Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_F_P15
         (460 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF588468-1|ABQ96704.1|  176|Anopheles gambiae transposase protein.     23   6.8  
AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein p...    22   9.0  

>EF588468-1|ABQ96704.1|  176|Anopheles gambiae transposase protein.
          Length = 176

 Score = 22.6 bits (46), Expect = 6.8
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = -1

Query: 319 FRAYNNNNFKSFAISLHPQDLVHTR 245
           F    + NFK F  +L+P  ++ TR
Sbjct: 122 FNLVESENFKKFFYTLNPNYIMPTR 146


>AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein
            protein.
          Length = 1077

 Score = 22.2 bits (45), Expect = 9.0
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +2

Query: 155  NVGKRSHSIQI*ANF 199
            N GKRSH + + AN+
Sbjct: 1042 NAGKRSHILSLFANY 1056


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 344,981
Number of Sequences: 2352
Number of extensions: 4967
Number of successful extensions: 5
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 39544623
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)