVAVTSFLVIVAIPVLAAAITLLLFDRNFNTSFYDPVGGGDVVLYQHLFWFFGHPEVYIL 250
Query: 185 ILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFT 364
ILPGFG++SHII+ KK F FIV AHH++T GID T+AYFT
Sbjct: 251 ILPGFGLVSHIIA-TFSKKRVFGHVPMIAAMLMIGLIGFIVWAHHMYTSGIDTSTKAYFT 309
Query: 365 SATIIIAVPTGIKIFR*LATIHGTQI-NYNPNIL*RLGFVFLFTVGGLTGVILANSSIDI 541
+AT++IA+PTGIK+F +AT+ G I Y P GFV LFT+GG+TG+IL+N+ ID
Sbjct: 310 AATMVIAIPTGIKVFNWIATMWGGSIWMYTPMYF-AAGFVVLFTIGGITGIILSNAGIDT 368
Query: 542 TLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVNITF 721
++HDT+YVV HFHYVLS + TGLS + + + F+ FIGVN TF
Sbjct: 369 SIHDTHYVVGHFHYVLSMGAVFAIYGGFYYWWGKMTGLSYSESLGQAHFWMTFIGVNFTF 428
Query: 722 FPQHFLGLAGIPRRYSDYPDSYIS*NIIXSLG 817
FP HFLG G+PRR DYPD Y N + S G
Sbjct: 429 FPMHFLGSGGMPRRIPDYPDMYQYHNTLASFG 460
>UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular
organisms|Rep: Cytochrome-c oxidase - Jannaschia sp.
(strain CCS1)
Length = 628
Score = 276 bits (677), Expect = 5e-73
Identities = 133/271 (49%), Positives = 175/271 (64%)
Frame = +2
Query: 5 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYIL 184
+V +TA+ AGAIT+LLTDRN T+FFDPAGGGDPIL+QH+F FFGHPEVYI+
Sbjct: 293 SVFVTAWLLLLSLPVLAGAITMLLTDRNFGTTFFDPAGGGDPILFQHIFWFFGHPEVYIV 352
Query: 185 ILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFT 364
ILP FG+ISHI++ KK F F+V AHH++TVG+ + +AYF
Sbjct: 353 ILPAFGVISHIVATF-SKKPIFGYLPMVYALVAIGGLGFVVWAHHMYTVGMTLTQQAYFM 411
Query: 365 SATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDIT 544
AT++IAVPTGIKIF +AT+ I++ ++ LGF+FLFT+GG TG+IL+ + +D
Sbjct: 412 VATMVIAVPTGIKIFSWIATMWMGSISFKTPMMFALGFIFLFTLGGTTGIILSQAGVDRA 471
Query: 545 LHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVNITFF 724
HDTYYVVAHFHYV+S +G + ++ F+ FIG NITFF
Sbjct: 472 YHDTYYVVAHFHYVMSLGAVFGIFAAVYYWIGKMSGRQYPEWAGQVHFWVFFIGTNITFF 531
Query: 725 PQHFLGLAGIPRRYSDYPDSYIS*NIIXSLG 817
PQHFLG G+PRRY DYPD++ N + S+G
Sbjct: 532 PQHFLGRQGMPRRYIDYPDAFALWNYVSSIG 562
>UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9;
Coelomata|Rep: Cytochrome c oxidase subunit I - Lingula
unguis
Length = 573
Score = 270 bits (662), Expect = 3e-71
Identities = 130/258 (50%), Positives = 167/258 (64%), Gaps = 3/258 (1%)
Frame = +2
Query: 53 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQER 232
A +T+LL DR+ +TSF+ P GGGDPIL+QHLF FFGHPEVYILILP FG+ISHI+ +
Sbjct: 206 AAGLTLLLLDRHFSTSFYYPEGGGDPILWQHLFWFFGHPEVYILILPAFGVISHILCRSS 265
Query: 233 GKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR 412
K F F+V HH+F G+DIDTRAYFT+AT++IAVPTG+K+F
Sbjct: 266 AKLHVFGKIGMSWASMGIAWMGFLVWGHHMFVAGLDIDTRAYFTAATLMIAVPTGVKVFN 325
Query: 413 *LATIHG---TQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHY 583
LATI G + + +P+ +G V LFT+GGLTGVILAN+++ LHD+YYVVAHFHY
Sbjct: 326 WLATIFGGVYSLKHSHPSTFWAIGVVLLFTIGGLTGVILANAALSTLLHDSYYVVAHFHY 385
Query: 584 VLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRR 763
VLS +P +TG+ ++ F FIGVN TFFP H++GL G+PRR
Sbjct: 386 VLSMGAVFAIFGGFWFWFPFWTGMVPRKDLVLTHFMLTFIGVNFTFFPMHWMGLTGMPRR 445
Query: 764 YSDYPDSYIS*NIIXSLG 817
Y DYPD + I + G
Sbjct: 446 YQDYPDIHSVWQAISTTG 463
>UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42;
Nematoda|Rep: Cytochrome c oxidase subunit I - Onchocerca
volvulus
Length = 548
Score = 256 bits (627), Expect = 5e-67
Identities = 125/268 (46%), Positives = 160/268 (59%)
Frame = +2
Query: 14 ITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILP 193
+T+F AG++ LL DRN NTSF+D GG+P+LYQHLF FFGHPEVY++ILP
Sbjct: 200 LTSFLLVLSVPVLAGSLLFLLLDRNFNTSFYDTKKGGNPLLYQHLFWFFGHPEVYVIILP 259
Query: 194 GFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSAT 373
FGIIS + K F V HH++T G+DIDTR YF++AT
Sbjct: 260 VFGIISEAVLFLTDKDRLFGQTSMTFASIWIAVLGTSVWGHHMYTAGLDIDTRTYFSAAT 319
Query: 374 IIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHD 553
+IIA+P+ +KIF L T G+ P F+FLFTVGGL+G+IL+ +S+DI LHD
Sbjct: 320 MIIAIPSAVKIFNWLGTFFGSNQKMQPLWCWTYSFIFLFTVGGLSGIILSAASLDIILHD 379
Query: 554 TYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQH 733
TYYVVAHFHY LS P G+S +S ++ F F+G N+TFFP H
Sbjct: 380 TYYVVAHFHYTLSLGAIYGIFCGFCLWLPYMYGISFDSVMMMAVFVCFFVGTNMTFFPMH 439
Query: 734 FLGLAGIPRRYSDYPDSYIS*NIIXSLG 817
F GL G+PR+ DYPD Y + II SLG
Sbjct: 440 FAGLQGMPRKILDYPDCYSTFQIISSLG 467
>UniRef50_Q6TP93 Cluster: Cytochrome c oxidase subunit I; n=2;
Bruchidius|Rep: Cytochrome c oxidase subunit I -
Bruchidius aff. varius GLK-2003
Length = 339
Score = 255 bits (625), Expect = 9e-67
Identities = 124/185 (67%), Positives = 140/185 (75%)
Frame = +2
Query: 170 EVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDT 349
EVYILILPGFG+ISHIISQE GKKE F F+V AHH+FTVG+D+DT
Sbjct: 155 EVYILILPGFGMISHIISQESGKKEAFGTLGMIYAMMAIGLLGFVVWAHHMFTVGMDVDT 214
Query: 350 RAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANS 529
RAYFTSAT+IIAVPTGIK+F LAT HGTQI Y+P L LGFVFLFTVGGLTGV+LANS
Sbjct: 215 RAYFTSATMIIAVPTGIKVFSWLATFHGTQILYSPVTLWTLGFVFLFTVGGLTGVVLANS 274
Query: 530 SIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGV 709
SIDI LHDTYYVVAHFHYVLS +PLFTG++LN++ LKIQF +FIGV
Sbjct: 275 SIDIVLHDTYYVVAHFHYVLSMGAVFAIMAGIVQWFPLFTGVTLNNFFLKIQFIIMFIGV 334
Query: 710 NITFF 724
N+TFF
Sbjct: 335 NLTFF 339
>UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7;
Echinoida|Rep: Cytochrome c oxidase subunit I -
Echinometra oblonga
Length = 386
Score = 248 bits (606), Expect = 2e-64
Identities = 114/193 (59%), Positives = 142/193 (73%)
Frame = +2
Query: 86 NLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXX 265
N T+FFDPAGGGD IL+QHLF FFGHPEVYILILPGFG+ISH+I+ GK+E F
Sbjct: 191 NYYTTFFDPAGGGDXILFQHLFXFFGHPEVYILILPGFGMISHVIAHYSGKREPFGYLGM 250
Query: 266 XXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQIN 445
F+V AHH+FTVG+D+DTRAYFT+AT+IIAVPTGIK+F +AT+ G+ +
Sbjct: 251 VYAMIAIGVLGFLVWAHHMFTVGMDVDTRAYFTAATMIIAVPTGIKVFSWMATLQGSNLQ 310
Query: 446 YNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXX 625
+ + LGFVFLFT+GGLTG++LANSSID+ LHDTYYVVAHFHYVLS
Sbjct: 311 WETPLFWALGFVFLFTLGGLTGIVLANSSIDVVLHDTYYVVAHFHYVLSMGAVFAIFAGF 370
Query: 626 XN*YPLFTGLSLN 664
+ +PLF+G +L+
Sbjct: 371 THWFPLFSGYNLH 383
>UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Schistosoma mansoni (Blood fluke)
Length = 609
Score = 247 bits (604), Expect = 3e-64
Identities = 120/256 (46%), Positives = 158/256 (61%), Gaps = 1/256 (0%)
Frame = +2
Query: 53 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQER 232
A IT+LL DRN T+FF+P+GGGDPIL+QHLF FFGHPEVY+LILPGFGI+SHI
Sbjct: 293 ASGITMLLFDRNFGTAFFEPSGGGDPILFQHLFWFFGHPEVYVLILPGFGIVSHICMSLS 352
Query: 233 GKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR 412
+F +V HH+F VG D T +F+S T+II VPTGIK+F
Sbjct: 353 NNDSSFGYYGLICAMASIVCLGSVVWGHHMFMVGFDSLTGVFFSSITMIIGVPTGIKVFS 412
Query: 413 *LATIHGTQIN-YNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVL 589
L ++ + +P + +GF+FLFTVGG+TGV L+ S++DI HDT++VVAHFHYVL
Sbjct: 413 WLYMLNSCGMRVLDPIVWWLVGFIFLFTVGGVTGVALSASALDILFHDTWFVVAHFHYVL 472
Query: 590 SXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYS 769
S +P G SLN Y+L+ + +G N+ FFP H+LG+ G+PRR S
Sbjct: 473 SLGSYSSIVIMLVWWWPFIVGYSLNKYLLQGHWLLSMVGFNLCFFPMHYLGIHGLPRRVS 532
Query: 770 DYPDSYIS*NIIXSLG 817
Y Y N+I S+G
Sbjct: 533 CYDQEYYWVNVISSIG 548
>UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107;
Alveolata|Rep: Cytochrome c oxidase subunit 1 -
Plasmodium falciparum
Length = 476
Score = 230 bits (562), Expect = 4e-59
Identities = 117/256 (45%), Positives = 154/256 (60%), Gaps = 2/256 (0%)
Frame = +2
Query: 56 GAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERG 235
G + +LL+D + NT FFDP GDPILYQHLF FFGHPEVYILILP FG+ISH+IS
Sbjct: 210 GGVLMLLSDLHFNTLFFDPTFAGDPILYQHLFWFFGHPEVYILILPAFGVISHVISTNY- 268
Query: 236 KKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR* 415
+ F +V HH++T G+++DTRAYFTS TI+I++PTG K+F
Sbjct: 269 CRNLFGNQSMILAMGCIAVLGSLVWVHHMYTTGLEVDTRAYFTSTTILISIPTGTKVFNW 328
Query: 416 LATIHGTQIN-YNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLS 592
+ T + + + L L F+ FT GG TGVIL N++ID+ LHDTYYV+AHFH+VLS
Sbjct: 329 ICTYMSSNFGMIHSSSLLSLLFICTFTFGGTTGVILGNAAIDVALHDTYYVIAHFHFVLS 388
Query: 593 XXXXXXXXXXXXN*YPLFTGLSL-NSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYS 769
F G +L + I+ + F+GV +TF P HFLG +PRR
Sbjct: 389 IGAIIGLFTTVSAFQDNFFGKNLRENSIVILWSMLFFVGVILTFLPMHFLGFNVMPRRIP 448
Query: 770 DYPDSYIS*NIIXSLG 817
DYPD+ N+I S+G
Sbjct: 449 DYPDALNGWNMICSIG 464
>UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI8
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI8 (EC
3.1.-.-)]; n=103; Eukaryota|Rep: Probable intron-encoded
endonuclease aI8 precursor [Contains: Truncated
non-functional cytochrome oxidase 1; Intron-encoded
endonuclease aI8 (EC 3.1.-.-)] - Ustilago maydis (Smut
fungus)
Length = 645
Score = 227 bits (556), Expect = 2e-58
Identities = 109/186 (58%), Positives = 134/186 (72%)
Frame = +2
Query: 5 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYIL 184
A+ +TA AGAIT+LLTDRN NTSF+DPAGGGDPILYQHLF FFGHPEVYIL
Sbjct: 187 AIFVTAILLLLSLPVLAGAITMLLTDRNFNTSFYDPAGGGDPILYQHLFWFFGHPEVYIL 246
Query: 185 ILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFT 364
I+PGFG++SHI+S G K F F+V +HH++ VG+D+DTRAYFT
Sbjct: 247 IIPGFGMVSHIVSAFSG-KPVFGYLGMVYAMFSIGILGFLVWSHHMYAVGLDVDTRAYFT 305
Query: 365 SATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDIT 544
+AT+IIAVPTGIKIF LAT++G + +L LGF+ LFT+GGLTGVILAN+S+D+
Sbjct: 306 AATMIIAVPTGIKIFSWLATLYGGSLRITTPMLFALGFIALFTIGGLTGVILANASLDVA 365
Query: 545 LHDTYY 562
LHD Y
Sbjct: 366 LHDLKY 371
>UniRef50_P29649 Cluster: Cytochrome c oxidase subunit 1; n=441;
Bilateria|Rep: Cytochrome c oxidase subunit 1 - Pantodon
buchholtzi (Butterflyfish)
Length = 184
Score = 224 bits (548), Expect = 2e-57
Identities = 107/183 (58%), Positives = 132/183 (72%)
Frame = +2
Query: 155 FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVG 334
FFGHPEVYILILPGFG+ISHI++ GKKE F FIV AHH+FTVG
Sbjct: 2 FFGHPEVYILILPGFGMISHIVAYYSGKKEPFGYMGMVWAMMAIGLLGFIVWAHHMFTVG 61
Query: 335 IDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGV 514
+D+DTRAYFTSAT+IIA+PTG+K+F LAT+HG I ++ +L LGF+FLFTVGGLTG+
Sbjct: 62 MDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGSIKWDTPMLWALGFIFLFTVGGLTGI 121
Query: 515 ILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFT 694
ILANSS+DI LHDTYYVVAHFHYVLS + +PLF+G +L++ KI F
Sbjct: 122 ILANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLHNTWTKIHFGV 181
Query: 695 IFI 703
+F+
Sbjct: 182 MFM 184
>UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7;
Eukaryota|Rep: Cytochrome c oxidase subunit 1 -
Leishmania tarentolae (Sauroleishmania tarentolae)
Length = 549
Score = 215 bits (524), Expect = 2e-54
Identities = 110/261 (42%), Positives = 153/261 (58%), Gaps = 2/261 (0%)
Frame = +2
Query: 14 ITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILP 193
ITA AG +T++L DRN NTSF+D GGGD IL+QH+F FFGHPEVYI++LP
Sbjct: 193 ITAILLIITLPVLAGGVTLILCDRNFNTSFYDVVGGGDLILFQHIFWFFGHPEVYIILLP 252
Query: 194 GFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSAT 373
FG+IS I+ + G + F V AHH+F VG+D+D+RAYF +
Sbjct: 253 VFGLISTIV-EVIGFRCVFSTVAMIYSMILIAILGMFVWAHHMFVVGMDVDSRAYFGGVS 311
Query: 374 IIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHD 553
I+I +PT +K+F + + T + + + F+F+F +G +TG+ L+N IDI LHD
Sbjct: 312 ILIGLPTCVKLFNWIYSFLYTDMIITFEVYFVIMFIFMFLIGAVTGLFLSNVGIDIMLHD 371
Query: 554 TYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFF--TIFIGVNITFFP 727
TY+VV HFHYVLS + L L + Y+ + +F T+FIG N+ FFP
Sbjct: 372 TYFVVGHFHYVLSLGAVVGFFTGFI--HFLAKWLPIELYLFWMFYFISTLFIGSNMLFFP 429
Query: 728 QHFLGLAGIPRRYSDYPDSYI 790
H LG+ PRR SDYP S++
Sbjct: 430 MHSLGMYAFPRRISDYPVSFL 450
>UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388;
Coelomata|Rep: Cytochrome c oxidase subunit I - Picoides
borealis
Length = 513
Score = 212 bits (518), Expect = 9e-54
Identities = 100/163 (61%), Positives = 121/163 (74%)
Frame = +2
Query: 329 VGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLT 508
VG+ + RAYFTSAT+IIA+PTGIK F LAT G I ++P +L LGF+FLFTVGGLT
Sbjct: 296 VGMXVXPRAYFTSATMIIAIPTGIKAFSWLATXXGGTIKWDPPMLWALGFIFLFTVGGLT 355
Query: 509 GVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQF 688
G++LANSS+DI LHDTYYVVAHFHYVLS + +PLFTG +LN+ K F
Sbjct: 356 GIVLANSSLDIALHDTYYVVAHFHYVLSMGAVFAILAGFTHWFPLFTGYTLNNAWAKAHF 415
Query: 689 FTIFIGVNITFFPQHFLGLAGIPRRYSDYPDSYIS*NIIXSLG 817
+F GVN+TFFPQHFLGLAG+PRRYSDYPD+Y N + S+G
Sbjct: 416 GVMFTGVNLTFFPQHFLGLAGMPRRYSDYPDAYTLWNTMSSIG 458
>UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa
group|Rep: Endonuclease - Saccharomyces servazzii
(Yeast)
Length = 675
Score = 212 bits (517), Expect = 1e-53
Identities = 103/183 (56%), Positives = 126/183 (68%)
Frame = +2
Query: 5 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYIL 184
A+ ITAF + IT+LL DRN NTSFF+ AGGGDPI YQH F FFGHPEVYIL
Sbjct: 188 AIFITAFLLLLSLPVLSAGITMLLMDRNFNTSFFEVAGGGDPIFYQHAFWFFGHPEVYIL 247
Query: 185 ILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFT 364
I+PGFGI+SHI+S KK F F+V +HH++ VG+D DTRAYFT
Sbjct: 248 IIPGFGIVSHIVSTY-SKKPVFGEISMVYAMASIGLLGFLVWSHHMYIVGLDADTRAYFT 306
Query: 365 SATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDIT 544
SAT+IIA+PTGIKIF LATI+G I ++ + F+FLFTVGGLTGV+LAN+S+D+
Sbjct: 307 SATMIIAIPTGIKIFSWLATIYGGSIRLAVPMMFAIAFLFLFTVGGLTGVVLANASLDVA 366
Query: 545 LHD 553
HD
Sbjct: 367 FHD 369
>UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1);
n=59; Cyanobacteria|Rep: Cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1) -
Synechocystis sp. (strain PCC 6803)
Length = 551
Score = 212 bits (517), Expect = 1e-53
Identities = 107/255 (41%), Positives = 147/255 (57%)
Frame = +2
Query: 53 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQER 232
A A+ +L D TSFF+P GGGDP++YQHLF F+ HP VYI+ILP FG+IS +I
Sbjct: 214 ASALILLSFDLIAGTSFFNPVGGGDPVVYQHLFWFYSHPAVYIMILPFFGVISEVIPVH- 272
Query: 233 GKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR 412
+K F IV AHH+FT G R +F + T++IAVPTGIKIF
Sbjct: 273 ARKPIFGYRAIAYSSLAISFLGLIVWAHHMFTSGTPGWLRMFFMATTMLIAVPTGIKIFS 332
Query: 413 *LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLS 592
T+ G +I N +L GF+ F +GGLTGV++A+ DI +HDTY+VV HFHYVL
Sbjct: 333 WCGTLWGGKIQLNSAMLFAFGFLSSFMIGGLTGVMVASVPFDIHVHDTYFVVGHFHYVLF 392
Query: 593 XXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSD 772
+ +P TG +N + ++ F FIG+N+TF P H LGL G+ RR +
Sbjct: 393 GGSAFALFSGVYHWFPKMTGRMVNEPLGRLHFILTFIGMNLTFMPMHELGLMGMNRRIAL 452
Query: 773 YPDSYIS*NIIXSLG 817
Y + N++ ++G
Sbjct: 453 YDVEFQPLNVLSTIG 467
>UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Placozoan sp. BZ2423
Length = 498
Score = 205 bits (500), Expect = 1e-51
Identities = 100/175 (57%), Positives = 125/175 (71%), Gaps = 2/175 (1%)
Frame = +2
Query: 299 FIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQIN--YNPNIL*RL 472
FIV A H++ VG+D+DTRAYFT+AT+IIAVPTGIKIF LAT+ G+ N + + L
Sbjct: 250 FIVWADHMYVVGMDVDTRAYFTAATMIIAVPTGIKIFSWLATVSGSGRNLIFTTPMAWAL 309
Query: 473 GFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTG 652
GF+FLFT+GGLTG++L+NSS+DI LHDTYYVVAHFHYVLS + TG
Sbjct: 310 GFIFLFTIGGLTGIVLSNSSLDILLHDTYYVVAHFHYVLSMGAVFAIFGGFYLWFGKITG 369
Query: 653 LSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYPDSYIS*NIIXSLG 817
+ I F+ +F+GVNITFFPQHFLGLAG+PRRY+DYPD++ N I S G
Sbjct: 370 YAYKDIYGLIHFWLMFLGVNITFFPQHFLGLAGLPRRYADYPDNFEDFNQISSFG 424
Score = 74.5 bits (175), Expect = 3e-12
Identities = 36/53 (67%), Positives = 39/53 (73%)
Frame = +2
Query: 5 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 163
+V ITA AGAIT+LLTDR NT+FFDPAGGGDPILYQHLF FFG
Sbjct: 188 SVLITAILLLLSLPVLAGAITMLLTDRYFNTTFFDPAGGGDPILYQHLFWFFG 240
>UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida
stellata|Rep: Cox1-i5 protein - Candida stellata (Yeast)
Length = 763
Score = 205 bits (500), Expect = 1e-51
Identities = 99/189 (52%), Positives = 129/189 (68%)
Frame = +2
Query: 5 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYIL 184
+V ITA A +T+LL DRN NTSFF +GGGDP+LY+H+F FFGHPEVYIL
Sbjct: 205 SVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPLLYEHIFWFFGHPEVYIL 264
Query: 185 ILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFT 364
I+P FG++S I+ Q KK F F V +HH+FTVG+D D+RAYF+
Sbjct: 265 IVPVFGVVSQIV-QVYAKKPIFGKIGMIYAMASIGFLGFCVWSHHMFTVGLDADSRAYFS 323
Query: 365 SATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDIT 544
A++IIA+PTG KIF LATI+G + + +L +GF+ LFT+GG+TGV++ANSS+DI
Sbjct: 324 GASLIIAIPTGSKIFSWLATIYGGTLRWTTPLLYAVGFIVLFTIGGVTGVVIANSSLDIM 383
Query: 545 LHDTYYVVA 571
HDTYYVVA
Sbjct: 384 FHDTYYVVA 392
>UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3;
Bacteria|Rep: Cytochrome caa3 oxidase - Planctomyces
maris DSM 8797
Length = 754
Score = 204 bits (498), Expect = 2e-51
Identities = 103/242 (42%), Positives = 141/242 (58%)
Frame = +2
Query: 59 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGK 238
A+ +LL DR L ++FFDP GG +L+QH F FGHPEVYILILPGFG+IS +I +
Sbjct: 224 ALAMLLIDRWLGSAFFDPTRGGSAVLWQHYFWIFGHPEVYILILPGFGMISEVIPVF-SR 282
Query: 239 KETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*L 418
K + + V AHH+F VG+ + +F +++IA+PTGIK+F
Sbjct: 283 KPIYGYTFVAASSVAIVLLGYGVWAHHMFAVGLGMYADIFFAVGSLLIAIPTGIKVFNWT 342
Query: 419 ATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXX 598
AT+ G +I +N ++ + F+ F +GGLTG++ A ID L DTY+VVAHFHYVL
Sbjct: 343 ATLWGGEIQFNTSLHFAVAFLLQFVIGGLTGIMFAAVPIDWQLTDTYFVVAHFHYVLIGG 402
Query: 599 XXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYP 778
+P TG LN I +QF+ +G N+TF QHFLGL G+PRR Y
Sbjct: 403 LVFALFSAAYYWFPKMTGRMLNERIGILQFWLWVLGFNMTFMVQHFLGLMGMPRRVYTYA 462
Query: 779 DS 784
D+
Sbjct: 463 DN 464
>UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase, subunit
I; n=2; Halobacteriaceae|Rep: Cytochrome-c-like terminal
oxidase, subunit I - Haloquadratum walsbyi (strain DSM
16790)
Length = 634
Score = 197 bits (481), Expect = 3e-49
Identities = 105/253 (41%), Positives = 143/253 (56%)
Frame = +2
Query: 59 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGK 238
AI +LL DRN TSFF AG G IL+QHLF FFGHPEVYI++LP GIIS+I+ + G+
Sbjct: 292 AIMMLLFDRNFGTSFF--AGEGGAILWQHLFWFFGHPEVYIIVLPPMGIISYILPRFSGR 349
Query: 239 KETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*L 418
+ F F V AHH+F G+D RA F + ++ IAVP+ +K F +
Sbjct: 350 R-LFGFKFVVYSTLAIGVLSFGVWAHHMFATGLDPRLRASFMAVSLAIAVPSAVKTFNWI 408
Query: 419 ATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXX 598
T+ I +L +GFV F +GG+TGV LA+ +D+ LH TYYVV HFHY++
Sbjct: 409 TTMWNGNIRLTTPMLFSVGFVANFILGGVTGVFLASIPVDLVLHATYYVVGHFHYIVMGA 468
Query: 599 XXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYP 778
+PL+TG + K+ F+ IG NITFF LG G+PRRY+ Y
Sbjct: 469 IAFAGFAGIYYWFPLYTGRMYQRTLGKMHFWLSMIGTNITFFAMILLGYGGMPRRYATYL 528
Query: 779 DSYIS*NIIXSLG 817
+ + + I +LG
Sbjct: 529 PQFATLHQITTLG 541
>UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2;
Roseiflexus|Rep: Cytochrome-c oxidase - Roseiflexus sp.
RS-1
Length = 641
Score = 197 bits (480), Expect = 4e-49
Identities = 102/235 (43%), Positives = 137/235 (58%)
Frame = +2
Query: 71 LLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETF 250
LL DR+ T FF P GGD +L+QHLF FFGHPEVYILILP GIIS ++ +K F
Sbjct: 227 LLFDRHFGTRFFLPNLGGDAVLWQHLFWFFGHPEVYILILPTMGIISEVLPTF-SRKPIF 285
Query: 251 XXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIH 430
F+V AHH+F VG+ A+F +A+ +IAVPTG+KIF LAT+
Sbjct: 286 GYAFVAYSGVAIGFLGFLVWAHHMFAVGLGPLANAFFGAASFLIAVPTGVKIFNWLATMW 345
Query: 431 GTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXX 610
+N ++L +GF+ +F +GG++GV LA+ I++ D+YYVVAH HYVL
Sbjct: 346 QGSLNLTTSMLYAIGFISMFIIGGISGVTLASPPINVQQTDSYYVVAHMHYVLFGGAIQG 405
Query: 611 XXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDY 775
+P TG L+ + K QF+ + I N+TFFP H G AG+PRR Y
Sbjct: 406 IFAGIFYWFPKMTGRMLDERLGKWQFWLMLISFNLTFFPMHLSGNAGMPRRIYTY 460
>UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Caa-3605 subunit 1) (Oxidase
aa(3) subunit 1); n=13; Bacillaceae|Rep: Cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c oxidase
polypeptide I) (Cytochrome aa3 subunit 1) (Caa-3605
subunit 1) (Oxidase aa(3) subunit 1) - Bacillus subtilis
Length = 622
Score = 197 bits (480), Expect = 4e-49
Identities = 104/254 (40%), Positives = 146/254 (57%), Gaps = 2/254 (0%)
Frame = +2
Query: 62 ITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKK 241
+ +++ DR T+FF+P GG+ ++++HLF FGHPEVYILILP FGI S +I +K
Sbjct: 215 LALMMLDRLFGTNFFNPELGGNTVIWEHLFWIFGHPEVYILILPAFGIFSEVIPVF-ARK 273
Query: 242 ETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LA 421
F F+V HH+FT G+ A F AT+ IA+PTGIKIF L
Sbjct: 274 RLFGYSSMVFAIVLIGFLGFMVWVHHMFTTGLGPIANAIFAVATMAIAIPTGIKIFNWLL 333
Query: 422 TIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXX 601
TI G + Y +L + F+ F +GG+TGV+LA ++ D HDTY+VVAHFHYV+
Sbjct: 334 TIWGGNVKYTTAMLYAVSFIPSFVLGGVTGVMLAAAAADYQFHDTYFVVAHFHYVIIGGV 393
Query: 602 XXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRR-YSDYP 778
+P G L+ + KI F FIG ++TFF QHF+GL G+PRR Y+ P
Sbjct: 394 VFGLLAGVHFWWPKMFGKILHETMGKISFVLFFIGFHLTFFIQHFVGLMGMPRRVYTFLP 453
Query: 779 DSYI-S*NIIXSLG 817
+ + N+I ++G
Sbjct: 454 GQGLETGNLISTIG 467
>UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 485
Score = 195 bits (476), Expect = 1e-48
Identities = 98/242 (40%), Positives = 139/242 (57%)
Frame = +2
Query: 53 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQER 232
AGA+T+L D+ L T+FF+PA GGDP++YQ++F F+ HP VY+ +LP FG S II
Sbjct: 159 AGAVTMLFLDKYLGTNFFNPAKGGDPLIYQNIFWFYSHPVVYVQVLPVFGFYSEIIPVF- 217
Query: 233 GKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR 412
++ F F + HH+F G+ TR F+ T++IAVPTGIKIF
Sbjct: 218 ARRPLFGYTSMVFAVWAITAVSFFLWIHHMFVSGVPNWTRVLFSYTTLLIAVPTGIKIFN 277
Query: 413 *LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLS 592
+ T++ I++ +L LG VF+F +GGLTG+ L +ID+ + D+ +VV HFHYVL
Sbjct: 278 WMLTLYRGAIHFRSQMLYALGGVFMFLIGGLTGLPLGMVAIDLGVSDSLFVVGHFHYVLG 337
Query: 593 XXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSD 772
+ +PL TG + K+ F+ IF G NI +F Q G+ G PRRY D
Sbjct: 338 MAITLGILGAVIHWFPLATGKYYPENLGKLSFWLIFAGANIFYFLQMVAGMLGNPRRYPD 397
Query: 773 YP 778
YP
Sbjct: 398 YP 399
>UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4;
Halobacteriaceae|Rep: Cytochrome c oxidase polypeptide 1
- Halobacterium salinarium (Halobacterium halobium)
Length = 593
Score = 192 bits (469), Expect = 8e-48
Identities = 97/253 (38%), Positives = 143/253 (56%)
Frame = +2
Query: 59 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGK 238
A+ +LL DRN T+FF AGG DPI +QHLF FFGHPEVY+L+LP GI+S I+ + G+
Sbjct: 260 ALIMLLLDRNFGTTFFTVAGG-DPIFWQHLFWFFGHPEVYVLVLPPMGIVSLILPKFSGR 318
Query: 239 KETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*L 418
K F F V AHH+FT GID R+ F + ++ I++P+ +K+F +
Sbjct: 319 K-LFGFKFVVYSTLAIGVLSFGVWAHHMFTTGIDPRIRSSFMAVSLAISIPSAVKVFNWI 377
Query: 419 ATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXX 598
T+ ++ +L +GFV F +GG+TGV LA ID+ LHDTYYVV HFH+++
Sbjct: 378 TTMWNGKLRLTAPMLFCIGFVQNFIIGGVTGVFLAVIPIDLILHDTYYVVGHFHFIVYGA 437
Query: 599 XXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYP 778
+P+ TG + F+T +G N TF +LG G+PRRY+ Y
Sbjct: 438 IGFALFAASYYWFPMVTGRMYQKRLAHAHFWTALVGSNATFLAMLWLGYGGMPRRYATYI 497
Query: 779 DSYIS*NIIXSLG 817
+ + + + ++G
Sbjct: 498 PQFATAHRLATVG 510
>UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Alternative cytochrome c oxidase
polypeptide I) (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=25; Bacteria|Rep: Alternative cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Alternative cytochrome c
oxidase polypeptide I) (Cytochrome BB3 subunit 1)
(Oxidase BB(3) subunit 1) - Bradyrhizobium japonicum
Length = 591
Score = 192 bits (468), Expect = 1e-47
Identities = 101/249 (40%), Positives = 137/249 (55%), Gaps = 10/249 (4%)
Frame = +2
Query: 68 ILLTDRNLNTSFFDPA----------GGGDPILYQHLF*FFGHPEVYILILPGFGIISHI 217
+LL DR L TSFF P GGG P+L+QHLF FFGHPEVYI+ LP FGI+S +
Sbjct: 238 MLLLDRLLGTSFFMPTLVEMGQLSKYGGGSPLLFQHLFWFFGHPEVYIVALPAFGIVSDL 297
Query: 218 ISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTG 397
IS +K F F+V AHH++ G+ +F + T+IIA+PT
Sbjct: 298 ISTH-ARKNIFGYRMMVWAIVAIGALSFVVWAHHMYVSGMYPYFGFFFATTTLIIAIPTA 356
Query: 398 IKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHF 577
IK++ + T+ I+ +L LGF+ F GGLTG+ L N +D+ L DT +VVAHF
Sbjct: 357 IKVYNWVLTLWHGDIHLTVPMLFALGFIITFVNGGLTGLFLGNVVVDVPLSDTMFVVAHF 416
Query: 578 HYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIP 757
H V+ + YP TG LN + K F+ F+G + FFP H+LGL G+P
Sbjct: 417 HMVMGVAPIMVVLGAIYHWYPKVTGRMLNDVLGKFHFWVTFLGAYLIFFPMHYLGLLGVP 476
Query: 758 RRYSDYPDS 784
RRY + D+
Sbjct: 477 RRYFELGDA 485
>UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16;
cellular organisms|Rep: Cytochrome C oxidase subunit I -
Rhizobium loti (Mesorhizobium loti)
Length = 623
Score = 191 bits (465), Expect = 2e-47
Identities = 99/254 (38%), Positives = 142/254 (55%)
Frame = +2
Query: 14 ITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILP 193
+T+F A T L+ DR + T FF+PA GGD +L+QHLF FFGHPEVYI+ LP
Sbjct: 206 VTSFLVILAMPAIMIASTSLILDRLVGTHFFNPAEGGDVLLWQHLFWFFGHPEVYIIFLP 265
Query: 194 GFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSAT 373
G++S I++ ++ F F + HH+F G+ ++FT+++
Sbjct: 266 AVGMVSSIVATFT-QRPVFGYLAMVMALIATGVLAFGLWVHHMFVAGLPRLGESFFTASS 324
Query: 374 IIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHD 553
+ IAVP G++IF LATI + + L +GF+ +F +GGLTGV++A+ D +HD
Sbjct: 325 MAIAVPAGLQIFCWLATIWAGRPIFKTPFLFVIGFIVVFVIGGLTGVMVASVPFDTQVHD 384
Query: 554 TYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQH 733
TY+VVAHFHYVL +P TG ++ + + F IF G N+TFFP H
Sbjct: 385 TYFVVAHFHYVLVGGAVFPLLGAIYYWFPKLTGRMMSETLGRWSFGLIFSGFNLTFFPMH 444
Query: 734 FLGLAGIPRRYSDY 775
LGL G+PRR Y
Sbjct: 445 ILGLQGMPRRIYTY 458
>UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1;
Dicyema misakiense|Rep: Cytochrome c oxidase subunit I -
Dicyema misakiense
Length = 473
Score = 190 bits (464), Expect = 3e-47
Identities = 104/246 (42%), Positives = 148/246 (60%), Gaps = 2/246 (0%)
Frame = +2
Query: 53 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQER 232
A IT++LTD++L T F+D GGDP+LYQHLF FFGHPEVY++ILP FG+ S I Q
Sbjct: 187 AVGITLILTDKHLGTCFYDATMGGDPLLYQHLFWFFGHPEVYVVILPVFGLFSSSI-QLS 245
Query: 233 GKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR 412
+V AHH++T G+DIDTR+YFT+AT+IIAVPTGIKIF
Sbjct: 246 SLHRIPGELSLVLAMASIALIGSVVWAHHMYTAGLDIDTRSYFTAATMIIAVPTGIKIFT 305
Query: 413 *LAT-IHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVL 589
L++ + ++ N ++ F+ F +GG +G+IL+N+S+D LHDTYYVVAHFH V+
Sbjct: 306 WLSSLLTMKRMTLNSLTFLQVSFIVSFAIGGTSGIILSNASVDHYLHDTYYVVAHFHIVV 365
Query: 590 SXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFP-QHFLGLAGIPRRY 766
+ Y L + LSL + + ++F+ + + F QHF G + +PRRY
Sbjct: 366 ALSLVYGILVGL---YYLSSYLSLPFSLPLSGYASLFVFSSFSVFALQHFQGYSAMPRRY 422
Query: 767 SDYPDS 784
+ D+
Sbjct: 423 FMHSDT 428
>UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1); n=45;
Bacillales|Rep: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1) - Bacillus
subtilis
Length = 649
Score = 189 bits (460), Expect = 9e-47
Identities = 101/255 (39%), Positives = 142/255 (55%), Gaps = 2/255 (0%)
Frame = +2
Query: 59 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGK 238
A+ +L DR FF GG P+L+ +LF +GHPEVYI+ILP FGI S IIS +
Sbjct: 245 ALALLSFDRLFGAHFFTLEAGGMPMLWANLFWIWGHPEVYIVILPAFGIFSEIISSF-AR 303
Query: 239 KETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*L 418
K+ F F+V HH FT+G ++F+ T+ I++PTG+KIF L
Sbjct: 304 KQLFGYKAMVGSIIAISVLSFLVWTHHFFTMGNSASVNSFFSITTMAISIPTGVKIFNWL 363
Query: 419 ATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXX 598
T++ +I++ +L L F+ F +GG+TGV+LA ++ D H+TY++V+HFHYVL
Sbjct: 364 FTMYKGRISFTTPMLWALAFIPNFVIGGVTGVMLAMAAADYQYHNTYFLVSHFHYVLIAG 423
Query: 599 XXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDY- 775
YP G LN I K F+ IG NI FFPQ+FLGL G+PRR Y
Sbjct: 424 TVFACFAGFIFWYPKMFGHKLNERIGKWFFWIFMIGFNICFFPQYFLGLQGMPRRIYTYG 483
Query: 776 -PDSYIS*NIIXSLG 817
D + + N I ++G
Sbjct: 484 PNDGWTTLNFISTVG 498
>UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Euglena
gracilis|Rep: Cytochrome oxidase subunit I - Euglena
gracilis
Length = 495
Score = 188 bits (457), Expect = 2e-46
Identities = 99/245 (40%), Positives = 139/245 (56%), Gaps = 1/245 (0%)
Frame = +2
Query: 59 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGK 238
AIT LL DRN+N++ +D G DP+LYQHLF FFGHPEVY++ILP FG+ S I++
Sbjct: 217 AITGLLLDRNINSTIYDVIG--DPVLYQHLFWFFGHPEVYVIILPVFGLTSLILTSII-H 273
Query: 239 KETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*L 418
K+ F + V AHH+FTVG+DID+R+YF+ AT II++PT +K+F +
Sbjct: 274 KDIFGREGMMYCIISIGVVGYFVWAHHMFTVGLDIDSRSYFSIATSIISIPTSVKMFSYI 333
Query: 419 AT-IHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSX 595
T G N + F+ F GG TG++L++ S+DI LHDTY+VV HFH VLS
Sbjct: 334 NTWASGRGFRGNNSSWSFFSFLICFCFGGFTGLLLSSGSLDIMLHDTYFVVGHFHTVLSL 393
Query: 596 XXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDY 775
P+ S+ F + +G + F+P H GL+G+ RR +Y
Sbjct: 394 AATFGLLIAHYFFLPIIFSYSIFESFSFYHTFLLLVGALLVFYPMHLAGLSGMARRVPEY 453
Query: 776 PDSYI 790
D +I
Sbjct: 454 ADIFI 458
>UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16;
Bacteria|Rep: Cytochrome c oxidase subunit I -
Synechococcus sp. (strain CC9311)
Length = 564
Score = 187 bits (455), Expect = 4e-46
Identities = 96/254 (37%), Positives = 134/254 (52%)
Frame = +2
Query: 56 GAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERG 235
G +LL D + TSFF P GGGDP+L+QH F F+ HP VY+L+LP FGI S +
Sbjct: 230 GGAVMLLFDLSFGTSFFRPEGGGDPVLFQHFFWFYSHPAVYVLVLPVFGIFSELFPVY-A 288
Query: 236 KKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR* 415
+K F IV AHH+F G R F T++IA+PTG+K+F
Sbjct: 289 RKPLFGYRFVAIASFGITFLSLIVWAHHMFYTGTPNWMRHIFMFTTMLIAIPTGVKVFAW 348
Query: 416 LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSX 595
L T+ + N +L +G + F G+TGV+LA IDI + +TY+VVAHFHYV+
Sbjct: 349 LGTLWAGNLRLNTPMLFCIGGLINFIFAGITGVMLATVPIDIHVGNTYFVVAHFHYVIFN 408
Query: 596 XXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDY 775
+ +P FTG + K+ F FIG + + P H+ GL G+PRR + Y
Sbjct: 409 TIVFGVFAGIYHWFPKFTGKMYYEGLGKVHFVLTFIGATLNWLPLHWAGLLGMPRRVASY 468
Query: 776 PDSYIS*NIIXSLG 817
+ N+I S+G
Sbjct: 469 DPEFAIWNVIASIG 482
>UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase polypeptide
I (Cytochrome BB3 subunit 1) (Oxidase BB(3) subunit 1);
n=20; cellular organisms|Rep: Alternative Cytochrome c
oxidase polypeptide I (Cytochrome BB3 subunit 1) (Oxidase
BB(3) subunit 1) - Microscilla marina ATCC 23134
Length = 635
Score = 186 bits (452), Expect = 9e-46
Identities = 99/261 (37%), Positives = 141/261 (54%), Gaps = 10/261 (3%)
Frame = +2
Query: 14 ITAFXXXXXXXXXAGAITILLTDRNLNTSFFDP----AG------GGDPILYQHLF*FFG 163
ITA A +L+ DR+L TSFF AG GG P+L+QHLF F G
Sbjct: 242 ITAIIGLLSFPVLFSAALLLIFDRSLGTSFFLSEIYIAGEALHHQGGSPVLFQHLFWFLG 301
Query: 164 HPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDI 343
HPEVYI+++P GI S +I+ +K F FIV AHH+F G++
Sbjct: 302 HPEVYIVLIPALGITSEVIATN-ARKPIFGYKAMIGSILGIAVLSFIVWAHHMFVTGMNP 360
Query: 344 DTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILA 523
+ F T+IIAVP+ +K F + T+ I + P ++ +G V +F GG+TG+IL
Sbjct: 361 FLGSVFMFLTLIIAVPSAVKSFNYITTLWRGNIIFTPAMMFSIGLVSMFISGGVTGIILG 420
Query: 524 NSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFI 703
N+++DI LHDTYYVVAHFH V+ + +P G ++ + I F+ F+
Sbjct: 421 NNAMDIQLHDTYYVVAHFHLVMGSASFFGMMAGVYHWFPKMFGRMMDEKLGYIHFWFTFV 480
Query: 704 GVNITFFPQHFLGLAGIPRRY 766
G + FFP H++G+AG PRRY
Sbjct: 481 GAYLVFFPMHYIGIAGFPRRY 501
>UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5;
Proteobacteria|Rep: Cytochrome c oxidase, subunit I -
Mesorhizobium sp. (strain BNC1)
Length = 845
Score = 185 bits (451), Expect = 1e-45
Identities = 98/258 (37%), Positives = 148/258 (57%), Gaps = 5/258 (1%)
Frame = +2
Query: 59 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGK 238
A +L +R+ FF GGDP+L+QHLF FFGHPEVYI+ LP G++S I+ +
Sbjct: 231 ATMLLEIERSFGWPFFTAERGGDPLLWQHLFWFFGHPEVYIIFLPAAGLVSMIVPT-MAR 289
Query: 239 KETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*L 418
F + HH+FT GI + +F++A++ +A+P+GI++F +
Sbjct: 290 HPLVGYRLIVVALIGTGFFSFGLWVHHMFTTGIPSLSLGFFSAASMAVAIPSGIQVFSWI 349
Query: 419 ATIHGTQINYN---PNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVL 589
ATI ++ + P++ LGF+F+FTVGG+TGV++A ID +HDTY+VVAHFHYVL
Sbjct: 350 ATIASSKERFRITTPSLF-VLGFLFIFTVGGVTGVMVALVPIDFQVHDTYFVVAHFHYVL 408
Query: 590 SXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYS 769
P F+ L+ + + F+ +FIG N+TFFP H GL G+PRR
Sbjct: 409 IGGMVFPLFATFYYWIPAFSRNMLSERLGRWVFWLMFIGFNVTFFPMHMAGLLGMPRRVR 468
Query: 770 DYPD--SYIS*NIIXSLG 817
YPD + + N++ ++G
Sbjct: 469 TYPDGLGWNALNMVSTVG 486
>UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Trichoderma reesei (Hypocrea jecorina)
Length = 635
Score = 117 bits (282), Expect(2) = 2e-45
Identities = 60/100 (60%), Positives = 73/100 (73%), Gaps = 14/100 (14%)
Frame = +2
Query: 314 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFT 493
HH++TVG+D+DTRAYFT+AT+IIAVPTGIKIF LAT +G I P +L LGFVFLFT
Sbjct: 349 HHMYTVGLDVDTRAYFTAATLIIAVPTGIKIFSWLATCYGGSIKMTPVMLFSLGFVFLFT 408
Query: 494 VGGL--------------TGVILANSSIDITLHDTYYVVA 571
+GGL +GV+LAN+S+DI HDTYYVVA
Sbjct: 409 IGGLLNHLLWKINKFRFVSGVVLANASLDIAFHDTYYVVA 448
Score = 99 bits (238), Expect = 7e-20
Identities = 45/59 (76%), Positives = 50/59 (84%)
Frame = +2
Query: 62 ITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGK 238
IT++LTDRN NTSFF+ AGGGDPIL+QHLF FFGHPEVYILI+PGFGIIS IS K
Sbjct: 232 ITMVLTDRNFNTSFFEVAGGGDPILFQHLFWFFGHPEVYILIIPGFGIISTTISSSSNK 290
Score = 89.0 bits (211), Expect(2) = 2e-45
Identities = 41/89 (46%), Positives = 53/89 (59%)
Frame = +2
Query: 551 DTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQ 730
+T + HFHYVLS P G + + + K+QF+ +FIGVN TFFPQ
Sbjct: 476 ETMLFIVHFHYVLSMGAVFAMFAGWYFWSPKMLGFNYDLNLAKMQFWLLFIGVNATFFPQ 535
Query: 731 HFLGLAGIPRRYSDYPDSYIS*NIIXSLG 817
HFLGL G+PRR SDYPD++ N+I S G
Sbjct: 536 HFLGLQGMPRRISDYPDAFAGWNLISSFG 564
>UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacillus
flagellatus KT|Rep: Cytochrome-c oxidase -
Methylobacillus flagellatus (strain KT / ATCC 51484 /
DSM 6875)
Length = 631
Score = 184 bits (448), Expect = 3e-45
Identities = 97/241 (40%), Positives = 137/241 (56%)
Frame = +2
Query: 59 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGK 238
A +L DR FF A GDPIL+QHLF FFGHPEVYI+ +P G++S II +
Sbjct: 228 ASLMLALDRMAGMHFFT-AASGDPILWQHLFWFFGHPEVYIIFIPALGMVSSIIITFT-Q 285
Query: 239 KETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*L 418
+ F F + HH+FT G+ +FT+++ +IA+P+G++IF +
Sbjct: 286 RPIFGYIPIVLSIVAIGFIGFGLWVHHMFTAGLPQLGSNFFTASSAMIAIPSGVQIFCWI 345
Query: 419 ATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXX 598
AT+ G++ +L LGF +F +GGL+GV++A+ D+ HDTY+VVAHFHYVL
Sbjct: 346 ATLWGSKPKLATPLLHVLGFFLIFIIGGLSGVMVASVPFDMQAHDTYFVVAHFHYVLIGG 405
Query: 599 XXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYP 778
YP FTG ++ + K+ F+ F G N+TFFP H LGL G+PRR Y
Sbjct: 406 AVFPLLGGLYYWYPKFTGRMMSERLGKVAFWVTFAGFNLTFFPMHKLGLEGMPRRVYTYL 465
Query: 779 D 781
D
Sbjct: 466 D 466
>UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17;
Bacteria|Rep: Cytochrome C oxidase subunit I -
Symbiobacterium thermophilum
Length = 628
Score = 184 bits (447), Expect = 3e-45
Identities = 98/239 (41%), Positives = 131/239 (54%)
Frame = +2
Query: 59 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGK 238
A+ +L+ DR +FF+ GG + YQHLF FGHPEVYILILP GIIS +I +
Sbjct: 225 ALIMLMFDRTFAANFFEVLRGGSVVFYQHLFWTFGHPEVYILILPAMGIISEVIPVH-AR 283
Query: 239 KETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*L 418
K F F V +HH+FTVG+ + F+ T+ IAVPTG+KIF L
Sbjct: 284 KMLFGYSVMVFSTALIGFMGFTVWSHHMFTVGMGPVVNSIFSLTTMAIAVPTGVKIFNWL 343
Query: 419 ATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXX 598
+T+ G QI + +L +GF+ FT+GGL+G + A + D HDTY+VVAHFHYVL
Sbjct: 344 STMWGGQIRFTAAMLFAIGFIASFTIGGLSGFMHAAAPSDAQQHDTYFVVAHFHYVLIGG 403
Query: 599 XXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDY 775
+ +P G L+ + + F IF G + FP H LGL G+PRR Y
Sbjct: 404 SIFAILSGIHHWFPKVFGRMLDERLGRWSFALIFTGFHTFAFPFHILGLLGMPRRIYTY 462
>UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1;
Blastopirellula marina DSM 3645|Rep: Cytochrome c oxidase
subunit I - Blastopirellula marina DSM 3645
Length = 595
Score = 179 bits (435), Expect = 1e-43
Identities = 98/267 (36%), Positives = 140/267 (52%), Gaps = 11/267 (4%)
Frame = +2
Query: 5 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDP-----------AGGGDPILYQHLF 151
A+ ITA A ++L DR + T FF P AGGG P+L+QHLF
Sbjct: 225 AMFITALLQAFALPVLTAAGFMMLADRLIGTGFFLPEGLVVNNSPMAAGGGQPLLWQHLF 284
Query: 152 *FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTV 331
F+ HP VYI+ILP G++S I++ +K F FIV HH+F
Sbjct: 285 WFYSHPAVYIMILPAMGMVSDILACF-SRKPIFGYKPMVYSICGIAGLGFIVWGHHMFVS 343
Query: 332 GIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTG 511
G++ F AT++IA+P+ +K F L T++G ++ + +L L FV +F +GGL+G
Sbjct: 344 GMNPGLGMTFMVATMMIALPSAVKTFNWLGTVYGGKVQFTTPMLFALSFVSMFVIGGLSG 403
Query: 512 VILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFF 691
+ +A + +DI +HDTY++VAHFHYVL +P G +N KI F
Sbjct: 404 IFMAATPVDIVIHDTYFIVAHFHYVLFAGTAMAVFGSIYFWFPKMFGRMMNETAGKIHFA 463
Query: 692 TIFIGVNITFFPQHFLGLAGIPRRYSD 772
FI +N TFF H LG+ G PRR +D
Sbjct: 464 LTFIFLNGTFFTMHILGVGGFPRRLAD 490
>UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1;
Planctomyces maris DSM 8797|Rep: Cytochrome c oxidase
subunit I - Planctomyces maris DSM 8797
Length = 606
Score = 177 bits (431), Expect = 3e-43
Identities = 89/226 (39%), Positives = 128/226 (56%), Gaps = 1/226 (0%)
Frame = +2
Query: 116 GGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXX 295
GGG P+L+QHLF F+ HP VYI++LP G++S ++S +K F
Sbjct: 276 GGGQPLLWQHLFWFYSHPAVYIMLLPIMGMVSDMLSC-MCRKPLFGYKPMVFSMSAIASL 334
Query: 296 XFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLG 475
FIV HH+FT G++ F +T++IA+P+ IK F ATI G ++ +N L +
Sbjct: 335 GFIVWGHHMFTSGMNPAVGMAFMVSTMMIALPSAIKTFNWTATIWGGKLEFNTVTLNCIA 394
Query: 476 FVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGL 655
F+ +F VGGL+G+ +A +D+ HDTY++VAHFHY+L +P G
Sbjct: 395 FLSMFIVGGLSGIFMAAVPVDVYFHDTYFIVAHFHYILFGATLFGVFAGIQFWFPKMFGR 454
Query: 656 SLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSD-YPDSYI 790
+N + K F FIG N TFFP HFLG+ G+PRRY+D Y Y+
Sbjct: 455 MMNEKLGKTHFVLTFIGANGTFFPMHFLGMQGMPRRYADPYLHGYL 500
>UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3;
Theileria|Rep: Cytochrome c oxidase subunit 1 - Theileria
parva
Length = 481
Score = 175 bits (426), Expect = 1e-42
Identities = 101/273 (36%), Positives = 138/273 (50%), Gaps = 2/273 (0%)
Frame = +2
Query: 5 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYIL 184
++ +T+F ++ DR+ NT FF+ + GDP+LYQHLF FFGHPEVYI+
Sbjct: 193 SIVLTSFLLLLSLPVVTAVFLMVFLDRHYNTMFFESSNSGDPVLYQHLFWFFGHPEVYIM 252
Query: 185 ILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFT 364
ILPGFGIIS ++S KE F + YFT
Sbjct: 253 ILPGFGIISLLLSTYT-TKEMFGNQTMILAMGFNSFVRLFGLGTSYVHIRFGSRYSRYFT 311
Query: 365 SATIIIAVPTGIKIFR*LATIHGTQ-INYNPNIL*RLGFVFLFTVGGLTGVILANSSIDI 541
+ TI+IA+PTG KIF + T+ + I +L + F+ F +GG TGV+L N+ ID+
Sbjct: 312 TVTILIALPTGNKIFNWVTTLQCVESIKSLGLVLFTVLFIVNFVIGGTTGVVLGNAGIDL 371
Query: 542 TLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*Y-PLFTGLSLNSYILKIQFFTIFIGVNIT 718
LHDT YVV HFH+VLS L G+ L++ + + I V +T
Sbjct: 372 ALHDTVYVVGHFHFVLSIGAIISMICFIIYIQRMLLFGIILSNRLSSLIAPIFMISVLLT 431
Query: 719 FFPQHFLGLAGIPRRYSDYPDSYIS*NIIXSLG 817
F P HF G + +PRR DYPD N I +LG
Sbjct: 432 FLPMHFTGFSPLPRRIPDYPDEMWGWNFICTLG 464
>UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93;
Actinobacteria (class)|Rep: Cytochrome c oxidase subunit
1 - Corynebacterium glutamicum (Brevibacterium flavum)
Length = 584
Score = 175 bits (425), Expect = 2e-42
Identities = 92/238 (38%), Positives = 132/238 (55%)
Frame = +2
Query: 71 LLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETF 250
+L DR L +DPA GG +L+QHLF FFGHPEVY+L LP FGI+S II +K F
Sbjct: 235 VLYDRKLGGHLYDPANGGS-LLWQHLFWFFGHPEVYVLALPFFGIVSEIIPVF-SRKPMF 292
Query: 251 XXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIH 430
V AHH+F G + +F+ T +I+VPTG+K F + T+
Sbjct: 293 GYVGLIFATLSIGALSMAVWAHHMFVTGAVL--LPFFSFMTFLISVPTGVKFFNWVGTMW 350
Query: 431 GTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXX 610
I + ++ +GF+ F GGLTG++LA+ +D L D+Y+++AHFHY L
Sbjct: 351 KGHITWETPMIWSVGFMATFLFGGLTGIMLASPPLDFHLADSYFLIAHFHYTLFGTVVFA 410
Query: 611 XXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYPDS 784
+P TG ++ + KI F+ F+G + TF QH++G G+PRRY+DY DS
Sbjct: 411 SCAGVYFWFPKMTGRMMDERLGKIHFWLTFVGFHGTFLIQHWVGNMGMPRRYADYLDS 468
>UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III (EC
1.9.3.1) (Cytochrome c aa(3) subunit 1); n=2; Thermus
thermophilus|Rep: Cytochrome c oxidase polypeptide I+III
(EC 1.9.3.1) (Cytochrome c aa(3) subunit 1) - Thermus
thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Length = 791
Score = 173 bits (420), Expect = 7e-42
Identities = 86/239 (35%), Positives = 132/239 (55%)
Frame = +2
Query: 59 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGK 238
A ++L +R + S+F+PA GGDP+L+Q F F+ HP VY+++LP GI++ + S +
Sbjct: 215 ATLLVLLERKIGLSWFNPAVGGDPVLFQQFFWFYSHPTVYVMLLPYLGILAEVASTF-AR 273
Query: 239 KETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*L 418
K F +V AHH+FTVG + F T +IAVPTG+K+F +
Sbjct: 274 KPLFGYRQMVWAQMGIVVLGTMVWAHHMFTVGESTLFQIAFAFFTALIAVPTGVKLFNII 333
Query: 419 ATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXX 598
T+ G ++ + LGF+F F +GG+TGV+L+ + +D HD+Y+VVAHFH VL
Sbjct: 334 GTLWGGKLQMKTPLYWVLGFIFNFLLGGITGVMLSMTPLDYQFHDSYFVVAHFHNVLMAG 393
Query: 599 XXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDY 775
+P TG + + ++ F+ +G +TF PQ+ LG G+PRRY Y
Sbjct: 394 SGFGAFAGLYYWWPKMTGRMYDERLGRLHFWLFLVGYLLTFLPQYALGYLGMPRRYYTY 452
>UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1;
Myxococcus xanthus DK 1622|Rep: Cytochrome c oxidase,
subunit I - Myxococcus xanthus (strain DK 1622)
Length = 556
Score = 172 bits (418), Expect = 1e-41
Identities = 85/255 (33%), Positives = 129/255 (50%), Gaps = 1/255 (0%)
Frame = +2
Query: 56 GAITILLTDRNL-NTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQER 232
G + +L+T NL FDPA GGDP+L+QHLF F+ HP VYI++LP FG++S +++
Sbjct: 229 GLLLVLVTVENLFGFGMFDPARGGDPVLFQHLFWFYSHPAVYIMVLPSFGVMSEVVATY- 287
Query: 233 GKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR 412
+K F F HH+F G F T+I+ V T IK+F
Sbjct: 288 SRKNIFGYRAVAYSSLGIAFVGFFAWGHHMFVSGQSTFAGGLFGVLTMIVGVFTAIKVFN 347
Query: 413 *LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLS 592
+ T++ + + GF+F GG+TG+ L S+D+ HDTY+VVAHFH+++
Sbjct: 348 WVGTVYKGAVEFKTPFAYFCGFLFFTVFGGMTGIALGTVSLDVAWHDTYFVVAHFHFIMV 407
Query: 593 XXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSD 772
+P G + + + I +G N TF PQ LG G+PRRY +
Sbjct: 408 GATIMAFLAALHYWFPKMFGRTYHEGWGLVAAALIILGFNATFIPQFLLGNNGMPRRYYE 467
Query: 773 YPDSYIS*NIIXSLG 817
YP+ + + N+ + G
Sbjct: 468 YPERFQALNVASTAG 482
>UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30;
Proteobacteria|Rep: Cytochrome-c oxidase - Burkholderia
cenocepacia MC0-3
Length = 1004
Score = 171 bits (417), Expect = 2e-41
Identities = 91/255 (35%), Positives = 135/255 (52%), Gaps = 2/255 (0%)
Frame = +2
Query: 59 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGK 238
A +L DRN T FFD A GG P+L+QHLF F HP VY+++LP GI+S + +
Sbjct: 241 AFLLLWLDRNAGTHFFDVAHGGRPLLWQHLFWMFAHPWVYVVVLPAMGIVSDALPTFC-R 299
Query: 239 KETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*L 418
+ F V HH+F GI A+F +A+++I++P+ + +F +
Sbjct: 300 RPLVAYEAVAVSTVATMLIGFEVWVHHMFATGIAPLALAFFGAASMLISIPSAVAVFAWI 359
Query: 419 ATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXX 598
ATI + + L GFV +F VGG++GV+ A +D L DTY+VVAH HYVL
Sbjct: 360 ATIWTGRPVFRTPFLYFAGFVLMFVVGGVSGVMTAAVPLDWQLTDTYFVVAHLHYVLLGI 419
Query: 599 XXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYP 778
+P FTG +N K+ F+ + +G N+ FFP H GL G+PRR YP
Sbjct: 420 NVFPVLGGVAYWFPKFTGRMMNERFGKLTFWVVLVGFNLGFFPMHISGLLGMPRRIYTYP 479
Query: 779 D--SYIS*NIIXSLG 817
+ + N++ ++G
Sbjct: 480 SGMGWDTSNLLTTIG 494
>UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobacter
shibae DFL 12|Rep: Cytochrome-c oxidase -
Dinoroseobacter shibae DFL 12
Length = 853
Score = 170 bits (414), Expect = 3e-41
Identities = 88/237 (37%), Positives = 133/237 (56%)
Frame = +2
Query: 68 ILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKET 247
+L +R L FFD GGDP+L+QHLF FGHPEVYI+ LP G+++ ++ G K
Sbjct: 250 LLEAERLLGLPFFDHTLGGDPLLWQHLFWLFGHPEVYIIFLPAAGMVATMLPTFVG-KPL 308
Query: 248 FXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATI 427
F F + AHH+F G+ I + + F++A+ ++AVPTG++IF +AT+
Sbjct: 309 FGYGFAVAAVVTMSFLSFGLWAHHMFATGLPILSLSLFSAASTMVAVPTGVQIFCFIATL 368
Query: 428 HGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXX 607
+ + LGF+F+F +GG+TGV++A ++ HD+Y+VVAH HYVL
Sbjct: 369 SQGKPRLTVPMHFILGFLFIFVLGGMTGVMVAAVPFNLQAHDSYFVVAHLHYVLIGGMVF 428
Query: 608 XXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYP 778
P FTG ++ + K F+ +F G N+ FF H G+ G+PRR + YP
Sbjct: 429 PMFGALYYWVPHFTGRMMSERLGKWVFWLMFSGFNLAFFMMHLTGMRGMPRRVATYP 485
>UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=4;
cellular organisms|Rep: Cytochrome C oxidase subunit I
/III - Pyrobaculum aerophilum
Length = 800
Score = 170 bits (413), Expect = 5e-41
Identities = 90/247 (36%), Positives = 133/247 (53%), Gaps = 5/247 (2%)
Frame = +2
Query: 53 AGAITILLTDRNLNTSFF-----DPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHI 217
AGAI +LL +R+L FF DPA GDP L+QH+F FFGHPEVYIL+LP G++S +
Sbjct: 209 AGAIMLLL-ERHLGMHFFTPVPGDPAASGDPRLFQHIFWFFGHPEVYILVLPAMGLVSEV 267
Query: 218 ISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTG 397
I Q ++ + F V HH+FT D R AT+ +A+P+G
Sbjct: 268 I-QRMARRRAYGYTAIAISSVAIASISFAVWMHHMFTAVQDFAPRVAMAIATMAVAIPSG 326
Query: 398 IKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHF 577
+K+F +AT++G +I +L L F+ F VGG+TGV ++D+ LHDTY+V+ HF
Sbjct: 327 VKVFNWVATLYGGRIQLKAPMLFMLTFLLFFIVGGVTGVFFPVITLDLHLHDTYFVLGHF 386
Query: 578 HYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIP 757
HY+++ +P TG + + +I + I +G T+ G+ G P
Sbjct: 387 HYIVNAIAFGVFGALLYY-FPHLTGRWYDERLARISWALITVGGFATYTLMSAAGVLGSP 445
Query: 758 RRYSDYP 778
RRY+ P
Sbjct: 446 RRYAAAP 452
>UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2;
Acidobacteria|Rep: Cytochrome-c oxidase - Acidobacteria
bacterium (strain Ellin345)
Length = 595
Score = 169 bits (411), Expect = 8e-41
Identities = 92/255 (36%), Positives = 131/255 (51%), Gaps = 11/255 (4%)
Frame = +2
Query: 59 AITILLTDRNLNTSFFDPAG-----------GGDPILYQHLF*FFGHPEVYILILPGFGI 205
A +L DR TSFF P+G GG +L+QHLF FFGHPEVYI ILP GI
Sbjct: 242 ACILLCLDRVAGTSFFIPSGLVFNDHVIPHGGGSALLWQHLFWFFGHPEVYIAILPAMGI 301
Query: 206 ISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATIIIA 385
+SHI+ ++ ++V HH+F G++ + F+ T+II
Sbjct: 302 VSHILINSM-RRPLLSHRVVIGSMISIGFLSYVVWGHHMFVSGMNPLSSLVFSFPTLIIT 360
Query: 386 VPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYV 565
+P + L +++G+++ N L LGF+ +F GG++G LA SIDI LH TY+V
Sbjct: 361 IPATVLTLIWLGSLYGSRLRINSASLFALGFISMFVSGGVSGFFLAQPSIDIYLHATYFV 420
Query: 566 VAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGL 745
V HFH V+ +P TG +N + KI F+ FIG F P H+LG+
Sbjct: 421 VGHFHLVMGVAAIFGVFAGTYFWFPKMTGHMMNETLGKIHFWGTFIGAYCIFMPFHYLGM 480
Query: 746 AGIPRRYSDYPDSYI 790
G RRYS + D ++
Sbjct: 481 VGNVRRYSSFVDDFL 495
>UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit I;
n=22; Bacteria|Rep: Cytochrome o ubiquinol oxidase,
subunit I - Chromobacterium violaceum
Length = 680
Score = 167 bits (407), Expect = 2e-40
Identities = 89/243 (36%), Positives = 132/243 (54%), Gaps = 2/243 (0%)
Frame = +2
Query: 56 GAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERG 235
GA+ +L DR L+ FF GG+ ++Y +LF +GHPEVYIL+LP FGI S ++S G
Sbjct: 249 GALAMLALDRYLDFHFFTAELGGNAMMYLNLFWAWGHPEVYILVLPAFGIFSEVVSTFAG 308
Query: 236 KKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR* 415
K+ F F+V HH FT+G + A+F AT+II++PTG+K+F
Sbjct: 309 KR-LFGHKSMIYASGAISVLGFMVWLHHFFTMGSGANVNAFFGIATMIISIPTGVKLFNW 367
Query: 416 LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSX 595
L TI+ ++ + IL LGF+ F++GG+TGV+LA D LH++ +++AHFH +
Sbjct: 368 LFTIYKGRLRFETPILWTLGFMVTFSIGGMTGVLLAVPGADYVLHNSLFLIAHFHNTIIG 427
Query: 596 XXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRR--YS 769
+P G LN + K F+ IG F P + LG G+ RR ++
Sbjct: 428 GAVFGYLAGVSFWFPKVFGFKLNDKLGKASFWFWQIGFMFAFMPLYVLGFLGMTRRLNHT 487
Query: 770 DYP 778
D P
Sbjct: 488 DNP 490
>UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=1;
Beggiatoa sp. PS|Rep: Cytochrome c oxidase aa3, subunit
1 - Beggiatoa sp. PS
Length = 525
Score = 165 bits (400), Expect = 2e-39
Identities = 84/239 (35%), Positives = 127/239 (53%)
Frame = +2
Query: 59 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGK 238
A+T+L D+ + T FFD A GGD + YQ+LF F+ HP VY++ LP ++ I++
Sbjct: 205 AVTMLTFDKYIGTHFFDAAAGGDALTYQNLFWFYSHPAVYVIFLPFMAMVFEIVATFARN 264
Query: 239 KETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*L 418
+ V HH++ G+ R T++I++P G+ + +
Sbjct: 265 RVFNYKMVVYGGIGGIVLLSGEVWIHHLYVTGMPDWLRVGQMVTTVLISIPVGLMVIGLV 324
Query: 419 ATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXX 598
T++G I++ +L LGF+FLF +GGLTGV LA S+ + L +TYYVV HFHYV++
Sbjct: 325 GTLYGGSISFETPMLYALGFIFLFLIGGLTGVPLALVSLTVHLSETYYVVGHFHYVMAVA 384
Query: 599 XXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDY 775
+P TG N I K F+ F+GVNI F+ +G+ G+PRRY DY
Sbjct: 385 GTFAIFGGVYYIFPKMTGKMYNETIGKWAFWITFVGVNIVFWIMMDIGVEGMPRRYYDY 443
>UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alpha
precursor (DNA endonuclease I-SceIV) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI5 alpha (EC 3.1.-.-) (Intron-encoded
endonuclease I- SceIV)]; n=2; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI5 alpha precursor (DNA
endonuclease I-SceIV) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI5 alpha (EC 3.1.-.-) (Intron-encoded endonuclease I-
SceIV)] - Saccharomyces cerevisiae (Baker's yeast)
Length = 630
Score = 163 bits (397), Expect = 4e-39
Identities = 81/151 (53%), Positives = 98/151 (64%)
Frame = +2
Query: 5 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYIL 184
++ ITAF + IT+LL DRN NTSFF+ +GGGDPILY+HLF FFGHPEVYIL
Sbjct: 188 SIFITAFLLLLSLPVLSAGITMLLLDRNFNTSFFEVSGGGDPILYEHLFWFFGHPEVYIL 247
Query: 185 ILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFT 364
I+PGFGIISH++S KK F F+V +HH++ VG+D DTRAYFT
Sbjct: 248 IIPGFGIISHVVS-TYSKKPVFGEISMVYAMASIGLLGFLVWSHHMYIVGLDADTRAYFT 306
Query: 365 SATIIIAVPTGIKIFR*LATIHGTQINYNPN 457
SAT+IIA+PTGIKIF L N N N
Sbjct: 307 SATMIIAIPTGIKIFSWLMNPFSKDKNKNKN 337
>UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.-)
(Ubiquinol oxidase polypeptide I) (Cytochrome o subunit
1) (Oxidase BO(3) subunit 1); n=240; Bacteria|Rep:
Ubiquinol oxidase subunit 1 (EC 1.10.3.-) (Ubiquinol
oxidase polypeptide I) (Cytochrome o subunit 1) (Oxidase
BO(3) subunit 1) - Pseudomonas putida
Length = 672
Score = 163 bits (396), Expect = 5e-39
Identities = 87/242 (35%), Positives = 128/242 (52%), Gaps = 2/242 (0%)
Frame = +2
Query: 59 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGK 238
A+ +L DR L+ F GG+P++Y +LF +GHPEVYILILP FG+ S + S GK
Sbjct: 249 ALALLTVDRYLDFHIFTNELGGNPMMYVNLFWAWGHPEVYILILPAFGVFSEVTSTFAGK 308
Query: 239 KETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*L 418
+ F F V HH FT+G +F AT++I++PTG+K+F L
Sbjct: 309 R-LFGHHSMIYASGAIAVLGFAVWLHHFFTMGAGASVNTFFGLATMLISIPTGVKLFNWL 367
Query: 419 ATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXX 598
TI+ ++ + I+ LGF+ F++GG+TGV+LA D LH++ +V+AHFH V+
Sbjct: 368 FTIYQGRLRFTAPIMWTLGFMITFSIGGMTGVLLAVPGADFVLHNSLFVIAHFHNVIIGG 427
Query: 599 XXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRR--YSD 772
+P G +LN K F+ G + F P + LG G+ RR +SD
Sbjct: 428 AVFGYIAGFAYWFPKAFGFTLNEKWGKAAFWFWISGFYVAFMPLYALGFMGMTRRLNHSD 487
Query: 773 YP 778
P
Sbjct: 488 NP 489
>UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3;
Rhodobacteraceae|Rep: Cytochrome c, monohaem -
Rhodobacter sphaeroides ATCC 17025
Length = 878
Score = 163 bits (395), Expect = 7e-39
Identities = 82/233 (35%), Positives = 126/233 (54%)
Frame = +2
Query: 80 DRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXX 259
+R + FFDP GGDP+L+QHLF FGHPEVYI+ LP + + I+ ++
Sbjct: 254 ERGFDWPFFDPERGGDPLLWQHLFWIFGHPEVYIIFLPLIALAAMIVPTA-ARQPIVGYS 312
Query: 260 XXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQ 439
F + HH+FT G+ + +F++A+ + +PTGI++F +AT+ +
Sbjct: 313 WIVLSAVGTGFLSFGLWVHHMFTTGLPALSLGFFSAASEAVVIPTGIQLFAFVATLMVGR 372
Query: 440 INYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXX 619
+ +L G + +FT GGLTGV++A + D +HDTY++VAH HY L
Sbjct: 373 VKMILPMLWIAGGLAVFTAGGLTGVMVAIAPFDWQVHDTYFIVAHLHYTLFGGMVFPIIA 432
Query: 620 XXXN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYP 778
YP+ T +L+ + + F+ +F G N+TF P H GL G+PRR YP
Sbjct: 433 GVYYFYPVITKKALSERLGRWSFWLLFTGFNVTFLPMHLTGLKGMPRRVFTYP 485
>UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13;
Bacteria|Rep: Cytochrome c oxidase, subunit I - Azoarcus
sp. (strain EbN1) (Aromatoleum aromaticum (strain EbN1))
Length = 607
Score = 162 bits (394), Expect = 9e-39
Identities = 93/259 (35%), Positives = 138/259 (53%), Gaps = 6/259 (2%)
Frame = +2
Query: 59 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGK 238
A +L +R + FF GGDP+L+QHLF FFGHPEVYI+ LP G++S I+ +
Sbjct: 290 ATALLELERAFHWPFFAAHLGGDPLLWQHLFWFFGHPEVYIIFLPAAGMVSMIV-PTMAR 348
Query: 239 KETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*L 418
F + HH+FT GI + ++F +A+ +A+P+G+++F +
Sbjct: 349 TPLVGYRFVVLALVGTAFLSFGLWVHHMFTTGIPQLSLSFFQAASTAVAIPSGMQVFAWI 408
Query: 419 ATI-HGT---QINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYV 586
AT G ++ L LGF+F+F +GGLTGV++A D HD+Y++VAH HYV
Sbjct: 409 ATFARGRATGRVRIATPTLFILGFLFIFVLGGLTGVMVAVIPFDWQAHDSYFIVAHLHYV 468
Query: 587 LSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRY 766
L P + +L+ + + F +F+G NITFFP HF GLAG+PRR
Sbjct: 469 LVGGMVFPLFAAFYYWMPYTSRQALSERLGRWVFGLMFVGFNITFFPMHFTGLAGMPRRV 528
Query: 767 SDYPDSY--IS*NIIXSLG 817
Y Y S N + ++G
Sbjct: 529 YTYAAGYGWESLNFVSTVG 547
>UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=38;
Bacteria|Rep: Cytochrome c oxidase subunit I type -
Anaeromyxobacter sp. Fw109-5
Length = 555
Score = 162 bits (393), Expect = 1e-38
Identities = 79/253 (31%), Positives = 121/253 (47%)
Frame = +2
Query: 59 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGK 238
++ ++ + FDPA GGDP+L+QH F F+ HP VYI++LP +IS ++ +
Sbjct: 224 SLLLVAVEHAFGWGIFDPARGGDPVLFQHFFWFYSHPAVYIMVLPAMAVISEVVCAF-SR 282
Query: 239 KETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*L 418
K F F HH+FT G F ++ + + T IK+F
Sbjct: 283 KNIFGYKAVAYSSLGIAFVGFFTWGHHMFTSGQSAFNGGVFGVLSMFVGIFTAIKVFNWT 342
Query: 419 ATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXX 598
AT++ I + GF+F GG+TG+ LA S+D+ HDTY++VAHFH+++
Sbjct: 343 ATLYKGSIYFATPFAYFAGFLFFLVFGGMTGIALATVSLDVHWHDTYFIVAHFHFIMVGA 402
Query: 599 XXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYP 778
+P G L + I +G N TF PQ LG G+PRRY YP
Sbjct: 403 TVMAFLAALHYWFPKIAGKRLPEGWGLVAAVMIILGFNFTFIPQFLLGNEGMPRRYFSYP 462
Query: 779 DSYIS*NIIXSLG 817
+ + + N+ + G
Sbjct: 463 EKFWALNVASTAG 475
>UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48;
Oligohymenophorea|Rep: Cytochrome c oxidase subunit 1 -
Tetrahymena pyriformis
Length = 698
Score = 161 bits (390), Expect = 3e-38
Identities = 82/253 (32%), Positives = 136/253 (53%)
Frame = +2
Query: 59 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGK 238
A+ ++ DR+ T+FF+ A GGDPIL QHLF FFGHPEVY+LI+P FG I+ I+ +
Sbjct: 366 AVIMMAFDRHWQTTFFEYAYGGDPILSQHLFWFFGHPEVYVLIIPTFGFINMIVPHNNTR 425
Query: 239 KETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*L 418
+ ++V HH++ VG+D +R +++ TI+I++P IK+
Sbjct: 426 RVA-SKHHMIWAIYVMAYMGYLVWGHHMYLVGLDHRSRTMYSTITIMISMPATIKVVNWT 484
Query: 419 ATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXX 598
++ + + L + F+ LF V G TG+ L++ S+++++HDT+YVVAHFH +LS
Sbjct: 485 LSLVNGALKVDLPFLFSMSFLLLFLVAGFTGMWLSHVSLNVSMHDTFYVVAHFHIMLSGA 544
Query: 599 XXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYP 778
+ G+ + + G + F PQ +LG +G+PRR DYP
Sbjct: 545 AITGIFSGFYYYFNALFGIKFSRMFGYMHLIYYSGGQWVAFVPQFYLGFSGMPRRIHDYP 604
Query: 779 DSYIS*NIIXSLG 817
++ + + + G
Sbjct: 605 VVFMGWHSMSTAG 617
>UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol
oxidase, subunit 1; n=2; Thermoprotei|Rep:
Heme/copper-type cytochrome/quinol oxidase, subunit 1 -
Cenarchaeum symbiosum
Length = 508
Score = 159 bits (387), Expect = 7e-38
Identities = 86/257 (33%), Positives = 130/257 (50%), Gaps = 2/257 (0%)
Frame = +2
Query: 53 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQER 232
A A+ +LLTDR + FF+PA GGDPI Y HLF F HPEVY+L++P G++ ++ +
Sbjct: 205 AAALLMLLTDRLGVSGFFNPAVGGDPIAYAHLFWFTFHPEVYVLVIPAIGMMYEMVPR-F 263
Query: 233 GKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR 412
+K + F AHH+F G+ + F T+ + + +F
Sbjct: 264 SRKPIYSYNSGLFAFVLLTIVGFSSWAHHMFATGMSFTEKTVFMLGTLAAVPASAMHVFN 323
Query: 413 *LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLS 592
+AT+ +I ++ ++ +G + LF G GV+ A +D T HDTY+VV HFH +
Sbjct: 324 FVATMWNGRIRFDSPMMWSIGGIALFFSAGAGGVLNAAMPLDFTTHDTYWVVGHFHLFVM 383
Query: 593 XXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSD 772
+P TG N + KI F F+G + FF QH LG+ G+PRR D
Sbjct: 384 GTIAFGSIGFFYYMFPFVTGRMYNEKLGKIHFVFSFVGAVLLFFTQHILGIYGMPRRVYD 443
Query: 773 YP--DSYIS*NIIXSLG 817
YP +I+ N I ++G
Sbjct: 444 YPPIPEWIAMNQIATVG 460
>UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;
Aeropyrum pernix|Rep: Heme-copper oxidase subunit I+III
- Aeropyrum pernix
Length = 815
Score = 159 bits (385), Expect = 1e-37
Identities = 90/252 (35%), Positives = 134/252 (53%), Gaps = 2/252 (0%)
Frame = +2
Query: 68 ILLTDRNLNTSFF-DPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKE 244
+LL DRNL T FF +PAGG +L+ HLF FFGHPEVYIL+ P G ++ +IS GK
Sbjct: 217 LLLLDRNLGTEFFLNPAGGA--LLWDHLFWFFGHPEVYILLFPALGAMADVISTFSGKP- 273
Query: 245 TFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LAT 424
+ F+V HH+F G +I TR +++ TI+I++P + + + T
Sbjct: 274 IYAKRYILTAFLIATIISFVVWMHHMFITGTNIYTRLFYSITTILISIPFEMAVMSFIFT 333
Query: 425 IHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXX 604
++ ++ Y +L +G + F +GG TGV L + +ID TY+VVAHFHY+L
Sbjct: 334 LYKGRLVYTVPMLFAVGALLNFIIGGSTGVYLGSIAIDRGFRGTYWVVAHFHYILVGTVT 393
Query: 605 XXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYP-D 781
+P TG + + + KI F +GV +TF PQ L +PRRY Y
Sbjct: 394 LGLIAGLYYWWPKITGRTYSERLGKIHFALAMLGVALTFLPQ--FALMDMPRRYFTYDIP 451
Query: 782 SYIS*NIIXSLG 817
++ N + +LG
Sbjct: 452 EWVPLNQLSTLG 463
>UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2;
Deinococcus|Rep: Cytochrome c oxidase, subunit I -
Deinococcus radiodurans
Length = 820
Score = 158 bits (384), Expect = 2e-37
Identities = 86/230 (37%), Positives = 118/230 (51%)
Frame = +2
Query: 89 LNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXX 268
L S F+P GG P+LYQ F F+ HP VY+++LP GI + + S +K F
Sbjct: 233 LGLSMFNPGIGGVPVLYQQFFWFYSHPAVYVMLLPYLGIGAEVAST-MARKPLFGYRVMV 291
Query: 269 XXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINY 448
IV HH+F VGI + F +T+I+AVPTG+KIF + T+ G +I
Sbjct: 292 YSMLAIVLVSCIVWLHHMFAVGIPEAWQIAFMISTLIVAVPTGVKIFNLIGTLWGGRILM 351
Query: 449 NPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXX 628
+GF+F F +GG+TGV L D + +YYVVAHFH V+
Sbjct: 352 RMPTYWLIGFIFNFLIGGITGVSLGMIPFDYQVTMSYYVVAHFHNVMMFGTAFLAMAGLY 411
Query: 629 N*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYP 778
+P TG L+ + F+ IG +TF PQ+ LGL G+PRRY YP
Sbjct: 412 YWWPKMTGRFLDEKVGLAHFWLFMIGSWLTFLPQYILGLLGMPRRYYTYP 461
>UniRef50_Q9XLV8 Cluster: Cytochrome c oxidase subunit I; n=1;
Diplonema papillatum|Rep: Cytochrome c oxidase subunit I
- Diplonema papillatum
Length = 287
Score = 155 bits (376), Expect = 1e-36
Identities = 75/206 (36%), Positives = 118/206 (57%)
Frame = +2
Query: 173 VYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTR 352
VY++ILP FG++SH + + G + + V AHH+FTVG+D+DTR
Sbjct: 1 VYVIILPVFGLVSHSLHRG-GLFSLYNMLGMVYAMIAIAVVGYFVWAHHMFTVGLDVDTR 59
Query: 353 AYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSS 532
YF+SAT++IA+PT IK+F + + + + + F+ +F +GG+TG++LANS
Sbjct: 60 VYFSSATLLIALPTSIKVFSWMVGLRRMALASSAAWY-VVAFLLMFLLGGVTGLVLANSE 118
Query: 533 IDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVN 712
+D+ +HD+YYVVAHFHYVLS + + L +G +++L++Q + G
Sbjct: 119 VDLVMHDSYYVVAHFHYVLSLGAVFGLLNGVLSCHELCSGYRSAAWLLRVQVVLLVWGTT 178
Query: 713 ITFFPQHFLGLAGIPRRYSDYPDSYI 790
F+ H G G+PRR D PD Y+
Sbjct: 179 CIFWGMHLSGTLGLPRRVPDAPDGYL 204
>UniRef50_Q8LX70 Cluster: Cytochrome c oxidase subunit I; n=4;
Chaoborus|Rep: Cytochrome c oxidase subunit I -
Chaoborus crystallinus (Phantom midge) (Tipula
crystallina)
Length = 207
Score = 155 bits (375), Expect = 2e-36
Identities = 77/138 (55%), Positives = 91/138 (65%)
Frame = +2
Query: 335 IDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGV 514
+ + TRAYFTSAT+IIAVPTGIKIF LAT+HGTQINY+P++L LGFVFLFTVGGLTGV
Sbjct: 1 LTLHTRAYFTSATMIIAVPTGIKIFSWLATLHGTQINYSPSLLWALGFVFLFTVGGLTGV 60
Query: 515 ILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFT 694
+LANSS+DI LHDTYYVVAHFHYVLS P + ++K F
Sbjct: 61 VLANSSLDIVLHDTYYVVAHFHYVLSMGACICYYVSIYPLMPFINWVINKPLMIKNSIFN 120
Query: 695 IFIGVNITFFPQHFLGLA 748
FP FL ++
Sbjct: 121 NIFSCKFNIFPPTFLSIS 138
Score = 51.2 bits (117), Expect = 3e-05
Identities = 30/64 (46%), Positives = 36/64 (56%)
Frame = +1
Query: 607 CNYWGIY*LISFIYRPFIKFLYTKNSIFYNIYWSKYNIFSTTFFRFSWNTSTIFRLSRLI 786
C Y IY L+ FI K L KNSIF NI+ K+NIF TF S + ST+ LS LI
Sbjct: 92 CYYVSIYPLMPFINWVINKPLMIKNSIFNNIFSCKFNIFPPTFLSISRDASTMLWLSWLI 151
Query: 787 YFMK 798
+K
Sbjct: 152 LLLK 155
>UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3;
Proteobacteria|Rep: Cytochrome-c oxidase - Nitrosomonas
eutropha (strain C71)
Length = 703
Score = 153 bits (371), Expect = 6e-36
Identities = 87/250 (34%), Positives = 130/250 (52%), Gaps = 1/250 (0%)
Frame = +2
Query: 71 LLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETF 250
L DR L+ FF GG+ + + ++F FGHPEVYILILP FG+ S I S GK F
Sbjct: 273 LALDRYLDFHFFTNGLGGNQMNFLNMFWLFGHPEVYILILPAFGVYSEIFSTFSGKV-LF 331
Query: 251 XXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIH 430
F+V HH FT+G A F A+++I +PTG+KI+ + T+
Sbjct: 332 GYKSLVWATISIAFLSFLVWLHHFFTMGQSGHINAVFGIASMLIGIPTGVKIYDWMWTML 391
Query: 431 GTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXX 610
+I ++ ++ L F+FLF +GG+TG++LAN +D +H+T ++VAHFH ++
Sbjct: 392 RGRIRFSVPMIYSLAFIFLFVIGGITGIMLANPILDYQVHNTVFLVAHFHNMVVPGVLFG 451
Query: 611 XXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD-SY 787
+P G L+ +I + G FFP + LGL G+PRR Y SY
Sbjct: 452 MLAGYTFWFPKAFGFRLDERWGRISAYCWIFGWMGAFFPLYILGLMGLPRRSVAYEQASY 511
Query: 788 IS*NIIXSLG 817
+ I+ +G
Sbjct: 512 VPLEIVAFVG 521
>UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2;
Cystobacterineae|Rep: Cytochrome-c oxidase -
Anaeromyxobacter sp. Fw109-5
Length = 596
Score = 150 bits (363), Expect = 5e-35
Identities = 86/258 (33%), Positives = 126/258 (48%), Gaps = 5/258 (1%)
Frame = +2
Query: 14 ITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPA-----GGGDPILYQHLF*FFGHPEVY 178
+TA A +LL DR+ T FF GGGDPIL+QHLF FGHPEVY
Sbjct: 223 LTAILNALFVPVLGSAALLLLLDRSFGTEFFVAGASAVRGGGDPILWQHLFWIFGHPEVY 282
Query: 179 ILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAY 358
I+ILP +GI+ ++S K + + HH+F G+
Sbjct: 283 IMILPAWGILGDVLSFFARKPHHWYRGTVWAMVLVTVLSAMVY-GHHMFMTGMSPLLGEG 341
Query: 359 FTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSID 538
F T++I++P+ + + + T+ + Y+ +L LG VF+F VGGLTG+ L + S+D
Sbjct: 342 FMLFTLLISIPSMVVVVNWVLTLWQGSLRYDTPMLFALGTVFVFGVGGLTGLFLGDISMD 401
Query: 539 ITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVNIT 718
+ LHDT +VV HFH+ ++ +P G L + KI F+ F+G+ +
Sbjct: 402 LYLHDTMFVVGHFHFTMAAASVMGAFTGIYFWFPKMFGRRLGERLGKIHFWFTFLGLTLV 461
Query: 719 FFPQHFLGLAGIPRRYSD 772
F Q G AG RR D
Sbjct: 462 FGGQLLAGYAGQERRLFD 479
>UniRef50_A5FXH8 Cluster: Cytochrome-c oxidase; n=1; Acidiphilium
cryptum JF-5|Rep: Cytochrome-c oxidase - Acidiphilium
cryptum (strain JF-5)
Length = 689
Score = 147 bits (357), Expect = 3e-34
Identities = 82/239 (34%), Positives = 127/239 (53%)
Frame = +2
Query: 59 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGK 238
A+ +L DR L T FF GG+ +LY +LF +GHPEVY ++LP FG IS II +
Sbjct: 268 ALAMLGADRYLGTHFFTAGLGGNLMLYTNLFWIWGHPEVYFVVLPAFGFISEIIPTF-AE 326
Query: 239 KETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*L 418
K F + V HH FT+G +F++AT+++ +PTG+K+F
Sbjct: 327 KPLFGYATMVIATFAIGGISWGVWLHHFFTMGAGPGINIFFSTATMLVGIPTGVKVFNWA 386
Query: 419 ATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXX 598
T+ ++ + P +L LG +FL VGGLTG++LA +I+ T+H++ +VVAHFH ++
Sbjct: 387 LTLWRGRLRFEPPMLWALGALFLLLVGGLTGMMLAIPAINYTVHNSVFVVAHFHCMMLLI 446
Query: 599 XXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDY 775
+P G L++ + F++ +G + F LGL G+ RR DY
Sbjct: 447 AYAIFGAIIF-WFPKLFGFHLDAPSARANFWSFSVGTVLVFGAMFALGLMGMTRRL-DY 503
>UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit I;
n=1; Candidatus Carsonella ruddii PV|Rep: Cytochrome O
ubiquinol oxidase subunit I - Carsonella ruddii (strain
PV)
Length = 606
Score = 147 bits (356), Expect = 4e-34
Identities = 86/238 (36%), Positives = 126/238 (52%), Gaps = 3/238 (1%)
Frame = +2
Query: 71 LLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETF 250
+ DR L+T F+ GG +LY +L +GHPEVYILILP FGI S IIS K F
Sbjct: 248 IFLDRTLSTHFYSSFYGGQQMLYINLIWAWGHPEVYILILPSFGIFSEIISY-ICVKSVF 306
Query: 251 XXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIH 430
F+V HH FT+G + +F+ +T+IIA+PTG+KIF + TI
Sbjct: 307 SYISLIYATISITVLSFLVWLHHFFTMGSGYLSNIFFSISTMIIAIPTGVKIFNWIFTIL 366
Query: 431 GTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXX 610
+ + + F+ +F++GG +GVIL+ ++D H++ +++AHFH V+
Sbjct: 367 FSNFKKDILFFWFISFIIIFSIGGFSGVILSIPNLDFIFHNSMFLIAHFHSVIIGGVLFG 426
Query: 611 XXXXXXN*YPL-FTGLSLNSYILKIQFFTIF--IGVNITFFPQHFLGLAGIPRRYSDY 775
Y L + LN+ K F +F IGV +TFFP +FLG G+ RR + Y
Sbjct: 427 YLSGISLWYNLIYNNCELNN---KFNFNILFWLIGVILTFFPFYFLGYCGMIRRINIY 481
>UniRef50_Q4XXN6 Cluster: Putative uncharacterized protein; n=1;
Plasmodium chabaudi|Rep: Putative uncharacterized
protein - Plasmodium chabaudi
Length = 329
Score = 146 bits (355), Expect = 5e-34
Identities = 75/169 (44%), Positives = 104/169 (61%), Gaps = 3/169 (1%)
Frame = +2
Query: 320 IFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQ--INYNPNIL*RLGFVFLFT 493
++T G+++DTRA+FTS TI+I++PTG K+F L T T I ++ ++L L F+ FT
Sbjct: 1 MYTTGLEVDTRAFFTSTTILISIPTGTKVFNWLCTYMSTNFGITHSSSLL-SLLFICTFT 59
Query: 494 VGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSL-NSY 670
GG TGVIL N +ID+ LHDTYYV+AHFH+VLS F G +L +
Sbjct: 60 FGGTTGVILGNGAIDVALHDTYYVIAHFHFVLSIGAIIALFTSVSFFQESFFGKTLRENT 119
Query: 671 ILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYPDSYIS*NIIXSLG 817
I+ + F+GV +TF P HFLG +PRR DYPD+ N+I S+G
Sbjct: 120 IIVLWSILFFVGVVLTFLPMHFLGFNVMPRRIPDYPDALNGWNMICSIG 168
>UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5;
Sulfolobaceae|Rep: Quinol oxidase subunit 1/3 -
Sulfolobus acidocaldarius
Length = 788
Score = 144 bits (349), Expect = 3e-33
Identities = 80/243 (32%), Positives = 124/243 (51%), Gaps = 1/243 (0%)
Frame = +2
Query: 53 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQER 232
AG + L +R T FFD A GG P+L+Q LF FFGHPEVYILILP G++S ++ +
Sbjct: 202 AGLVFAYL-ERLWGTPFFDSALGGSPVLWQQLFWFFGHPEVYILILPAMGLVSELLPK-M 259
Query: 233 GKKETFXXXXXXXXXXXXXXXXFI-V*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIF 409
++E F + V HH+FT + + ++ T+ IA+P+G+K+
Sbjct: 260 ARREIFGYTAIALSSIAIAFLSALGVWMHHMFTAIDNTLVQIVSSATTMAIAIPSGVKVL 319
Query: 410 R*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVL 589
AT++G +I Y + + F+ +F +GG+TGV ID L+ TY+VV HFHY++
Sbjct: 320 NWTATLYGGEIRYKTPTILLISFIVMFLLGGITGVFFPLVPIDYALNGTYFVVGHFHYMV 379
Query: 590 SXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYS 769
+P ++G N + K + G +T G+ G+PRRY+
Sbjct: 380 YAILYALLGALFYY-FPFWSGKWYNDDLGKTGAILLVAGTFLTATGMSIAGILGMPRRYA 438
Query: 770 DYP 778
P
Sbjct: 439 VIP 441
>UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2;
Rhodobacteraceae|Rep: QoxA, Quinol oxidase subunit I -
Roseovarius nubinhibens ISM
Length = 818
Score = 140 bits (339), Expect = 4e-32
Identities = 81/236 (34%), Positives = 117/236 (49%)
Frame = +2
Query: 68 ILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKET 247
+L +R + FF A GGD +L+QHLF FGHPEVYI+ LP G IS I+ +
Sbjct: 224 LLELERAFDMPFFQAAAGGDALLWQHLFWLFGHPEVYIIFLPAAGAISTIL-PVMARTGL 282
Query: 248 FXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATI 427
F + HH+FT GI A+F++A+ ++AVPT +++F + T+
Sbjct: 283 LGYGWIVAAAVALGVLSFGLWVHHMFTTGIPHLGLAFFSAASTLVAVPTAVQLFIWIGTL 342
Query: 428 HGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXX 607
+ +L L F F +GGLTGV++A D +HDTY++VAH HYVL
Sbjct: 343 AKGAPRLHLPMLWLLAFFATFVIGGLTGVMVAIVPFDWQVHDTYFIVAHLHYVLIGGFVF 402
Query: 608 XXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDY 775
P FTG + F+ + IG + TF H+ GL G+ RR +
Sbjct: 403 PMLAALYYWLPHFTGRKTYFNLGPTAFWLVVIGFHGTFLLLHWAGLLGMRRRIDSF 458
>UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15;
Proteobacteria|Rep: Quinol oxidase subunit I -
Rhodobacter sphaeroides (Rhodopseudomonas sphaeroides)
Length = 825
Score = 139 bits (336), Expect = 1e-31
Identities = 86/253 (33%), Positives = 125/253 (49%), Gaps = 3/253 (1%)
Frame = +2
Query: 68 ILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKET 247
+L +R FF A GGD +L+QHLF FGHPEVYI+ LP G IS I+ + E
Sbjct: 224 LLELERAFGLPFFQVAEGGDSLLWQHLFWLFGHPEVYIIFLPAAGAISTIL-PVMARTEL 282
Query: 248 FXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATI 427
F + HH+FT GI A F++A+ ++AVPT +++F + T+
Sbjct: 283 IGYRWVVAAAISLAVLSFGLWVHHMFTTGIPHMGLALFSAASTLVAVPTAVQLFAWIGTL 342
Query: 428 -HGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXX 604
GT P ++ L F F +GGLTGV++A D +HDT+++VAH HYVL
Sbjct: 343 WRGTPEMRLP-MMWILAFFATFVIGGLTGVMVAVVPFDWQVHDTHFIVAHLHYVLVGGFV 401
Query: 605 XXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYP-- 778
P TG + + F+ + +G + TF H++GL G RR Y
Sbjct: 402 FPMLAALYYWMPHVTGRKRFFRVGDVAFWLVTVGFHATFLAVHWVGLLGQRRRTETYEPG 461
Query: 779 DSYIS*NIIXSLG 817
+ N+I S+G
Sbjct: 462 QGWEVINLISSIG 474
>UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5;
Naupactini|Rep: Cytochrome c oxidase subunit I -
Galapaganus collaris
Length = 406
Score = 134 bits (325), Expect = 2e-30
Identities = 105/232 (45%), Positives = 113/232 (48%)
Frame = +2
Query: 5 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYIL 184
AV ITA AGAIT+LLTDRN+NTSFFDPAGGGDPILYQHLF F GH
Sbjct: 106 AVEITAILLLLSLPVLAGAITMLLTDRNINTSFFDPAGGGDPILYQHLFWFXGHXXXXXX 165
Query: 185 ILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFT 364
Y
Sbjct: 166 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYLX 225
Query: 365 SATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDIT 544
SA P G+K F + + G P I F GGLTGVILANSS DI
Sbjct: 226 SAXXFXXGPPGVK-FLGDSYLSGNFNFXKPQIFMIFSIYFSIHGGGLTGVILANSSXDII 284
Query: 545 LHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIF 700
LHDTYYVVAH HYVLS +PLFTGL+L I F I+
Sbjct: 285 LHDTYYVVAHXHYVLSMGAVFAILAGIVQWFPLFTGLTLTMNIKNTIFSYIY 336
Score = 54.0 bits (124), Expect = 5e-06
Identities = 24/41 (58%), Positives = 31/41 (75%)
Frame = +1
Query: 676 KNSIFYNIYWSKYNIFSTTFFRFSWNTSTIFRLSRLIYFMK 798
KN+IF IYWSK+NIFS+T S NT+T+F LS ++FMK
Sbjct: 328 KNTIFSYIYWSKFNIFSSTLCSISSNTTTLFWLSSCLHFMK 368
>UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3;
Halobacteriaceae|Rep: Cytochrome c oxidase subunit I -
Haloarcula marismortui (Halobacterium marismortui)
Length = 854
Score = 134 bits (325), Expect = 2e-30
Identities = 82/270 (30%), Positives = 125/270 (46%), Gaps = 11/270 (4%)
Frame = +2
Query: 5 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFF-----------DPAGGGDPILYQHLF 151
++ +T + A+ IL +D L T++F D G +L+ HLF
Sbjct: 198 SINLTVWMMLFAFAALLAALMILASDHILGTTYFQYSIDGTTMATDADNPGASLLWAHLF 257
Query: 152 *FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTV 331
FFGHPEVYI+ P G+++ G++ F+V HH+F
Sbjct: 258 WFFGHPEVYIVFFPALGVMAECFQTFTGRR-LVGRKWFIISMVLVALQSFVVWMHHMFLT 316
Query: 332 GIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTG 511
GI++ + F + TI I++P + +F + T+ ++ + L LG + LF +GG+TG
Sbjct: 317 GINLPIKTIFMATTIGISLPFDLMVFSLIYTMAKGRVRFTTPFLFSLGALILFIIGGITG 376
Query: 512 VILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFF 691
V L +D TY+VVAHFHYV+ YP TG N + KIQF
Sbjct: 377 VFLGAIVLDYQFRGTYWVVAHFHYVM-VAGATALFGGLYYWYPKITGKMYNETLGKIQFG 435
Query: 692 TIFIGVNITFFPQHFLGLAGIPRRYSDYPD 781
F+G N+ +FP F+ PRR YP+
Sbjct: 436 VYFLGFNLLYFPM-FIAWE-TPRRVFVYPE 463
>UniRef50_Q9TAP9 Cluster: Cytochrome c oxidase subunit I; n=2;
Toxoplasma gondii|Rep: Cytochrome c oxidase subunit I -
Toxoplasma gondii
Length = 192
Score = 128 bits (309), Expect = 2e-28
Identities = 73/178 (41%), Positives = 96/178 (53%), Gaps = 9/178 (5%)
Frame = +2
Query: 311 AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNP-NIL*RLGFVFL 487
AHH+ TVG++ DTRAYF++ TI+IA+PTG KIF L T + ++ L F+ L
Sbjct: 2 AHHMMTVGLEGDTRAYFSAMTIMIAIPTGTKIFNWLGTYMASHNTTRTIDLWAALCFILL 61
Query: 488 FTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLN- 664
FT+GG TGV++ N+ +DI LHDTYY+VAHFH+VLS G +LN
Sbjct: 62 FTLGGTTGVVMGNAGMDIALHDTYYIVAHFHFVLSLGAILATICGFVFYSKDMFGDTLNL 121
Query: 665 -------SYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYPDSYIS*NIIXSLG 817
S L I F + + F P H LG +PRR DYPD N S+G
Sbjct: 122 FHVNTGSSPYLNIWFVVFLASIMLIFLPMHILGFNVMPRRIPDYPDYLCYINTWCSIG 179
>UniRef50_Q6XYE8 Cluster: Cytochrome c oxidase subunit I; n=2;
Endopterygota|Rep: Cytochrome c oxidase subunit I -
Copitarsia incommoda
Length = 150
Score = 128 bits (309), Expect = 2e-28
Identities = 56/81 (69%), Positives = 62/81 (76%)
Frame = +1
Query: 85 KLKYIIF*SCWRRRPNFISTFILIFWTS*SLYFNFTRIWYNFSYYFTRKRKKRNFWLFRN 264
K KYIIF S W F+STFILIFWT SLYFNFT IWYNFSYYF K KK N W+F +
Sbjct: 7 KFKYIIFWSSWSSWSYFMSTFILIFWTPSSLYFNFTSIWYNFSYYFPSKSKKGNLWVFSD 66
Query: 265 NLCYTSNWVIRIHCLSSSYIH 327
NLCY SNW+I I+CLSSSYI+
Sbjct: 67 NLCYISNWIISIYCLSSSYIY 87
Score = 95.1 bits (226), Expect = 2e-18
Identities = 46/54 (85%), Positives = 49/54 (90%)
Frame = +2
Query: 356 YFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVI 517
YFTSAT+IIAVPTGIKIF LAT HGTQINY+P+IL LGFVFLFTVGGLTGVI
Sbjct: 97 YFTSATMIIAVPTGIKIFSWLATFHGTQINYSPSILWSLGFVFLFTVGGLTGVI 150
>UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;
n=2; Thermoplasmatales|Rep: Cytochrome c oxidase
polypeptide I/III - Picrophilus torridus
Length = 841
Score = 114 bits (274), Expect = 3e-24
Identities = 72/244 (29%), Positives = 115/244 (47%)
Frame = +2
Query: 56 GAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERG 235
G +LL ++ S++ GG +++++LF +FGHPEVY+L+LPG G + +S
Sbjct: 234 GLFFLLLVGNLMHASYYISNYGG-ALMWENLFWYFGHPEVYLLLLPGTGAMFDYLSN-LN 291
Query: 236 KKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR* 415
+ + +V HH F GI + T I++PT + I
Sbjct: 292 HRPPYLKKWMIAAMGAISVDSVMVFLHHTFMTGIVFAWLMADSIFTETISIPTSMLIVGL 351
Query: 416 LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSX 595
+AT+ G + + IL L F +GG++GV ++ +ID +H YYVVAHFHY +
Sbjct: 352 IATMIGGRHKFQTPILFALAASTSFMIGGVSGVTQSSLAIDTIVHGDYYVVAHFHYFMVG 411
Query: 596 XXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDY 775
+P FTG + + +I + + GVNI +FP F L +PRR Y
Sbjct: 412 VAVMGLMGNLYYYFPKFTGRMYSEKLGRIHWAFAYPGVNILYFPMFF--LYDLPRRVYTY 469
Query: 776 PDSY 787
+
Sbjct: 470 QSGF 473
>UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida
stellata|Rep: Cox1-i4 protein - Candida stellata (Yeast)
Length = 676
Score = 111 bits (268), Expect = 2e-23
Identities = 56/116 (48%), Positives = 70/116 (60%)
Frame = +2
Query: 5 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYIL 184
+V ITA A +T+LL DRN NTSFF +GGGDP+LY+H+F FFGHPEVYIL
Sbjct: 205 SVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPLLYEHIFWFFGHPEVYIL 264
Query: 185 ILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTR 352
I+P FG++S I+ Q KK F F V +HH+FTVG+D D R
Sbjct: 265 IVPVFGVVSQIV-QVYAKKPIFGKIGMIYAMASIGFLGFCVWSHHMFTVGLDADKR 319
>UniRef50_O86945 Cluster: Sub-unit I of an aa3-type cytochrome
oxidase; n=1; Acidithiobacillus ferrooxidans|Rep:
Sub-unit I of an aa3-type cytochrome oxidase -
Thiobacillus ferrooxidans (Acidithiobacillus
ferrooxidans)
Length = 627
Score = 110 bits (264), Expect = 5e-23
Identities = 70/226 (30%), Positives = 98/226 (43%)
Frame = +2
Query: 98 SFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXX 277
S F G P+ Y F F HPEVY+ ILP F I I+ K+ F
Sbjct: 311 SHFYTGPTGHPLAYLDQFWFLFHPEVYVFILPAFAIWLEILPAA-AKRPLFARGWAIAGL 369
Query: 278 XXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPN 457
+ HH FT D + T T +++PTG + TI G ++ N
Sbjct: 370 VGVSMSGAMSGVHHYFTAVSDARMPIFMT-ITETVSIPTGFIYLSAIGTIWGGRLRINAA 428
Query: 458 IL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*Y 637
+L L + F +GGLTG+ A+ D+ LH+TY+V+AHFH +
Sbjct: 429 VLLVLMAMMNFLIGGLTGIFNADVPADLQLHNTYWVIAHFHIRCFGGVIFTWIAALYWWF 488
Query: 638 PLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDY 775
P TG +N + K + F+ N TFFP GL G+ RR + Y
Sbjct: 489 PKVTGRKINEFWGKFHAWWSFVFFNCTFFPMFIAGLDGMNRRIAIY 534
>UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30;
Panarthropoda|Rep: Cytochrome c oxidase subunit I -
Pagyris cymothoe
Length = 487
Score = 103 bits (246), Expect = 8e-21
Identities = 49/61 (80%), Positives = 50/61 (81%)
Frame = +2
Query: 5 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYIL 184
AVGITA AGAIT+LLTDRNLNTSFFDPAGGGDPILYQHLF FFGHPEVYIL
Sbjct: 160 AVGITALLLLLSLPVLAGAITMLLTDRNLNTSFFDPAGGGDPILYQHLFWFFGHPEVYIL 219
Query: 185 I 187
I
Sbjct: 220 I 220
>UniRef50_Q8LX74 Cluster: Cytochrome c oxidase subunit I; n=1;
Chaoborus punctipennis|Rep: Cytochrome c oxidase subunit
I - Chaoborus punctipennis
Length = 205
Score = 97.1 bits (231), Expect = 5e-19
Identities = 45/55 (81%), Positives = 50/55 (90%)
Frame = +2
Query: 338 DIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGG 502
D+DTRAYFTSAT+IIAVPTGIKIF LAT+HGTQINY P++L LGFVFLFTVGG
Sbjct: 1 DVDTRAYFTSATMIIAVPTGIKIFSWLATLHGTQINYTPSLLWALGFVFLFTVGG 55
Score = 39.9 bits (89), Expect = 0.083
Identities = 22/41 (53%), Positives = 24/41 (58%)
Frame = +3
Query: 678 KFNFLQYLLE*I*HFFHNIF*V*LEYLDDIQIIQTHIFHEI 800
KFN Y LE I HF HNIF EYLDDIQI + E+
Sbjct: 115 KFNLQLYFLELILHFSHNIFLDLPEYLDDIQIFLMDLIVEM 155
>UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26;
Bilateria|Rep: Cytochrome c oxidase subunit I - Samia
cynthia ricini (Indian eri silkmoth)
Length = 510
Score = 95.1 bits (226), Expect = 2e-18
Identities = 44/57 (77%), Positives = 47/57 (82%)
Frame = +2
Query: 5 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEV 175
AVGITAF AGAIT+LLTDRNLNTSFFDPAGGGDPILYQHLF FFGHP++
Sbjct: 184 AVGITAFLLLLSLPVLAGAITMLLTDRNLNTSFFDPAGGGDPILYQHLFWFFGHPKL 240
Score = 54.4 bits (125), Expect = 4e-06
Identities = 71/226 (31%), Positives = 75/226 (33%)
Frame = +3
Query: 192 QDLV*FLILFHXXXXXXXXXXXXXXFMLY*QLGY*DSLFEXXXXXXXXXXXXXXXXXXXX 371
QDLV F +LF FM L Y D LFE
Sbjct: 246 QDLVSFHMLFPKKVEKSKLLVVSVSFMQSWLLVYSDLLFELIMYLPSESMLKLELVLHQQ 305
Query: 372 XXXXXXXXXXKFLDD*LQYMELKLIITLIFYED*VLYFYSQ*ED*QV*F*PXXXXXXXXX 551
KFL D +MELKLI+ L FYED L FY Q ED F
Sbjct: 306 LSLLLSQLGLKFLVDWQPFMELKLIMVLQFYEDWDLCFYLQSEDSLELFSLIHPLMLLYM 365
Query: 552 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFH*ILIY*KFNFLQYLLE*I*HFFHN 731
+ I Y KFNFL Y E I F N
Sbjct: 366 MHIMLSHISIMFFPSGQYLLLSADLFIDTLYLLDYLSIHSYSKFNFLLYSSELISLFSLN 425
Query: 732 IF*V*LEYLDDIQIIQTHIFHEI*XLH*VHIFLYYQ***Y*LLFEN 869
IF LEYLDDI IIQ EI H F Y LLFEN
Sbjct: 426 IFSGSLEYLDDILIIQILTSLEISFHHSDLTFHCLPSYSYSLLFEN 471
>UniRef50_Q9TCV5 Cluster: Cytochrome c oxidase subunit I; n=6;
Digenea|Rep: Cytochrome c oxidase subunit I -
Echinostoma hortense
Length = 154
Score = 85.4 bits (202), Expect = 2e-15
Identities = 40/93 (43%), Positives = 52/93 (55%)
Frame = +2
Query: 155 FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVG 334
FFGHPEVY+LILP FGI+SHI F +V AHH+F VG
Sbjct: 1 FFGHPEVYVLILPVFGIVSHICMTFTNNDSLFGYYGLVLAMLAIVCLGSVVWAHHMFMVG 60
Query: 335 IDIDTRAYFTSATIIIAVPTGIKIFR*LATIHG 433
D+ T +F+S T++I +PTGIK+F L + G
Sbjct: 61 YDVHTAVFFSSVTMVIGIPTGIKVFSWLIMLGG 93
>UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455;
cellular organisms|Rep: Cytochrome c oxidase subunit I -
Pandaka lidwilli
Length = 507
Score = 78.6 bits (185), Expect = 2e-13
Identities = 33/47 (70%), Positives = 39/47 (82%)
Frame = +2
Query: 677 KIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYPDSYIS*NIIXSLG 817
KI F +F+GVN+TFFPQHFLGLAG+PRRYSDYPD+Y N + SLG
Sbjct: 400 KIHFGVMFVGVNLTFFPQHFLGLAGMPRRYSDYPDAYTLWNTVSSLG 446
Score = 41.1 bits (92), Expect = 0.036
Identities = 21/36 (58%), Positives = 23/36 (63%)
Frame = +2
Query: 5 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDP 112
AV ITA A IT+LLTDRNLNT+FFDP
Sbjct: 176 AVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDP 211
>UniRef50_Q8LX68 Cluster: Cytochrome oxidase I; n=2; Chaoborus|Rep:
Cytochrome oxidase I - Chaoborus pallidus
Length = 206
Score = 77.0 bits (181), Expect = 6e-13
Identities = 48/131 (36%), Positives = 60/131 (45%)
Frame = +1
Query: 406 F*MTSYNTWNSN*L*P*YFMKIRFCIFIHSRRINRCNFSQFFXXXXXXXXXXXXXXXXXX 585
F MT Y +W++N L P + FC FI+ N +FSQF
Sbjct: 24 FLMTCYPSWDTNLLHPSPPLSFSFCFFIYRWSFNSGSFSQFLNWYYSTWYLLCCSSFPLR 83
Query: 586 XXXXXXXCNYWGIY*LISFIYRPFIKFLYTKNSIFYNIYWSKYNIFSTTFFRFSWNTSTI 765
CNY IY L+ + F K KNSI+ NIY SK NIFS TFF +T +
Sbjct: 84 SFNSSSICNYISIYPLMPPLNWTFYKSKMIKNSIYNNIYSSKSNIFSPTFFSACRDTPPL 143
Query: 766 FRLSRLIYFMK 798
F SRLI +K
Sbjct: 144 FWFSRLILLLK 154
>UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Homalopoma maculosa
Length = 219
Score = 74.1 bits (174), Expect = 4e-12
Identities = 35/49 (71%), Positives = 37/49 (75%)
Frame = +2
Query: 5 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF 151
+V ITA AGAIT+LLTDRN NTSFFDPAGGGDPILYQHLF
Sbjct: 170 SVKITAILLLLSLPVLAGAITMLLTDRNFNTSFFDPAGGGDPILYQHLF 218
>UniRef50_Q6RJT8 Cluster: Cytochrome c oxidase subunit 2; n=1;
Harmonia axyridis|Rep: Cytochrome c oxidase subunit 2 -
Harmonia axyridis (Multicolored Asian lady beetle)
Length = 193
Score = 73.3 bits (172), Expect = 7e-12
Identities = 30/57 (52%), Positives = 36/57 (63%)
Frame = +1
Query: 142 TFILIFWTS*SLYFNFTRIWYNFSYYFTRKRKKRNFWLFRNNLCYTSNWVIRIHCLS 312
+ ++IFW+S SLYFN IWYNF YY+T K K W F NNLCY S W I +S
Sbjct: 2 SLVMIFWSSSSLYFNSPSIWYNFPYYYTSKSGKNCLWFFSNNLCYISYWTSSICSMS 58
>UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI5
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI5 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI5 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI5 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 536
Score = 72.9 bits (171), Expect = 1e-11
Identities = 33/49 (67%), Positives = 37/49 (75%)
Frame = +2
Query: 5 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF 151
A+ +TA AGAIT+LLTDRN NTSF+DPAGGGDPILYQHLF
Sbjct: 187 AIFVTAILLLLSLPVLAGAITMLLTDRNFNTSFYDPAGGGDPILYQHLF 235
>UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1;
Periclimenes thermohydrophilus|Rep: Cytochrome oxidase
subunit I - Periclimenes thermohydrophilus
Length = 217
Score = 70.9 bits (166), Expect = 4e-11
Identities = 34/48 (70%), Positives = 40/48 (83%)
Frame = -3
Query: 150 NKC*YKIGSPPPAGSKNDVFKFRSVNNIVIAPAKTGSDNNNKNAVIPT 7
NKC + IGSPPPAGSK +VFKFRSV +IVIAPA TGS++N+K AV T
Sbjct: 1 NKC-WSIGSPPPAGSKKEVFKFRSVKSIVIAPASTGSESNSKMAVSNT 47
>UniRef50_Q5VI63 Cluster: SoxB; n=3; Sulfolobaceae|Rep: SoxB -
Acidianus brierleyi
Length = 148
Score = 70.9 bits (166), Expect = 4e-11
Identities = 46/150 (30%), Positives = 73/150 (48%), Gaps = 5/150 (3%)
Frame = +2
Query: 155 FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVG 334
FFGHP VY + P FG + + I K+ F ++ HH+ T
Sbjct: 2 FFGHPVVYYVPFPLFGALYYYIPIY-AKRSLFSEKWARWNIFLLAIGSMLIWVHHLQTFP 60
Query: 335 IDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFL-----FTVG 499
+ +D RA+ T +T+++A +G+ + TI T Y+ LG FL F +G
Sbjct: 61 LPVDLRAWITVSTLVLASGSGLTVLNLGLTIL-TSKGYDYKD--PLGMTFLIALIGFIIG 117
Query: 500 GLTGVILANSSIDITLHDTYYVVAHFHYVL 589
G+ + L + I+ +H+TYYVV HFHY++
Sbjct: 118 GVQALPLPINIINGVVHNTYYVVGHFHYMV 147
>UniRef50_Q396U4 Cluster: Cytochrome c oxidase, subunit I; n=18;
Proteobacteria|Rep: Cytochrome c oxidase, subunit I -
Burkholderia sp. (strain 383) (Burkholderia cepacia
(strain ATCC 17760/ NCIB 9086 / R18194))
Length = 541
Score = 70.1 bits (164), Expect = 7e-11
Identities = 62/229 (27%), Positives = 103/229 (44%), Gaps = 23/229 (10%)
Frame = +2
Query: 164 HPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFT---VG 334
H VY ++P + II + G + + + HH+FT VG
Sbjct: 215 HAIVYFWLMPAYIAYYTIIPRAIGGR-LYSDAMARISFILFLVVSMPIGIHHLFTDPQVG 273
Query: 335 IDID-TRAYFTSATIIIAVPTGIKIFR*LATIH------GTQINY---------NPNIL* 466
++ FTS ++AVPT + IF A++ G + + NP +L
Sbjct: 274 AGFKFLQSVFTS---LVAVPTLLTIFTICASVEIAARLRGGKGTFGWLAALPWDNPQML- 329
Query: 467 RLGFVFLFT-VGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPL 643
L F F+ GG G+I + +D T+H+T ++ HFH + + + +P
Sbjct: 330 ALAFSFVMLGFGGAGGLINMSYQLDTTIHNTQWITGHFHLIFAGAIVTMYFAIAYDLWPH 389
Query: 644 FTGLSLNSY-ILKIQFFTIFIGVNITFFPQHFLGLAGIPRR--YSDYPD 781
TG +L +++ Q + FIG+ +T FP H++G+ G+PRR Y DY D
Sbjct: 390 LTGRALTHVRLMRWQLWLWFIGMIVTTFPWHWVGILGMPRRMAYYDYGD 438
>UniRef50_Q8LX82 Cluster: Cytochrome c oxidase subunit I; n=3;
Chaoborus|Rep: Cytochrome c oxidase subunit I -
Chaoborus obscuripes
Length = 206
Score = 68.9 bits (161), Expect = 2e-10
Identities = 46/124 (37%), Positives = 53/124 (42%)
Frame = +1
Query: 427 TWNSN*L*P*YFMKIRFCIFIHSRRINRCNFSQFFXXXXXXXXXXXXXXXXXXXXXXXXX 606
TWNSN +M I CIFIH + F
Sbjct: 31 TWNSNLFFSITYMGISICIFIHLLEDLQELFLLILLLMLFYMTLIMLCSFSLCFIYSSCF 90
Query: 607 CNYWGIY*LISFIYRPFIKFLYTKNSIFYNIYWSKYNIFSTTFFRFSWNTSTIFRLSRLI 786
CNY GIY L+ I K L KNSIFYNI+ K IFSTTFF S +T T+ S LI
Sbjct: 91 CNYIGIYSLMPLINSTNNKSLMIKNSIFYNIFSGKSYIFSTTFFSISSDTPTMLSFSSLI 150
Query: 787 YFMK 798
+K
Sbjct: 151 QLLK 154
Score = 50.8 bits (116), Expect = 4e-05
Identities = 24/28 (85%), Positives = 26/28 (92%)
Frame = +2
Query: 341 IDTRAYFTSATIIIAVPTGIKIFR*LAT 424
+DTRAYFTSAT+IIAVPTGIKIF LAT
Sbjct: 2 VDTRAYFTSATMIIAVPTGIKIFSWLAT 29
>UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4
precursor (DNA endonuclease I- SceII) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI4 (EC 3.1.-.-) (Intron-encoded
endonuclease I-SceII)]; n=4; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI4 precursor (DNA
endonuclease I- SceII) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI4 (EC 3.1.-.-) (Intron-encoded endonuclease I-SceII)]
- Saccharomyces cerevisiae (Baker's yeast)
Length = 556
Score = 68.5 bits (160), Expect = 2e-10
Identities = 32/62 (51%), Positives = 41/62 (66%)
Frame = +2
Query: 5 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYIL 184
++ ITAF + IT+LL DRN NTSFF+ +GGGDPILY+HLF FFG I+
Sbjct: 188 SIFITAFLLLLSLPVLSAGITMLLLDRNFNTSFFEVSGGGDPILYEHLFWFFGQTVATII 247
Query: 185 IL 190
+L
Sbjct: 248 ML 249
>UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein;
n=1; Saccharomyces castellii|Rep: I-SceII DNA
endonuclease-like protein - Saccharomyces castellii
(Yeast)
Length = 598
Score = 64.9 bits (151), Expect = 3e-09
Identities = 30/53 (56%), Positives = 36/53 (67%)
Frame = +2
Query: 5 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 163
A+ ITA + +T+LL DRN NTSFF+ AGGGDPILY+HLF FFG
Sbjct: 188 AILITAVLLLLTLPVLSAGVTMLLLDRNFNTSFFEVAGGGDPILYEHLFWFFG 240
>UniRef50_A5URU0 Cluster: Cytochrome c oxidase, subunit I; n=4;
Chloroflexaceae|Rep: Cytochrome c oxidase, subunit I -
Roseiflexus sp. RS-1
Length = 561
Score = 64.5 bits (150), Expect = 3e-09
Identities = 59/232 (25%), Positives = 99/232 (42%), Gaps = 17/232 (7%)
Frame = +2
Query: 119 GGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXX 298
G DP+L + LF F GHP VY +LP + + + Q+ G + F
Sbjct: 224 GTDPVLARTLFWFTGHPIVYFWLLPAYISWYNFVPQQAGGR-LFSDPMARVSFILFLILS 282
Query: 299 FIV*AHHIFT-VGIDIDTRAYFTSATIIIAVPTGIKIFR*LATI-HGTQIN--------- 445
+ HH +T GI + T + P+ + F +A++ +G +
Sbjct: 283 TPIGMHHQYTDPGISEIWKLVHAIFTFGVFFPSLLTFFNVVASLENGGRARGGKGWLVWV 342
Query: 446 YN-----PNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXX 610
+N P+ ++ + LF GG G+I A+ +I++ +H+T ++ HFH +
Sbjct: 343 FNLPWREPSFTTQVLAMILFAFGGAGGLINASYNINLVVHNTSWISGHFHLTVGTAVTLS 402
Query: 611 XXXXXXN*YPLFTGLSLNSYILK-IQFFTIFIGVNITFFPQHFLGLAGIPRR 763
P TG L S + +Q +T F+G+ I H LGL +PRR
Sbjct: 403 FMGITYWLVPHLTGRRLWSPTMALVQAWTWFVGMGIFSHWMHMLGLLSMPRR 454
>UniRef50_A3H8Y4 Cluster: Cytochrome-c oxidase precursor; n=1;
Caldivirga maquilingensis IC-167|Rep: Cytochrome-c
oxidase precursor - Caldivirga maquilingensis IC-167
Length = 529
Score = 64.1 bits (149), Expect = 4e-09
Identities = 52/227 (22%), Positives = 97/227 (42%), Gaps = 3/227 (1%)
Frame = +2
Query: 98 SFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXX 277
S +P G + L ++F FFGHP VY L+ P + +++ + ++
Sbjct: 242 STVNPNFGINVGLADNMFWFFGHPIVYQLLFPAVAAL-YLLFELGSNRDWLGYTVTGAIW 300
Query: 278 XXXXXXXFIV*AHHIFTVGID-IDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNP 454
+V HH++ + + +T+ I++ + + +F LA + + I P
Sbjct: 301 VLATVTNLLVWVHHLYLYPFEPLPVNLMSQLSTMGISIVSAVSVFALLAMMWRSGIKMTP 360
Query: 455 NIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN* 634
+ L +F + G +GV A + ++ LH+T +VVAHFH +
Sbjct: 361 PYMFSLIAMFAWLEAGYSGVAQAIVAWNLYLHNTLWVVAHFHTMALLNIAMVAIALIYYL 420
Query: 635 YP-LFTGLSLNSYILKIQFFTIFIGVNITFFPQHFL-GLAGIPRRYS 769
P + ++L K+ F+ +G F F G+ G+PRRY+
Sbjct: 421 VPKAYPWVNLYDKWSKVHFWMTLVG-GFGFVNTWFAEGVLGVPRRYA 466
>UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa
group|Rep: COX1-i5 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 608
Score = 63.7 bits (148), Expect = 6e-09
Identities = 31/62 (50%), Positives = 39/62 (62%)
Frame = +2
Query: 5 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYIL 184
AV TA A +T+ + DRN NTSFF+ AGGGD +LYQHLF ++ HPEV I+
Sbjct: 193 AVLFTAILLLLSLPVLAAGLTMGIFDRNFNTSFFEYAGGGDAVLYQHLFYWWNHPEVKII 252
Query: 185 IL 190
L
Sbjct: 253 CL 254
>UniRef50_P98004 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Cytochrome aa3 subunit
1) (Oxidase aa(3) subunit 1); n=5; Sulfolobaceae|Rep:
Quinol oxidase subunit 1 (EC 1.10.3.-) (Quinol oxidase
polypeptide I) (Cytochrome aa3 subunit 1) (Oxidase aa(3)
subunit 1) - Sulfolobus acidocaldarius
Length = 517
Score = 63.3 bits (147), Expect = 8e-09
Identities = 44/156 (28%), Positives = 73/156 (46%), Gaps = 3/156 (1%)
Frame = +2
Query: 131 ILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV* 310
+L+ LF F+GHP VY + P FG + + I Q G+ + V
Sbjct: 224 LLWAILFWFYGHPVVYYVPFPLFGALYYYIPQYAGRS-LYSEKWARWNIYLLAIGTMGVW 282
Query: 311 AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYN---PNIL*RLGFV 481
HH+ T + I R + +T+I+A +G+ + TI T Y+ P + L +
Sbjct: 283 VHHLQTWPLPIVLREWVNLSTLILATGSGLTVLNLGLTIF-TSRKYDWKDPVGMGALISL 341
Query: 482 FLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVL 589
F + G ++L +SI+ H++YYVV HFH ++
Sbjct: 342 IGFILAGAQALVLPENSINPLFHNSYYVVGHFHLMI 377
>UniRef50_Q6RCN4 Cluster: Cytochrome c oxidase subunit I; n=1;
Bucephalid sp. KH-2004|Rep: Cytochrome c oxidase subunit
I - Bucephalid sp. KH-2004
Length = 121
Score = 62.5 bits (145), Expect = 1e-08
Identities = 32/71 (45%), Positives = 46/71 (64%), Gaps = 1/71 (1%)
Frame = +2
Query: 302 IV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL-*RLGF 478
+V HH+F VG D+ T +F+S T+II VPTGIK+F L + ++ N I+ +GF
Sbjct: 26 VVWLHHMFMVGFDVKTAVFFSSVTMIIGVPTGIKVFGWLYMLGTSRHCLNTVIVWWIIGF 85
Query: 479 VFLFTVGGLTG 511
+FLFT+GG G
Sbjct: 86 IFLFTMGGRQG 96
>UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|Rep:
Cox-i3 protein - Candida stellata (Yeast)
Length = 588
Score = 62.1 bits (144), Expect = 2e-08
Identities = 31/64 (48%), Positives = 41/64 (64%), Gaps = 2/64 (3%)
Frame = +2
Query: 5 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH--PEVY 178
+V ITA A +T+LL DRN NTSFF +GGGDP+LY+H+F FFG P +
Sbjct: 205 SVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPLLYEHIFWFFGQIWPIII 264
Query: 179 ILIL 190
I+I+
Sbjct: 265 IIII 268
>UniRef50_Q981A5 Cluster: Heme bearing subunit I of the terminal
oxidase; n=8; Sulfolobaceae|Rep: Heme bearing subunit I
of the terminal oxidase - Sulfolobus solfataricus
Length = 593
Score = 61.3 bits (142), Expect = 3e-08
Identities = 54/224 (24%), Positives = 87/224 (38%), Gaps = 4/224 (1%)
Frame = +2
Query: 119 GGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXX 298
G DPI Q F FGH VY+ +P G + +++ K +
Sbjct: 233 GLDPIANQIAFWIFGHAIVYMAWVPAVGAL-YLLIPMLANKPLYSDRMGRISALLYLIFS 291
Query: 299 FIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGF 478
V HH++ V + I + T + +P+ + F AT G + +N +
Sbjct: 292 NNVPIHHLYMVNLPIALKLLQEVLTYSVVIPSMMTFFNLWATAKGADVKWNIITAWTVTS 351
Query: 479 VFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLS 658
G+TG+ A S D +H+T +VV HFH ++ Y + T +S
Sbjct: 352 FAGAIAAGVTGISNATISFDAIVHNTDWVVGHFHAMILFSIVPAAWAVL---YIMITMMS 408
Query: 659 LNSYILKIQFFTIFIG--VNITFFPQHF--LGLAGIPRRYSDYP 778
+ K + +IG + TF F +G G+ RR YP
Sbjct: 409 GRIWFSKGMAWLHYIGYMIGTTFLIVGFELIGFYGVVRRAEIYP 452
>UniRef50_Q8ZXC1 Cluster: Cytochrome C oxidase subunit I; n=3;
Pyrobaculum|Rep: Cytochrome C oxidase subunit I -
Pyrobaculum aerophilum
Length = 557
Score = 59.3 bits (137), Expect = 1e-07
Identities = 59/231 (25%), Positives = 93/231 (40%), Gaps = 18/231 (7%)
Frame = +2
Query: 125 DPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFI 304
D + ++ F FFGHP VY ++P I I+ + G E F
Sbjct: 206 DVLEWRLWFWFFGHPLVYFWLVPAVTIWYTILPRVLGT-EVFSKTAAKAAFMLYLIASVP 264
Query: 305 V*AHHIFT-VGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHG--------------TQ 439
V HH F G+ + T T ++AVP+ I F +AT+ T
Sbjct: 265 VGLHHQFVDPGVHPVYKYLHTVLTYLVAVPSFITAFNVIATLEKAGRMRGGKGLFGWITA 324
Query: 440 INYNPN-IL*RLGF-VFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXX 613
+ + + + + F + LF + G +GV+ A+ +++ +H+T +VV HFH +
Sbjct: 325 LPWGKDPVFTGITFAIILFGIAGFSGVVNASFNVNYNVHNTAWVVGHFHLTVGGGVTLTF 384
Query: 614 XXXXXN*YPLFTGLSLNSYILKIQFFTI-FIGVNITFFPQHFLGLAGIPRR 763
PL G + L I T+ F+G I H GL PRR
Sbjct: 385 IATSFLLVPLLFGRDYVAKKLLIAVPTLWFVGQLIFGIGYHVAGLLHAPRR 435
>UniRef50_Q604Y9 Cluster: Cytochrome c oxidase, subunit I; n=1;
Methylococcus capsulatus|Rep: Cytochrome c oxidase,
subunit I - Methylococcus capsulatus
Length = 537
Score = 58.0 bits (134), Expect = 3e-07
Identities = 33/108 (30%), Positives = 53/108 (49%), Gaps = 1/108 (0%)
Frame = +2
Query: 449 NPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXX 628
NP +L + + + +GG G++ A+ +++ +H+T +V HFH + +
Sbjct: 327 NPMVLAAILSLLMLVLGGFGGIVNASYAMNAMVHNTAWVPGHFHLIFAGTVITMYLAVAY 386
Query: 629 N*YPLFTGLSLNSYILK-IQFFTIFIGVNITFFPQHFLGLAGIPRRYS 769
+P G L S L +Q + FIG+ I P H LGL G PRR S
Sbjct: 387 KLWPELCGRRLYSVDLALVQLWGWFIGMVIMTTPWHILGLLGQPRRIS 434
>UniRef50_Q9TCU2 Cluster: Cytochrome c oxidase subunit I; n=1;
Taenia saginata|Rep: Cytochrome c oxidase subunit I -
Taenia saginata (Beef tapeworm)
Length = 147
Score = 56.8 bits (131), Expect = 7e-07
Identities = 24/50 (48%), Positives = 36/50 (72%)
Frame = +2
Query: 314 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL 463
HH+FTVG+D++T +F+S T+II VPTGIK+F L + +++N IL
Sbjct: 53 HHMFTVGLDVNTAVFFSSVTMIIRVPTGIKVFTWLYMLSNSRVNKXDPIL 102
>UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Aedes
cretinus|Rep: Cytochrome c oxidase subunit I - Aedes
cretinus
Length = 153
Score = 56.8 bits (131), Expect = 7e-07
Identities = 28/55 (50%), Positives = 31/55 (56%)
Frame = +1
Query: 1 MSCRDYSXXXXXXTTCFSWSYYNIINRSKLKYIIF*SCWRRRPNFISTFILIFWT 165
M C +Y TCFS S+Y IIN K KY IF W P +STFILIFWT
Sbjct: 98 MICCNYCYFITSFFTCFSSSHYYIINWPKSKYFIFWPNWSSSPYSLSTFILIFWT 152
>UniRef50_Q9KEW0 Cluster: Cytochrome c oxidase subunit I; n=8;
Bacillaceae|Rep: Cytochrome c oxidase subunit I -
Bacillus halodurans
Length = 564
Score = 55.2 bits (127), Expect = 2e-06
Identities = 60/229 (26%), Positives = 89/229 (38%), Gaps = 19/229 (8%)
Frame = +2
Query: 134 LYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*A 313
L + LF +FGHP VY +LP + I+ + G F V
Sbjct: 223 LSRTLFWYFGHPLVYFWLLPAYMAWYLIVPKLLGVN-VFSDSLARLAFILFLLFSIPVGF 281
Query: 314 HH-IFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LAT--IHG------------TQINY 448
HH GID + T T ++ +P+ + F A I G T++ +
Sbjct: 282 HHQAVDPGIDHFWKFLQTVLTFMVIIPSLMTAFSMFAVFEISGREKKGKGLFGWFTKLPW 341
Query: 449 NPNIL*RLGFVFLFTV-GGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXX 625
L LF + GG+ G+I A+ ++ +H+T +VV HFH +
Sbjct: 342 RDVRFLSLFLAMLFFIPGGIGGIINASFQLNEVVHNTLWVVGHFHITVGAPVAMTFYGLT 401
Query: 626 XN*YPLFTGLSLNSYILK---IQFFTIFIGVNITFFPQHFLGLAGIPRR 763
P TG + K IQ T +G+ + QH LGL G PRR
Sbjct: 402 FWLVPYLTGRPFSRLAKKLALIQVITWSLGMFLMSTAQHVLGLLGAPRR 450
>UniRef50_A2T428 Cluster: Putative uncharacterized protein ORF820;
n=1; Placozoan sp. BZ49|Rep: Putative uncharacterized
protein ORF820 - Placozoan sp. BZ49
Length = 820
Score = 54.8 bits (126), Expect = 3e-06
Identities = 23/30 (76%), Positives = 29/30 (96%)
Frame = +2
Query: 320 IFTVGIDIDTRAYFTSATIIIAVPTGIKIF 409
++ VG+D+DTRAYFT+AT+IIAVPTGIKIF
Sbjct: 1 MYVVGMDVDTRAYFTAATMIIAVPTGIKIF 30
>UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|Rep:
Cox-i2 protein - Candida stellata (Yeast)
Length = 586
Score = 54.8 bits (126), Expect = 3e-06
Identities = 32/67 (47%), Positives = 41/67 (61%)
Frame = +2
Query: 5 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYIL 184
+V ITA A +T+LL DRN NTSFF +GGGDP+LY+H+ F+ +P V IL
Sbjct: 205 SVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPLLYEHI--FYKNP-VLIL 261
Query: 185 ILPGFGI 205
I GI
Sbjct: 262 IWLTSGI 268
>UniRef50_A7D123 Cluster: Cytochrome-c oxidase; n=1; Halorubrum
lacusprofundi ATCC 49239|Rep: Cytochrome-c oxidase -
Halorubrum lacusprofundi ATCC 49239
Length = 597
Score = 53.2 bits (122), Expect = 8e-06
Identities = 52/233 (22%), Positives = 96/233 (41%), Gaps = 17/233 (7%)
Frame = +2
Query: 125 DPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFI 304
+P L + LF FFGHP VY ++P + + ++ + G + F
Sbjct: 223 NPTLTRTLFWFFGHPVVYFWLMPAYLLWYTVLPKIAGGR-LFSDPLARVVFVLFLLLSTP 281
Query: 305 V*AHHIFT-VGIDIDTRAYFTSATIIIAVPTGIKIFR*LATI-HGTQINYNPNIL*RL-- 472
V HH + GI + + T+ + +P+ + F +A++ +G + +L L
Sbjct: 282 VGIHHQYLDPGIAEGFKFISMTNTMFLLLPSLLTAFTVVASVEYGARQRGGTGLLGWLTD 341
Query: 473 ---------GFVF---LFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXX 616
G + +F GG +G++ A +I+ +H+T +V HFH +
Sbjct: 342 LPWRKPEFTGMMLAGLMFAAGGFSGMVNAGMNINYMIHNTIWVPGHFHLTVGTAVALTFM 401
Query: 617 XXXXN*YPLFTGLSLNSYILKI-QFFTIFIGVNITFFPQHFLGLAGIPRRYSD 772
+P T + S + + Q FIG+ + H G+ G PRR ++
Sbjct: 402 AATYWIWPQITNKPIYSRSIGLFQVVLWFIGMALMSNAMHAQGILGAPRRTAE 454
>UniRef50_O99652 Cluster: Cytochrome c oxidase subunit I; n=1;
Tetragona dorsalis ziegleri|Rep: Cytochrome c oxidase
subunit I - Tetragona dorsalis ziegleri
Length = 111
Score = 52.8 bits (121), Expect = 1e-05
Identities = 27/62 (43%), Positives = 35/62 (56%)
Frame = +2
Query: 5 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYIL 184
++ IT AG IT+LL+DRN N FF GG PIL+Q++ FGH +V L
Sbjct: 20 SISITVNLSILSLPMLAGTITMLLSDRNFNKFFFILIGGEYPILHQYMLWLFGHTDVLFL 79
Query: 185 IL 190
IL
Sbjct: 80 IL 81
>UniRef50_Q9YBH5 Cluster: Cytochrome c oxidase (Ba3-type) subunit I;
n=1; Aeropyrum pernix|Rep: Cytochrome c oxidase
(Ba3-type) subunit I - Aeropyrum pernix
Length = 548
Score = 51.2 bits (117), Expect = 3e-05
Identities = 47/170 (27%), Positives = 71/170 (41%), Gaps = 18/170 (10%)
Frame = +2
Query: 125 DPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFI 304
D +L + LF +FGHP VY +LP + + I + G F
Sbjct: 207 DVLLARTLFWWFGHPLVYFWLLPAVALWYYAIPRILGVP-LFSETMAKVAYILYMIASTP 265
Query: 305 V*AHHIFT-VGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFV 481
V HH F GI + T T ++A P+ + F LAT+ L +G+V
Sbjct: 266 VGLHHQFVDPGIGPFFKLVHTLVTFVVATPSMLTAFNILATLERAGRMRGGRGL--VGWV 323
Query: 482 F-----------------LFTVGGLTGVILANSSIDITLHDTYYVVAHFH 580
F LF GG+TG+I A+ ++ +H+T ++V HFH
Sbjct: 324 FKLPWGSLAFSGLMLPIILFANGGITGIINASFQLNTVVHNTTWIVGHFH 373
>UniRef50_O07289 Cluster: Subunit I-homologue of cytochrome oxidase;
n=6; cellular organisms|Rep: Subunit I-homologue of
cytochrome oxidase - Natronomonas pharaonis
(Natronobacterium pharaonis)
Length = 581
Score = 48.8 bits (111), Expect = 2e-04
Identities = 26/97 (26%), Positives = 43/97 (44%), Gaps = 1/97 (1%)
Frame = +2
Query: 485 LFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSL- 661
+F +G++ A +I+ +H+T++VV HFH + P TG L
Sbjct: 350 MFAAAAFSGMVNAGMNINYLVHNTWWVVGHFHLTVGTAVALTFMAVSYWFLPQITGKKLW 409
Query: 662 NSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSD 772
+ Q F+G+ H GLAG+PRR ++
Sbjct: 410 GKSVALAQVVLWFVGMTFMSNAMHRSGLAGMPRRTAE 446
>UniRef50_Q7YI87 Cluster: Cytochrome oxidase subunit I; n=1;
Celatoblatta vulgaris|Rep: Cytochrome oxidase subunit I
- Celatoblatta vulgaris
Length = 134
Score = 48.4 bits (110), Expect = 2e-04
Identities = 25/51 (49%), Positives = 29/51 (56%)
Frame = +1
Query: 1 MSCRDYSXXXXXXTTCFSWSYYNIINRSKLKYIIF*SCWRRRPNFISTFIL 153
M C +YS +TC WSYYN IN SKLKYI+F F+ST IL
Sbjct: 84 MICSNYSFTIIIVSTCSCWSYYNTINWSKLKYILFWPSSSWGSYFMSTPIL 134
>UniRef50_Q28SZ6 Cluster: Cytochrome c oxidase subunit I; n=1;
Jannaschia sp. CCS1|Rep: Cytochrome c oxidase subunit I
- Jannaschia sp. (strain CCS1)
Length = 155
Score = 46.8 bits (106), Expect = 7e-04
Identities = 30/104 (28%), Positives = 45/104 (43%), Gaps = 2/104 (1%)
Frame = +2
Query: 512 VILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILK--IQ 685
+ L+ D T HDTYYVVAH HY+ Y L S+ + +
Sbjct: 29 IALSQPGADGTYHDTYYVVAHIHYL---GLLALLVVAVGTAYVLLLRRSVPRIAVSGAVA 85
Query: 686 FFTIFIGVNITFFPQHFLGLAGIPRRYSDYPDSYIS*NIIXSLG 817
+ +G PQ L G+PRRY+DY D+ ++ ++G
Sbjct: 86 ICMLCLGTAFMVAPQAVLPGGGMPRRYTDYADAVERWQMLSAIG 129
>UniRef50_Q9MFX8 Cluster: Cytochrome oxidase I; n=5; Echinometra
lucunter|Rep: Cytochrome oxidase I - Echinometra
lucunter
Length = 199
Score = 46.4 bits (105), Expect = 0.001
Identities = 23/62 (37%), Positives = 31/62 (50%)
Frame = +1
Query: 142 TFILIFWTS*SLYFNFTRIWYNFSYYFTRKRKKRNFWLFRNNLCYTSNWVIRIHCLSSSY 321
T ILI W S+Y F IW +F+ T FW+ N L + SNW I C+S +
Sbjct: 1 TPILILWPPSSIYSYFAGIWNDFARNRTLFSNASTFWVPGNGLRHDSNWSPSIPCMSPPH 60
Query: 322 IH 327
+H
Sbjct: 61 VH 62
>UniRef50_O67937 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 592
Score = 46.0 bits (104), Expect = 0.001
Identities = 44/177 (24%), Positives = 78/177 (44%), Gaps = 25/177 (14%)
Frame = +2
Query: 125 DPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKK-ETFXXXXXXXXXXXXXXXXF 301
+P+L + LF FFGHP VY +LP + + I+ + +K + +
Sbjct: 209 NPLLARTLFWFFGHPVVYFWLLPAYVALYTILPKIVSEKGKLYSDPAARLAFILFLIFSL 268
Query: 302 IV*AHHIFT-VGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNI------ 460
V HH FT GI + T +A+P+ I F ++ + +P +
Sbjct: 269 PVGLHHQFTDPGITNTWKLIHALFTFGVALPSMITAFTVATSLEYSVKAEHPELKNSKFY 328
Query: 461 ------L*RL-GFVFLFT----------VGGLTGVILANSSIDITLHDTYYVVAHFH 580
RL G ++F+ +GG+TG++ A+ ++++ +H+T YV HFH
Sbjct: 329 WWTFLPFMRLEGNKWMFSYFFAGLVLFFIGGITGIVNASYNVNLVVHNTAYVPGHFH 385
>UniRef50_Q2VQT0 Cluster: Heme-copper oxygen reductase; n=1;
Rhodothermus marinus|Rep: Heme-copper oxygen reductase -
Rhodothermus marinus (Rhodothermus obamensis)
Length = 561
Score = 46.0 bits (104), Expect = 0.001
Identities = 55/230 (23%), Positives = 93/230 (40%), Gaps = 17/230 (7%)
Frame = +2
Query: 125 DPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFI 304
DP+L + LF F GH VY +LP + ++ ++ G K
Sbjct: 223 DPLLTRTLFWFTGHAIVYAWLLPAYVSWYALVPRQAGGK-IVSDSLTRLVFILFLLLSIP 281
Query: 305 V*AHHIFT-VGIDIDTRAYFTSATIIIAVPTGIKIFR*LATI------HGTQ--INY--- 448
HH +T GI + T + P+ I F +A++ HG + + +
Sbjct: 282 TGFHHQYTDPGIHEGFKFVHAILTFGVFFPSLITAFSVMASLEMGGRAHGGRGLLGWIPK 341
Query: 449 ----NPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXX 616
+P++ +L + F GG+TG+I A+ +++ +H+T +V HFH +
Sbjct: 342 LPWGDPSLSAQLLAMITFVFGGITGLINASFTMNQVVHNTTWVPGHFHMTVGSAVAMTFM 401
Query: 617 XXXXN*YPLFTGLSLNSYILKIQFFTIF-IGVNITFFPQHFLGLAGIPRR 763
P TG L + + I+ IG+ I GL G+PRR
Sbjct: 402 GVAYWMVPYLTGKKLWGRKVALASNWIYTIGLLIFARGMISAGLEGMPRR 451
>UniRef50_Q9B9T9 Cluster: Cytochrome oxidase subunit 1; n=7;
Locustacarus buchneri|Rep: Cytochrome oxidase subunit 1
- Locustacarus buchneri
Length = 185
Score = 44.0 bits (99), Expect = 0.005
Identities = 29/92 (31%), Positives = 43/92 (46%)
Frame = +1
Query: 13 DYSXXXXXXTTCFSWSYYNIINRSKLKYIIF*SCWRRRPNFISTFILIFWTS*SLYFNFT 192
+Y+ TT S S +N N SKL++I+ S PN I ILI T L+ N T
Sbjct: 94 NYNNTTDYFTTSSSRSNHNTTNSSKLQHILLRSFGGSGPNPIPASILILRTPSGLHSNST 153
Query: 193 RIWYNFSYYFTRKRKKRNFWLFRNNLCYTSNW 288
I ++ +K N ++NNL ++ W
Sbjct: 154 SIRNRITHLHNIFSQKSNILYYKNNLRHSIYW 185
>UniRef50_Q9TAP7 Cluster: Cytochrome oxidase subunit 1; n=1;
Clonorchis sinensis|Rep: Cytochrome oxidase subunit 1 -
Clonorchis sinensis
Length = 120
Score = 42.7 bits (96), Expect = 0.012
Identities = 23/44 (52%), Positives = 29/44 (65%)
Frame = -3
Query: 435 VPCIVASHLKILIPVGTAIIIVAEVKYARVSISIPTVNI**AQT 304
VP + +H K LIPVGT +I+V E+K V S PTVN+ AQT
Sbjct: 51 VPASMYNHEKTLIPVGTPMIMVTELKKTAVPKSSPTVNMWWAQT 94
>UniRef50_Q2W549 Cluster: Heme/copper-type cytochrome/quinol
oxidase, subunit 1; n=3; Magnetospirillum|Rep:
Heme/copper-type cytochrome/quinol oxidase, subunit 1 -
Magnetospirillum magneticum (strain AMB-1 / ATCC 700264)
Length = 560
Score = 42.3 bits (95), Expect = 0.016
Identities = 25/102 (24%), Positives = 44/102 (43%), Gaps = 1/102 (0%)
Frame = +2
Query: 470 LGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFT 649
L + +GG++GV + I+I +H+T YV HFH ++ P+
Sbjct: 351 LSLILFGFLGGISGVTMGVEQINIMIHNTIYVPGHFHATVAAGTTLAFMAITYFLVPVLF 410
Query: 650 GLSL-NSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSD 772
G L + K+Q + +G+ + G G+ RR+ D
Sbjct: 411 GRELILPGLAKLQPYLFGLGMGVFSLFMMGAGTLGVSRRHWD 452
>UniRef50_Q8HN76 Cluster: Cytochrome c oxidase subunit I; n=21;
Aphidomorpha|Rep: Cytochrome c oxidase subunit I -
Phylloxera sp. DAD-2001a
Length = 83
Score = 41.9 bits (94), Expect = 0.021
Identities = 16/26 (61%), Positives = 23/26 (88%)
Frame = +2
Query: 740 GLAGIPRRYSDYPDSYIS*NIIXSLG 817
GL G+PRRYSDYP++Y++ NI+ S+G
Sbjct: 1 GLNGMPRRYSDYPNNYLTWNIMSSIG 26
>UniRef50_Q6RHX4 Cluster: Cytochrome c oxidase subunit I; n=26;
Endopterygota|Rep: Cytochrome c oxidase subunit I -
Partamona helleri
Length = 88
Score = 37.1 bits (82), Expect = 0.59
Identities = 15/22 (68%), Positives = 17/22 (77%)
Frame = +2
Query: 752 IPRRYSDYPDSYIS*NIIXSLG 817
+PRRYSDYPDSY N I S+G
Sbjct: 2 MPRRYSDYPDSYYCWNFISSMG 23
>UniRef50_Q3INR3 Cluster: Cytochrome-c-like terminal oxidase,
subunit I 3; n=1; Natronomonas pharaonis DSM 2160|Rep:
Cytochrome-c-like terminal oxidase, subunit I 3 -
Natronomonas pharaonis (strain DSM 2160 / ATCC 35678)
Length = 575
Score = 37.1 bits (82), Expect = 0.59
Identities = 24/84 (28%), Positives = 40/84 (47%), Gaps = 8/84 (9%)
Frame = +2
Query: 353 AYFTSATIIIAVPTGIKIFR*LATIHGTQINY-------NPNIL*RLGFVFLFT-VGGLT 508
A F S A+P G++ R + G + NP + + LF +GG+T
Sbjct: 316 AAFASMIHAFAIPAGLEAGRRQRGLGGGLFGWLTSGPWKNPVFSATIFSIILFGFMGGIT 375
Query: 509 GVILANSSIDITLHDTYYVVAHFH 580
GV++ +++T H+T+ V HFH
Sbjct: 376 GVLMGQLQLNMTWHNTFATVGHFH 399
>UniRef50_Q9EMW4 Cluster: AMV085; n=1; Amsacta moorei entomopoxvirus
'L'|Rep: AMV085 - Amsacta moorei entomopoxvirus (AmEPV)
Length = 204
Score = 34.7 bits (76), Expect = 3.1
Identities = 16/57 (28%), Positives = 33/57 (57%)
Frame = +1
Query: 619 GIY*LISFIYRPFIKFLYTKNSIFYNIYWSKYNIFSTTFFRFSWNTSTIFRLSRLIY 789
G+Y +I Y+ + LY K IF +I++ KYN++ + + +N + F +++ I+
Sbjct: 18 GLYDIIP--YKASLSILYNKKIIFNDIFFIKYNLYESRVDKKKFNNAISFLMNKNIF 72
>UniRef50_Q2Y5N3 Cluster: Integral membrane proteins containing
uncharacterized repeats-like precursor; n=3;
Nitrosospira multiformis ATCC 25196|Rep: Integral
membrane proteins containing uncharacterized
repeats-like precursor - Nitrosospira multiformis
(strain ATCC 25196 / NCIMB 11849)
Length = 433
Score = 34.7 bits (76), Expect = 3.1
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = +2
Query: 167 PEVYILILPGFGIISHIISQERGKK 241
PE+Y LILPG G++ I Q++ KK
Sbjct: 407 PEIYALILPGLGLVGFIARQKKAKK 431
>UniRef50_Q56408 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome c ba(3) subunit I); n=4; Deinococci|Rep:
Cytochrome c oxidase subunit 1 (EC 1.9.3.1) (Cytochrome
c oxidase polypeptide I) (Cytochrome c ba(3) subunit I)
- Thermus thermophilus
Length = 108
Score = 33.5 bits (73), Expect = 7.2
Identities = 20/88 (22%), Positives = 38/88 (43%), Gaps = 3/88 (3%)
Frame = +2
Query: 488 FTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNS 667
F GG G++ A+ ++D +H+T +V HFH ++ P TG ++
Sbjct: 21 FIPGGAGGIVNASFTLDYVVHNTAWVPGHFHLQVASLVTLTAMGSLYWLLPNLTGKPISD 80
Query: 668 YILKIQFFTI---FIGVNITFFPQHFLG 742
++ + F+G+ I H+ G
Sbjct: 81 AQRRLGLAVVWLWFLGMMIMAVGLHWAG 108
>UniRef50_Q48874 Cluster: SakB; n=2; Lactobacillus sakei|Rep: SakB -
Lactobacillus sakei
Length = 430
Score = 33.1 bits (72), Expect = 9.6
Identities = 22/67 (32%), Positives = 35/67 (52%)
Frame = +1
Query: 118 RRRPNFISTFILIFWTS*SLYFNFTRIWYNFSYYFTRKRKKRNFWLFRNNLCYTSNWVIR 297
RRR FI+ F I + +LY + + + S YF K KK N +L N+L + + +
Sbjct: 35 RRRVLFIAVFFPITFLV-ALYSDISNVIPILSGYFILKEKKENDYLLLNDLLFCTFIIFG 93
Query: 298 IHCLSSS 318
+ LSS+
Sbjct: 94 CNVLSSN 100
>UniRef50_Q5CTJ9 Cluster: Cation-transporting ATPase; n=2;
Cryptosporidium|Rep: Cation-transporting ATPase -
Cryptosporidium parvum Iowa II
Length = 1434
Score = 33.1 bits (72), Expect = 9.6
Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Frame = +1
Query: 145 FILIFWT--S*SLYFNFTRIWYNFSYYFTRKRKKRNFWLFRNNLCYTSNWVIRIHCLSSS 318
+I+ FW+ S SLYFN + N + T KK N L + +C+ + + S +
Sbjct: 558 YIIPFWSTSSMSLYFNNAIKYLNSEHILTTNPKKLNQLLLVDTICFDKTGTLTVPTFSIN 617
Query: 319 YIH 327
+H
Sbjct: 618 NVH 620
>UniRef50_A5I8K9 Cluster: Putative uncharacterized protein; n=1;
Tribolium castaneum|Rep: Putative uncharacterized
protein - Tribolium castaneum (Red flour beetle)
Length = 102
Score = 33.1 bits (72), Expect = 9.6
Identities = 31/102 (30%), Positives = 36/102 (35%)
Frame = +1
Query: 463 MKIRFCIFIHSRRINRCNFSQFFXXXXXXXXXXXXXXXXXXXXXXXXXCNYWGIY*LISF 642
M R CI I S R N NFS+F I LI
Sbjct: 1 MSTRICIPISSGRTNGSNFSKFINCHYTSGHLLGSSSLPLRSFYRSRIRYQGRISSLILP 60
Query: 643 IYRPFIKFLYTKNSIFYNIYWSKYNIFSTTFFRFSWNTSTIF 768
IY K + +I +I SK NI S+ F R N TIF
Sbjct: 61 IYGLSTKPKIMQGAISNHIQGSKPNILSSAFPRLKRNARTIF 102
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 581,708,722
Number of Sequences: 1657284
Number of extensions: 10654124
Number of successful extensions: 26686
Number of sequences better than 10.0: 131
Number of HSP's better than 10.0 without gapping: 25333
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26507
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 78702453312
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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