Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_F_P15
         (460 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    22   2.4  
AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain tran...    22   2.4  
AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain tran...    22   2.4  
AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.          22   2.4  
AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.           22   2.4  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    20   9.6  
AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    20   9.6  
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    20   9.6  

>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 22.2 bits (45), Expect = 2.4
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = -1

Query: 322 NFRAYNNNNFKS 287
           NF+ Y+NNNF +
Sbjct: 145 NFQQYDNNNFSA 156


>AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain
           transcription factor Fushitarazu protein.
          Length = 290

 Score = 22.2 bits (45), Expect = 2.4
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = -1

Query: 322 NFRAYNNNNFKS 287
           NF+ Y+NNNF +
Sbjct: 145 NFQQYDNNNFSA 156


>AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain
           transcription factor Zen2 protein.
          Length = 243

 Score = 22.2 bits (45), Expect = 2.4
 Identities = 11/35 (31%), Positives = 17/35 (48%)
 Frame = +2

Query: 143 PLAANVGKRSHSIQI*ANFYAIENSKTRTKYTGRP 247
           P  A+ GKR+ +    +    +E    R+KY  RP
Sbjct: 79  PKGASNGKRARTAYTSSQLVELEREFHRSKYLCRP 113


>AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.
          Length = 292

 Score = 22.2 bits (45), Expect = 2.4
 Identities = 11/35 (31%), Positives = 17/35 (48%)
 Frame = +2

Query: 143 PLAANVGKRSHSIQI*ANFYAIENSKTRTKYTGRP 247
           P  A+ GKR+ +    +    +E    R+KY  RP
Sbjct: 99  PKGASNGKRARTAYTSSQLVELEREFHRSKYLCRP 133


>AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.
          Length = 290

 Score = 22.2 bits (45), Expect = 2.4
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = -1

Query: 322 NFRAYNNNNFKS 287
           NF+ Y+NNNF +
Sbjct: 145 NFQQYDNNNFSA 156


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 20.2 bits (40), Expect = 9.6
 Identities = 7/24 (29%), Positives = 15/24 (62%)
 Frame = +2

Query: 116 PILYAVGTAPLAANVGKRSHSIQI 187
           P+L +  + P++ +  +R HSI +
Sbjct: 218 PVLASYKSVPMSFSSPRRRHSINL 241


>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 20.2 bits (40), Expect = 9.6
 Identities = 5/10 (50%), Positives = 8/10 (80%)
 Frame = -2

Query: 336 YSCYTIFEPI 307
           +SCYT+  P+
Sbjct: 76  FSCYTVLAPV 85


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 20.2 bits (40), Expect = 9.6
 Identities = 5/12 (41%), Positives = 11/12 (91%)
 Frame = -2

Query: 72  AHSTIHYCNYLN 37
           ++ST+H+ NY++
Sbjct: 209 SYSTLHFVNYID 220


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,464
Number of Sequences: 336
Number of extensions: 1346
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10511300
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)