Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P28_F_P18
(938 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC18.11c |sdc1||Dpy-30 domain protein|Schizosaccharomyces pomb... 51 2e-07
SPAC1A6.06c |meu31||sequence orphan|Schizosaccharomyces pombe|ch... 31 0.23
SPBC31E1.01c |atg2|mug36, SPBC660.18c|autophagy associated prote... 28 1.7
SPBC1348.07 |||S. pombe specific DUF999 protein family 6|Schizos... 28 1.7
SPBPB2B2.14c |||S. pombe specific DUF999 protein family 8|Schizo... 28 1.7
SPBC28E12.05 |esf2|SPBC3H7.17c|U3 snoRNP-associated protein Esf2... 27 2.9
SPAC10F6.01c ||SPAC4C5.05c|sulfite reductase beta subunit |Schiz... 26 6.7
SPBC839.08c |its8||pig-N |Schizosaccharomyces pombe|chr 2|||Manual 26 6.7
SPAC977.06 |||S. pombe specific DUF999 family protein 3|Schizosa... 26 8.8
SPCC970.11c |wtf9||wtf element, Wtf2, pseudo|Schizosaccharomyces... 26 8.8
SPCC794.02 |wtf5||wtf element Wtf5|Schizosaccharomyces pombe|chr... 26 8.8
SPCC1450.08c |wtf16||wtf element Wtf16|Schizosaccharomyces pombe... 26 8.8
SPCC1183.10 |wtf10||wtf element Wtf10|Schizosaccharomyces pombe|... 26 8.8
>SPCC18.11c |sdc1||Dpy-30 domain protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 109
Score = 51.2 bits (117), Expect = 2e-07
Identities = 19/41 (46%), Positives = 31/41 (75%)
Frame = +2
Query: 239 NALPTRQYLDQTVVPILLQGLSALAKERPPDPINYLAAYLL 361
N+ P RQYL++ V P+LL+G+ LA++RP +P+ +L +LL
Sbjct: 3 NSAPARQYLNEKVTPVLLEGMKILARDRPENPLQFLGQFLL 43
>SPAC1A6.06c |meu31||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 185
Score = 31.1 bits (67), Expect = 0.23
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = -2
Query: 658 IDYIFSFCQL*CTYAYYKANWYIFSSLLNNRTI 560
ID FS C CT Y+ N Y+ +LN R +
Sbjct: 81 IDAFFSMCLRSCTIIYFSMNPYMLCEILNARNV 113
>SPBC31E1.01c |atg2|mug36, SPBC660.18c|autophagy associated protein
Mug36|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1646
Score = 28.3 bits (60), Expect = 1.7
Identities = 10/30 (33%), Positives = 20/30 (66%)
Frame = +2
Query: 215 NRKSRIDLNALPTRQYLDQTVVPILLQGLS 304
NR+ R++ + LP + Y+DQ + L++ L+
Sbjct: 1333 NRELRLEFSVLPCKMYIDQDTLDFLIRFLT 1362
>SPBC1348.07 |||S. pombe specific DUF999 protein family
6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 230
Score = 28.3 bits (60), Expect = 1.7
Identities = 12/39 (30%), Positives = 24/39 (61%), Gaps = 4/39 (10%)
Frame = -2
Query: 499 KMFPVIALRLATFIVCIIIK----LYLCLWVCWLIIVIA 395
K P+I++ +A +V I + LY+C W+ + I+++A
Sbjct: 147 KAIPLISIVIAAVVVIIAVAMVKILYICHWLIYKILILA 185
>SPBPB2B2.14c |||S. pombe specific DUF999 protein family
8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 230
Score = 28.3 bits (60), Expect = 1.7
Identities = 12/39 (30%), Positives = 24/39 (61%), Gaps = 4/39 (10%)
Frame = -2
Query: 499 KMFPVIALRLATFIVCIIIK----LYLCLWVCWLIIVIA 395
K P+I++ +A +V I + LY+C W+ + I+++A
Sbjct: 147 KAIPLISIVIAAVVVIIAVAMVKILYICHWLIYKILILA 185
>SPBC28E12.05 |esf2|SPBC3H7.17c|U3 snoRNP-associated protein Esf2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 334
Score = 27.5 bits (58), Expect = 2.9
Identities = 12/36 (33%), Positives = 23/36 (63%)
Frame = +2
Query: 125 NHNKEEQSTTKIPDSVKKIILMEKDNEANANRKSRI 232
+ N+ ++ TTK +S+KKI L E + + A ++S +
Sbjct: 88 SENELDEETTKNANSIKKISLEEVEKQRKAIKRSGV 123
>SPAC10F6.01c ||SPAC4C5.05c|sulfite reductase beta subunit
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1473
Score = 26.2 bits (55), Expect = 6.7
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +2
Query: 149 TTKIPDSVKKIILMEKDNEANANRK 223
T KI + VK I+++++DN NRK
Sbjct: 1165 TDKIMEVVKAILIVQRDNGDRENRK 1189
>SPBC839.08c |its8||pig-N |Schizosaccharomyces pombe|chr 2|||Manual
Length = 935
Score = 26.2 bits (55), Expect = 6.7
Identities = 12/39 (30%), Positives = 22/39 (56%)
Frame = -1
Query: 509 SVQQNVSSHCFEISYFHCLHYNKAILMFVGLLVDYCYCL 393
SV ++ S +EI+ HC H+++ +L + L Y + L
Sbjct: 409 SVIADIESGEYEIAIEHCFHFSQTVLSGLRYLQRYDWLL 447
>SPAC977.06 |||S. pombe specific DUF999 family protein
3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 189
Score = 25.8 bits (54), Expect = 8.8
Identities = 10/32 (31%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = -2
Query: 499 KMFPVIALRLATFIVCIIIKLYLCLWVC-WLI 407
K P+I++ +A +V I + + L++C WL+
Sbjct: 147 KAIPLISIVIAAVVVIIAVAMVKILYICHWLL 178
>SPCC970.11c |wtf9||wtf element, Wtf2, pseudo|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 333
Score = 25.8 bits (54), Expect = 8.8
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = -3
Query: 819 CMKAIIFLXFYYSLWTE 769
C A+IFL ++Y WT+
Sbjct: 120 CTLALIFLTYFYETWTK 136
>SPCC794.02 |wtf5||wtf element Wtf5|Schizosaccharomyces pombe|chr
3|||Manual
Length = 269
Score = 25.8 bits (54), Expect = 8.8
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = -3
Query: 819 CMKAIIFLXFYYSLWTE 769
C A+IFL ++Y WT+
Sbjct: 120 CTLALIFLTYFYETWTK 136
>SPCC1450.08c |wtf16||wtf element Wtf16|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 349
Score = 25.8 bits (54), Expect = 8.8
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = -3
Query: 819 CMKAIIFLXFYYSLWTE 769
C A+IFL ++Y WT+
Sbjct: 120 CTLALIFLTYFYETWTK 136
>SPCC1183.10 |wtf10||wtf element Wtf10|Schizosaccharomyces pombe|chr
3|||Manual
Length = 258
Score = 25.8 bits (54), Expect = 8.8
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = -3
Query: 819 CMKAIIFLXFYYSLWTE 769
C A+IFL ++Y WT+
Sbjct: 120 CTLALIFLTYFYETWTK 136
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,618,713
Number of Sequences: 5004
Number of extensions: 72688
Number of successful extensions: 168
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 157
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 166
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 477327454
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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