Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_F_P15
         (460 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q5ZNY3 Cluster: Putative uncharacterized protein; n=4; ...    32   6.8  
UniRef50_Q2S801 Cluster: Uncharacterized protein conserved in ba...    32   6.8  
UniRef50_Q54PU7 Cluster: Putative uncharacterized protein; n=1; ...    31   9.0  

>UniRef50_Q5ZNY3 Cluster: Putative uncharacterized protein; n=4;
           Bracovirus|Rep: Putative uncharacterized protein -
           Cotesia congregata bracovirus
          Length = 1091

 Score = 31.9 bits (69), Expect = 6.8
 Identities = 17/40 (42%), Positives = 24/40 (60%)
 Frame = -1

Query: 298 NFKSFAISLHPQDLVHTRPTSVLSASF*VLDSVKVSSYLY 179
           N +S A     + LVH  P   LS S+  LDS+K+S++LY
Sbjct: 321 NVRSLANVDDHKQLVHDVPCQKLSTSYEGLDSLKISAHLY 360


>UniRef50_Q2S801 Cluster: Uncharacterized protein conserved in
           bacteria; n=1; Hahella chejuensis KCTC 2396|Rep:
           Uncharacterized protein conserved in bacteria - Hahella
           chejuensis (strain KCTC 2396)
          Length = 90

 Score = 31.9 bits (69), Expect = 6.8
 Identities = 13/32 (40%), Positives = 20/32 (62%)
 Frame = -2

Query: 141 AVPTAYKIGLTFTLSRTLRNSH*AHSTIHYCN 46
           ++ T + I  T TLS+T+R+ H +H  IH  N
Sbjct: 46  SISTLFLISSTITLSKTMRDEHESHRLIHKIN 77


>UniRef50_Q54PU7 Cluster: Putative uncharacterized protein; n=1;
            Dictyostelium discoideum AX4|Rep: Putative
            uncharacterized protein - Dictyostelium discoideum AX4
          Length = 995

 Score = 31.5 bits (68), Expect = 9.0
 Identities = 19/58 (32%), Positives = 31/58 (53%)
 Frame = -1

Query: 328  LYNFRAYNNNNFKSFAISLHPQDLVHTRPTSVLSASF*VLDSVKVSSYLYGMRSFAYV 155
            L  +++ NNNN  S + S    DL+ T+PTS     F   +SV+V+  ++G   F  +
Sbjct: 922  LKQYQSSNNNNSNSNSSSNDDDDLILTKPTSFSRRLF---NSVEVAFSIFGFLVFILI 976


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 310,152,106
Number of Sequences: 1657284
Number of extensions: 5128753
Number of successful extensions: 10934
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 10721
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10934
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 24351434270
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)