Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P28_F_P12
(925 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC006762-4|AAU20835.1| 484|Caenorhabditis elegans Hypothetical ... 87 1e-17
AC006762-3|AAU20834.1| 614|Caenorhabditis elegans Hypothetical ... 87 1e-17
AC006762-1|AAU87813.1| 514|Caenorhabditis elegans Hypothetical ... 87 1e-17
AC006762-2|AAF60558.2| 607|Caenorhabditis elegans Hypothetical ... 55 8e-08
Z81570-5|CAB04605.2| 321|Caenorhabditis elegans Hypothetical pr... 31 0.88
AL033514-14|CAA22101.2| 1420|Caenorhabditis elegans Hypothetical... 29 6.2
U55370-1|AAA97993.3| 313|Caenorhabditis elegans Serpentine rece... 28 8.2
AC006762-8|AAP31426.1| 295|Caenorhabditis elegans Hypothetical ... 28 8.2
AC006762-7|AAF60555.1| 375|Caenorhabditis elegans Hypothetical ... 28 8.2
>AC006762-4|AAU20835.1| 484|Caenorhabditis elegans Hypothetical
protein Y42G9A.4c protein.
Length = 484
Score = 87.4 bits (207), Expect = 1e-17
Identities = 63/230 (27%), Positives = 114/230 (49%)
Frame = +3
Query: 231 VSAPGKVILHGEHSVVYGKTAIAVSLGLRSSIVIKEVNTPHEPAVHIHLPCVDLQETIPL 410
VSAPGK+IL GEH+VVYG+TAIA S+ LR+ + + T + +++ LP + +++T L
Sbjct: 14 VSAPGKIILFGEHAVVYGRTAIAGSIDLRTYV---SLYTSADGRIYLSLPDLGVEKTWML 70
Query: 411 EPTVKSLFHPKLAPGITGKFSWRLPHKIDHDYHLRRVEEYLHLIKPNFDSLPNNQKNSLR 590
+ +K+ + + P + D L + + + + Q ++
Sbjct: 71 KDLLKA----------ADRLAAEYPIEEDQPPSLEILVPIARKLSGSCEDQCGVQHLAIL 120
Query: 591 SFLYVFSGIFGSTYLPVKSMDISMGSELTIGAGTGSSASFAVCLAGALIQLLKLKSSSGN 770
+F Y+ G+ + ++ ++ +L G GSS ++ VC+A +L+Q L
Sbjct: 121 AFWYLLLGV-AHRKRDLLAVKATVRFKLPSCVGLGSSGAYCVCIATSLLQTAGLIPPPSI 179
Query: 771 FDAYYDQSSQDFTDTEKEIISEWAXNXEKIMHGTPSGIDNATCTFGNLVS 920
+Q + + + +II +WA E ++HG SG+D A CTFG + S
Sbjct: 180 VAD--EQGNLTWEEDHLDIIRKWATAAESLIHGRASGLDAAVCTFGGVAS 227
>AC006762-3|AAU20834.1| 614|Caenorhabditis elegans Hypothetical
protein Y42G9A.4b protein.
Length = 614
Score = 87.4 bits (207), Expect = 1e-17
Identities = 63/230 (27%), Positives = 114/230 (49%)
Frame = +3
Query: 231 VSAPGKVILHGEHSVVYGKTAIAVSLGLRSSIVIKEVNTPHEPAVHIHLPCVDLQETIPL 410
VSAPGK+IL GEH+VVYG+TAIA S+ LR+ + + T + +++ LP + +++T L
Sbjct: 144 VSAPGKIILFGEHAVVYGRTAIAGSIDLRTYV---SLYTSADGRIYLSLPDLGVEKTWML 200
Query: 411 EPTVKSLFHPKLAPGITGKFSWRLPHKIDHDYHLRRVEEYLHLIKPNFDSLPNNQKNSLR 590
+ +K+ + + P + D L + + + + Q ++
Sbjct: 201 KDLLKA----------ADRLAAEYPIEEDQPPSLEILVPIARKLSGSCEDQCGVQHLAIL 250
Query: 591 SFLYVFSGIFGSTYLPVKSMDISMGSELTIGAGTGSSASFAVCLAGALIQLLKLKSSSGN 770
+F Y+ G+ + ++ ++ +L G GSS ++ VC+A +L+Q L
Sbjct: 251 AFWYLLLGV-AHRKRDLLAVKATVRFKLPSCVGLGSSGAYCVCIATSLLQTAGLIPPPSI 309
Query: 771 FDAYYDQSSQDFTDTEKEIISEWAXNXEKIMHGTPSGIDNATCTFGNLVS 920
+Q + + + +II +WA E ++HG SG+D A CTFG + S
Sbjct: 310 VAD--EQGNLTWEEDHLDIIRKWATAAESLIHGRASGLDAAVCTFGGVAS 357
>AC006762-1|AAU87813.1| 514|Caenorhabditis elegans Hypothetical
protein Y42G9A.4d protein.
Length = 514
Score = 87.4 bits (207), Expect = 1e-17
Identities = 63/230 (27%), Positives = 114/230 (49%)
Frame = +3
Query: 231 VSAPGKVILHGEHSVVYGKTAIAVSLGLRSSIVIKEVNTPHEPAVHIHLPCVDLQETIPL 410
VSAPGK+IL GEH+VVYG+TAIA S+ LR+ + + T + +++ LP + +++T L
Sbjct: 44 VSAPGKIILFGEHAVVYGRTAIAGSIDLRTYV---SLYTSADGRIYLSLPDLGVEKTWML 100
Query: 411 EPTVKSLFHPKLAPGITGKFSWRLPHKIDHDYHLRRVEEYLHLIKPNFDSLPNNQKNSLR 590
+ +K+ + + P + D L + + + + Q ++
Sbjct: 101 KDLLKA----------ADRLAAEYPIEEDQPPSLEILVPIARKLSGSCEDQCGVQHLAIL 150
Query: 591 SFLYVFSGIFGSTYLPVKSMDISMGSELTIGAGTGSSASFAVCLAGALIQLLKLKSSSGN 770
+F Y+ G+ + ++ ++ +L G GSS ++ VC+A +L+Q L
Sbjct: 151 AFWYLLLGV-AHRKRDLLAVKATVRFKLPSCVGLGSSGAYCVCIATSLLQTAGLIPPPSI 209
Query: 771 FDAYYDQSSQDFTDTEKEIISEWAXNXEKIMHGTPSGIDNATCTFGNLVS 920
+Q + + + +II +WA E ++HG SG+D A CTFG + S
Sbjct: 210 VAD--EQGNLTWEEDHLDIIRKWATAAESLIHGRASGLDAAVCTFGGVAS 257
>AC006762-2|AAF60558.2| 607|Caenorhabditis elegans Hypothetical
protein Y42G9A.4a protein.
Length = 607
Score = 54.8 bits (126), Expect = 8e-08
Identities = 28/66 (42%), Positives = 46/66 (69%)
Frame = +3
Query: 231 VSAPGKVILHGEHSVVYGKTAIAVSLGLRSSIVIKEVNTPHEPAVHIHLPCVDLQETIPL 410
VSAPGK+IL GEH+VVYG+TAIA S+ LR+ + + T + +++ LP + +++T L
Sbjct: 44 VSAPGKIILFGEHAVVYGRTAIAGSIDLRTYV---SLYTSADGRIYLSLPDLGVEKTWML 100
Query: 411 EPTVKS 428
+ +K+
Sbjct: 101 KDLLKA 106
Score = 52.8 bits (121), Expect = 3e-07
Identities = 27/78 (34%), Positives = 42/78 (53%)
Frame = +3
Query: 687 GTGSSASFAVCLAGALIQLLKLKSSSGNFDAYYDQSSQDFTDTEKEIISEWAXNXEKIMH 866
G GSS ++ VC+A +L+Q L +Q + + + +II +WA E ++H
Sbjct: 275 GLGSSGAYCVCIATSLLQTAGLIPPPSIVAD--EQGNLTWEEDHLDIIRKWATAAESLIH 332
Query: 867 GTPSGIDNATCTFGNLVS 920
G SG+D A CTFG + S
Sbjct: 333 GRASGLDAAVCTFGGVAS 350
>Z81570-5|CAB04605.2| 321|Caenorhabditis elegans Hypothetical
protein K12G11.5 protein.
Length = 321
Score = 31.5 bits (68), Expect = 0.88
Identities = 20/49 (40%), Positives = 25/49 (51%)
Frame = +3
Query: 615 IFGSTYLPVKSMDISMGSELTIGAGTGSSASFAVCLAGALIQLLKLKSS 761
I+ S YL SMD+S G + +GA A FA + I L LKSS
Sbjct: 163 IYSSQYLMFSSMDVSGGGIVIMGALMFGIALFANLMTFIRISLFYLKSS 211
>AL033514-14|CAA22101.2| 1420|Caenorhabditis elegans Hypothetical
protein Y75B8A.13 protein.
Length = 1420
Score = 28.7 bits (61), Expect = 6.2
Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 4/45 (8%)
Frame = -1
Query: 766 PEELFNFNSCINAPARQTAKDAE-LPVPAPMVSSD---PIEISID 644
PE + +FN AP Q ++D E +P P D P+EI+ D
Sbjct: 1179 PESMESFNEASEAPPDQRSEDQEAIPAEEPEEEQDPEEPVEINYD 1223
>U55370-1|AAA97993.3| 313|Caenorhabditis elegans Serpentine
receptor, class x protein77 protein.
Length = 313
Score = 28.3 bits (60), Expect = 8.2
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = -3
Query: 869 SVHYLLTIXGPFRYNLLFGIRKILA 795
S++ L+ I P +YN LFGI+ LA
Sbjct: 111 SINRLVAIYFPLKYNFLFGIKLTLA 135
>AC006762-8|AAP31426.1| 295|Caenorhabditis elegans Hypothetical
protein Y42G9A.3b protein.
Length = 295
Score = 28.3 bits (60), Expect = 8.2
Identities = 19/78 (24%), Positives = 34/78 (43%), Gaps = 2/78 (2%)
Frame = +3
Query: 498 HDYHLRRVEEYLHLIKPNFDSLPNNQK--NSLRSFLYVFSGIFGSTYLPVKSMDISMGSE 671
HDY L + H+ +P D P N K + + + G+ +T+ V +D+S S
Sbjct: 38 HDYGLEEIPMRYHIEQPEEDYDPQNVKKLDLTHNSFVILRGL--TTFNNVSVLDVSFNSL 95
Query: 672 LTIGAGTGSSASFAVCLA 725
+ G+ +S +A
Sbjct: 96 SALPEDIGTLSSLTTLIA 113
>AC006762-7|AAF60555.1| 375|Caenorhabditis elegans Hypothetical
protein Y42G9A.3a protein.
Length = 375
Score = 28.3 bits (60), Expect = 8.2
Identities = 19/78 (24%), Positives = 34/78 (43%), Gaps = 2/78 (2%)
Frame = +3
Query: 498 HDYHLRRVEEYLHLIKPNFDSLPNNQK--NSLRSFLYVFSGIFGSTYLPVKSMDISMGSE 671
HDY L + H+ +P D P N K + + + G+ +T+ V +D+S S
Sbjct: 38 HDYGLEEIPMRYHIEQPEEDYDPQNVKKLDLTHNSFVILRGL--TTFNNVSVLDVSFNSL 95
Query: 672 LTIGAGTGSSASFAVCLA 725
+ G+ +S +A
Sbjct: 96 SALPEDIGTLSSLTTLIA 113
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,138,319
Number of Sequences: 27780
Number of extensions: 542476
Number of successful extensions: 1656
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1527
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1652
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2370744068
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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