Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_F_P07
         (857 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    25   0.58 
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    25   0.58 
AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    25   1.0  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    23   2.3  
AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine 3-mon...    23   3.1  
AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine 3-mon...    23   3.1  
AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine 3-mon...    23   3.1  
AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    22   7.1  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          21   9.4  
AF263515-1|AAF74207.1|  126|Tribolium castaneum cytochrome P450 ...    21   9.4  

>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 25.4 bits (53), Expect = 0.58
 Identities = 18/45 (40%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
 Frame = +3

Query: 264 ISSKVLNELSTQDTLTRSGNKSDGNIKINIS-KNYEYISLSNLSL 395
           ISSK     +T  T T S   S   I+ NIS  NY Y   S + L
Sbjct: 2   ISSKFSPSTTTTTTTTSSALNSTPLIEFNISTSNYLYTPSSTIDL 46


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 25.4 bits (53), Expect = 0.58
 Identities = 18/45 (40%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
 Frame = +3

Query: 264 ISSKVLNELSTQDTLTRSGNKSDGNIKINIS-KNYEYISLSNLSL 395
           ISSK     +T  T T S   S   I+ NIS  NY Y   S + L
Sbjct: 2   ISSKFSPSTTTTTTTTSSALNSTPLIEFNISTSNYLYTPSSTIDL 46


>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 24.6 bits (51), Expect = 1.0
 Identities = 11/30 (36%), Positives = 20/30 (66%)
 Frame = -2

Query: 556 VLLSQTRSLSASHEDTVKEFSASATDKIAL 467
           V++S TR L+    D  K+F+ ++T K+A+
Sbjct: 239 VIMSPTRELAIQIADQGKKFAYNSTVKVAV 268


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 12/34 (35%), Positives = 15/34 (44%)
 Frame = +1

Query: 139 IESIINFNSIKILLCLYLMRSPSSPSKVIGTLFF 240
           I  +I FN+I    C     S  +   V  TLFF
Sbjct: 259 IGCLIQFNTIVFSFCYCYYNSKMTKDGVYNTLFF 292


>AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 290

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 9/30 (30%), Positives = 14/30 (46%)
 Frame = -3

Query: 609 CICRLGHHVLLNLITDRLSCYPRQEVYLLH 520
           CI  +    L N++   L  YP  ++Y  H
Sbjct: 104 CIYSISRDYLNNVLLTELEKYPNVKIYFNH 133


>AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 9/30 (30%), Positives = 14/30 (46%)
 Frame = -3

Query: 609 CICRLGHHVLLNLITDRLSCYPRQEVYLLH 520
           CI  +    L N++   L  YP  ++Y  H
Sbjct: 104 CIYSISRDYLNNVLLTELEKYPNVKIYFNH 133


>AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 9/30 (30%), Positives = 14/30 (46%)
 Frame = -3

Query: 609 CICRLGHHVLLNLITDRLSCYPRQEVYLLH 520
           CI  +    L N++   L  YP  ++Y  H
Sbjct: 104 CIYSISRDYLNNVLLTELEKYPNVKIYFNH 133


>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -2

Query: 595 GPPCPFKSNN*SPV 554
           GPP P +SN  +PV
Sbjct: 8   GPPTPHESNTSTPV 21


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -3

Query: 852 LFVHDPXQYYPSNWIYR 802
           LFV  P +YY +  +YR
Sbjct: 770 LFVPIPNKYYEAKQVYR 786


>AF263515-1|AAF74207.1|  126|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 126

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -3

Query: 840 DPXQYYPSNWIYRHPKA 790
           DP ++ P N   RHP A
Sbjct: 108 DPDRFLPENCDKRHPYA 124


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 212,292
Number of Sequences: 336
Number of extensions: 4803
Number of successful extensions: 21
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23763101
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)