Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_F_P09
         (929 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578795-1|AAT07300.1|  441|Anopheles gambiae Gbb-60A2 protein.        27   0.81 
AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase ...    24   7.5  
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    23   10.0 

>AY578795-1|AAT07300.1|  441|Anopheles gambiae Gbb-60A2 protein.
          Length = 441

 Score = 27.1 bits (57), Expect = 0.81
 Identities = 15/45 (33%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
 Frame = -2

Query: 808 TLTHYFFEA*KPRP*CA-AKLSKLCILFYIYHN*HYNIKKIKGIL 677
           TL H       P+P CA  KL+ + +L++I  + + N+KK K ++
Sbjct: 391 TLVHLMHPTRVPKPCCAPTKLNPISVLYHI-DDANINLKKYKNMV 434


>AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase
           protein.
          Length = 808

 Score = 23.8 bits (49), Expect = 7.5
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +3

Query: 849 LVKFAVTLWMLIWXYTFD 902
           L+ F + +WM++W  T D
Sbjct: 409 LILFLLGMWMVLWEKTLD 426


>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
            channel alpha1 subunit protein.
          Length = 1893

 Score = 23.4 bits (48), Expect = 10.0
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +1

Query: 37   YVYSLVVYQFKNYF 78
            +V+ L  ++FKNYF
Sbjct: 1222 FVFKLAAFRFKNYF 1235


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 789,857
Number of Sequences: 2352
Number of extensions: 13345
Number of successful extensions: 22
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 101295495
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)