Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P28_F_P04
(826 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY818713-1|AAX35669.1| 691|Caenorhabditis elegans LIN-65S protein. 36 0.027
AY818712-1|AAX35668.1| 728|Caenorhabditis elegans LIN-65L protein. 36 0.027
AC025726-22|AAN73851.2| 512|Caenorhabditis elegans Abnormal cel... 36 0.027
AC025726-21|AAK73935.3| 728|Caenorhabditis elegans Abnormal cel... 36 0.027
U23181-6|AAC48204.1| 801|Caenorhabditis elegans Hypothetical pr... 36 0.035
AF026215-8|AAB71317.1| 415|Caenorhabditis elegans Hypothetical ... 36 0.047
Z66512-5|CAA91327.2| 1245|Caenorhabditis elegans Hypothetical pr... 35 0.081
U80442-4|AAB37667.1| 226|Caenorhabditis elegans Hypothetical pr... 33 0.19
U41992-7|AAA83358.1| 374|Caenorhabditis elegans Hypothetical pr... 33 0.33
U46675-7|AAB52641.1| 1274|Caenorhabditis elegans Hypothetical pr... 31 0.76
AC024136-3|AAF35959.2| 470|Caenorhabditis elegans Hypothetical ... 30 1.7
U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein. 30 2.3
AF047661-4|AAC04435.2| 931|Caenorhabditis elegans Hypothetical ... 30 2.3
AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated... 30 2.3
AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated... 30 2.3
AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated... 30 2.3
U80032-5|AAB53878.1| 552|Caenorhabditis elegans Hypothetical pr... 29 3.1
U23523-10|AAP68941.1| 428|Caenorhabditis elegans Troponin t pro... 29 3.1
AF045643-3|AAC02591.1| 272|Caenorhabditis elegans Hypothetical ... 29 3.1
Z73102-6|CAA97412.1| 522|Caenorhabditis elegans Hypothetical pr... 29 4.0
Z83239-9|CAB05811.1| 517|Caenorhabditis elegans Hypothetical pr... 29 5.3
Z81099-4|CAB03189.1| 517|Caenorhabditis elegans Hypothetical pr... 29 5.3
Z73899-13|CAM35841.1| 6629|Caenorhabditis elegans Hypothetical p... 29 5.3
Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical p... 29 5.3
Z73897-6|CAM35838.1| 6629|Caenorhabditis elegans Hypothetical pr... 29 5.3
Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical pr... 29 5.3
U97196-1|AAK68667.2| 3279|Caenorhabditis elegans Hypothetical pr... 28 7.1
U00025-4|AAN65312.1| 606|Caenorhabditis elegans Hypothetical pr... 28 7.1
U00025-3|AAA50619.1| 804|Caenorhabditis elegans Hypothetical pr... 28 7.1
AF067211-1|AAC16986.1| 455|Caenorhabditis elegans Hypothetical ... 28 7.1
AB110824-1|BAD80739.1| 606|Caenorhabditis elegans chondroitin p... 28 7.1
AB110823-1|BAD80738.1| 804|Caenorhabditis elegans chondroitin p... 28 7.1
Z81546-7|CAB04452.1| 320|Caenorhabditis elegans Hypothetical pr... 28 9.3
Z46829-1|CAA86862.1| 375|Caenorhabditis elegans Hypothetical pr... 28 9.3
U28734-1|AAB52603.2| 397|Caenorhabditis elegans Hypothetical pr... 28 9.3
U21310-2|AAA62521.1| 322|Caenorhabditis elegans T box family pr... 28 9.3
AF164431-1|AAF82633.1| 320|Caenorhabditis elegans NUD-1 protein. 28 9.3
AC006607-9|AAF60368.2| 995|Caenorhabditis elegans Hypothetical ... 28 9.3
>AY818713-1|AAX35669.1| 691|Caenorhabditis elegans LIN-65S protein.
Length = 691
Score = 36.3 bits (80), Expect = 0.027
Identities = 33/106 (31%), Positives = 49/106 (46%), Gaps = 4/106 (3%)
Frame = +1
Query: 418 AKSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAII 597
A + P A SA + A+ P+ EVQ V + S SA +E S SA +
Sbjct: 50 AADAPAPGAPEASAPAQEASEASAPDQEAPEVQ-DVPDSSGAPDASAQASEASDASAPEV 108
Query: 598 PNMVKKIDL--APNV--ESDAAAVPEIKTPEAADAPKLADNPVDED 723
P + D P+ SDA+A + PEA +AP++A +DE+
Sbjct: 109 PGSTEAQDAQDVPDSLGASDASAQEIPEAPEAPEAPEIAAE-IDEE 153
Score = 29.9 bits (64), Expect = 2.3
Identities = 18/73 (24%), Positives = 30/73 (41%)
Frame = +1
Query: 493 EDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLAPNVESDAAAVPEIKT 672
+D T V ++ ++E + E + AA P AP E+ A+ P+ +
Sbjct: 19 DDDDTPEPILVIDMDEDEDVTTDGPESQEELAADAPAPGAPEASAPAQEASEASAPDQEA 78
Query: 673 PEAADAPKLADNP 711
PE D P + P
Sbjct: 79 PEVQDVPDSSGAP 91
>AY818712-1|AAX35668.1| 728|Caenorhabditis elegans LIN-65L protein.
Length = 728
Score = 36.3 bits (80), Expect = 0.027
Identities = 33/106 (31%), Positives = 49/106 (46%), Gaps = 4/106 (3%)
Frame = +1
Query: 418 AKSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAII 597
A + P A SA + A+ P+ EVQ V + S SA +E S SA +
Sbjct: 87 AADAPAPGAPEASAPAQEASEASAPDQEAPEVQ-DVPDSSGAPDASAQASEASDASAPEV 145
Query: 598 PNMVKKIDL--APNV--ESDAAAVPEIKTPEAADAPKLADNPVDED 723
P + D P+ SDA+A + PEA +AP++A +DE+
Sbjct: 146 PGSTEAQDAQDVPDSLGASDASAQEIPEAPEAPEAPEIAAE-IDEE 190
Score = 29.9 bits (64), Expect = 2.3
Identities = 18/73 (24%), Positives = 30/73 (41%)
Frame = +1
Query: 493 EDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLAPNVESDAAAVPEIKT 672
+D T V ++ ++E + E + AA P AP E+ A+ P+ +
Sbjct: 56 DDDDTPEPILVIDMDEDEDVTTDGPESQEELAADAPAPGAPEASAPAQEASEASAPDQEA 115
Query: 673 PEAADAPKLADNP 711
PE D P + P
Sbjct: 116 PEVQDVPDSSGAP 128
>AC025726-22|AAN73851.2| 512|Caenorhabditis elegans Abnormal cell
lineage protein 65,isoform b protein.
Length = 512
Score = 36.3 bits (80), Expect = 0.027
Identities = 33/106 (31%), Positives = 49/106 (46%), Gaps = 4/106 (3%)
Frame = +1
Query: 418 AKSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAII 597
A + P A SA + A+ P+ EVQ V + S SA +E S SA +
Sbjct: 87 AADAPAPGAPEASAPAQEASEASAPDQEAPEVQ-DVPDSSGAPDASAQASEASDASAPEV 145
Query: 598 PNMVKKIDL--APNV--ESDAAAVPEIKTPEAADAPKLADNPVDED 723
P + D P+ SDA+A + PEA +AP++A +DE+
Sbjct: 146 PGSTEAQDAQDVPDSLGASDASAQEIPEAPEAPEAPEIAAE-IDEE 190
Score = 29.9 bits (64), Expect = 2.3
Identities = 18/73 (24%), Positives = 30/73 (41%)
Frame = +1
Query: 493 EDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLAPNVESDAAAVPEIKT 672
+D T V ++ ++E + E + AA P AP E+ A+ P+ +
Sbjct: 56 DDDDTPEPILVIDMDEDEDVTTDGPESQEELAADAPAPGAPEASAPAQEASEASAPDQEA 115
Query: 673 PEAADAPKLADNP 711
PE D P + P
Sbjct: 116 PEVQDVPDSSGAP 128
>AC025726-21|AAK73935.3| 728|Caenorhabditis elegans Abnormal cell
lineage protein 65,isoform a protein.
Length = 728
Score = 36.3 bits (80), Expect = 0.027
Identities = 33/106 (31%), Positives = 49/106 (46%), Gaps = 4/106 (3%)
Frame = +1
Query: 418 AKSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAII 597
A + P A SA + A+ P+ EVQ V + S SA +E S SA +
Sbjct: 87 AADAPAPGAPEASAPAQEASEASAPDQEAPEVQ-DVPDSSGAPDASAQASEASDASAPEV 145
Query: 598 PNMVKKIDL--APNV--ESDAAAVPEIKTPEAADAPKLADNPVDED 723
P + D P+ SDA+A + PEA +AP++A +DE+
Sbjct: 146 PGSTEAQDAQDVPDSLGASDASAQEIPEAPEAPEAPEIAAE-IDEE 190
Score = 29.9 bits (64), Expect = 2.3
Identities = 18/73 (24%), Positives = 30/73 (41%)
Frame = +1
Query: 493 EDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLAPNVESDAAAVPEIKT 672
+D T V ++ ++E + E + AA P AP E+ A+ P+ +
Sbjct: 56 DDDDTPEPILVIDMDEDEDVTTDGPESQEELAADAPAPGAPEASAPAQEASEASAPDQEA 115
Query: 673 PEAADAPKLADNP 711
PE D P + P
Sbjct: 116 PEVQDVPDSSGAP 128
>U23181-6|AAC48204.1| 801|Caenorhabditis elegans Hypothetical
protein ZK84.1 protein.
Length = 801
Score = 35.9 bits (79), Expect = 0.035
Identities = 37/145 (25%), Positives = 52/145 (35%)
Frame = +1
Query: 298 SNDEVPAIPEAKKDDIAPEDSDIAXXXXXXXXXXXXXXXXAKSSEIPDAEAKSADIKVEE 477
+++ PA EA D A ++ A A SS +P+ A E
Sbjct: 504 ASEPAPAPIEAPATDAATLETAPAPAAEPAPAAEAAAGYDAPSS-VPEETPAPAPAADET 562
Query: 478 PAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLAPNVESDAAAV 657
PA P +T A AE + P+A + +A +A P D P + A A
Sbjct: 563 PAPAPAAEETPAPAPAAEETPAPAPAAEETPATAPAAEETPAPAPAADETP---APAPAA 619
Query: 658 PEIKTPEAADAPKLADNPVDEDKPA 732
E P A A P E+ PA
Sbjct: 620 EETPAPAPAVEETPAPAPAVEETPA 644
Score = 31.5 bits (68), Expect = 0.76
Identities = 30/106 (28%), Positives = 42/106 (39%), Gaps = 5/106 (4%)
Frame = +1
Query: 436 PDAEAKSAD--IKVEEPAAQPEDSKTEVQATVAEISKEEKPSA--TDAEGSADSAAIIPN 603
P AE A + AA DS AT S E +A TD+ SAD+ A + +
Sbjct: 289 PTAEETPAPETVSAAPEAANSYDSAGGDAATAPAPSSEAADAAAPTDSAASADTTAALVD 348
Query: 604 MVKKIDLAPNVESDAAAVPEIKTPEAADAP-KLADNPVDEDKPADI 738
A + E+ A + +T A P +AD D P+ I
Sbjct: 349 TSSSEHAAESTEAPATDIAATETTPAPSVPAPVADAAAGYDSPSSI 394
Score = 29.9 bits (64), Expect = 2.3
Identities = 26/99 (26%), Positives = 35/99 (35%)
Frame = +1
Query: 436 PDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKK 615
P E A E P + E A VAE + P+A + A +A P
Sbjct: 637 PAVEETPAPAPAAEETPAPAPAAAEYAAPVAEETPAPAPAAEETPAPAQAAEETPAPAPA 696
Query: 616 IDLAPNVESDAAAVPEIKTPEAADAPKLADNPVDEDKPA 732
+ P + AA P A +AP A P + PA
Sbjct: 697 AEETP-ASAPAAEETPAPAPAAEEAP--APAPAAPETPA 732
Score = 29.1 bits (62), Expect = 4.0
Identities = 25/93 (26%), Positives = 44/93 (47%), Gaps = 2/93 (2%)
Frame = +1
Query: 418 AKSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSA--TDAEGSADSAA 591
A+++E A A +A+ E PA+ P +T A AE + P+A T A + +AA
Sbjct: 684 AQAAEETPAPAPAAE---ETPASAPAAEETPAPAPAAEEAPAPAPAAPETPAPAAEGAAA 740
Query: 592 IIPNMVKKIDLAPNVESDAAAVPEIKTPEAADA 690
P + D A + ++ A+ + +A+ A
Sbjct: 741 PAPIVSSGYDAAQSTDTVVASSAPATSSDASGA 773
>AF026215-8|AAB71317.1| 415|Caenorhabditis elegans Hypothetical
protein F09G2.9 protein.
Length = 415
Score = 35.5 bits (78), Expect = 0.047
Identities = 30/96 (31%), Positives = 42/96 (43%), Gaps = 5/96 (5%)
Frame = +1
Query: 421 KSSEIPDAEAKSADIKV-----EEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADS 585
KS E P E K ++ V +EPAA E+ K + V E KEE P++ +E D
Sbjct: 126 KSEEAPAPEEKKSEEVVAAEEKKEPAAVVEEKKEVPETPVVEDKKEEAPAS--SEEKKDE 183
Query: 586 AAIIPNMVKKIDLAPNVESDAAAVPEIKTPEAADAP 693
+ K AP + ++ A E K E AP
Sbjct: 184 PVVNTEEKKDAAEAPAADEESEAAEE-KVAETTVAP 218
>Z66512-5|CAA91327.2| 1245|Caenorhabditis elegans Hypothetical
protein F52H3.7a protein.
Length = 1245
Score = 34.7 bits (76), Expect = 0.081
Identities = 26/100 (26%), Positives = 41/100 (41%), Gaps = 3/100 (3%)
Frame = +1
Query: 445 EAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEK---PSATDAEGSADSAAIIPNMVKK 615
EA ++ VEEP TE A ++ +E K + T A+ A+ + +
Sbjct: 440 EAAASSESVEEPITAVHVEATESAAPADKVHEETKIDSAAETHADAPVVDASPAEDQASE 499
Query: 616 IDLAPNVESDAAAVPEIKTPEAADAPKLADNPVDEDKPAD 735
+ AP+VES A + P D + V+ PAD
Sbjct: 500 VTEAPHVES-AKSAPATSEDHKEDVAQATSEQVETQAPAD 538
Score = 29.5 bits (63), Expect = 3.1
Identities = 37/137 (27%), Positives = 55/137 (40%), Gaps = 7/137 (5%)
Frame = +1
Query: 304 DEVPAIPEAKKDDIAPEDSDIAXXXXXXXXXXXXXXXXAKSSEIPDAEAKSADIKVEEPA 483
+ PA+ E KD+ AP + + A A+SA VEE A
Sbjct: 576 ESAPALAEEHKDEAAPSE------------PVQDVPVEEVIEAVHIAPAESAPASVEE-A 622
Query: 484 AQPEDSKTEVQ----ATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLAPN-VES-- 642
A E ++ V+ AT A S E+P A +A+S P K + +P +ES
Sbjct: 623 APSESTQAPVEEHKDATTAADSSHEEPKAESDAPAAESVETAPVEEHKDEASPTALESVE 682
Query: 643 DAAAVPEIKTPEAADAP 693
D + + E+A AP
Sbjct: 683 DVIEAVHVASTESAPAP 699
>U80442-4|AAB37667.1| 226|Caenorhabditis elegans Hypothetical
protein T20F5.5 protein.
Length = 226
Score = 33.5 bits (73), Expect = 0.19
Identities = 32/97 (32%), Positives = 48/97 (49%), Gaps = 2/97 (2%)
Frame = +1
Query: 451 KSADIKVEEPAAQPEDSK-TEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLA 627
KSA K+ P+ + ED++ T+ A+ E S + KP T E SAD + ++ + LA
Sbjct: 66 KSASKKLRVPSKESEDTQPTKSDASQTEKSTK-KPPVTLVESSADVTTAVESISSQQQLA 124
Query: 628 PNVESDAAAVPEIKTPEAADAPKLADNPVDE-DKPAD 735
P AA V + +A+ AP V E +K AD
Sbjct: 125 P-----AAPVAPPQLTQASPAPVAPAVLVPEKEKTAD 156
>U41992-7|AAA83358.1| 374|Caenorhabditis elegans Hypothetical
protein F32E10.6 protein.
Length = 374
Score = 32.7 bits (71), Expect = 0.33
Identities = 25/101 (24%), Positives = 44/101 (43%)
Frame = +1
Query: 424 SSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPN 603
S + P AKS D + ++ E+ + + + + SK K +A+D + + A +
Sbjct: 185 SKKSPKKSAKSKD----DDSSDEEEEEEVKEKSPKKSSKSTKRAASDDDEEEEPVATKKS 240
Query: 604 MVKKIDLAPNVESDAAAVPEIKTPEAADAPKLADNPVDEDK 726
K P E D +KTP+ K A+ P +ED+
Sbjct: 241 KKSKRAETPEEEDDEEE-EVVKTPKKTKKSKRAETPEEEDE 280
>U46675-7|AAB52641.1| 1274|Caenorhabditis elegans Hypothetical
protein F35A5.1 protein.
Length = 1274
Score = 31.5 bits (68), Expect = 0.76
Identities = 27/101 (26%), Positives = 37/101 (36%), Gaps = 1/101 (0%)
Frame = +1
Query: 418 AKSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAII 597
AK P E+ + PA +P D + A A K + + G ADS
Sbjct: 549 AKKDPAPAKESLKPKADTKAPA-KPRDPSPKKVAPTAPEKKTPVLAKKEPAGPADSKTKE 607
Query: 598 PNMVKKIDLAPNVESDAAAVPEIK-TPEAADAPKLADNPVD 717
P K D +P A VP+ + P A P+ P D
Sbjct: 608 PEKSKPRDPSPKKAVPAKPVPKTEVAPAAVKKPEPISKPKD 648
>AC024136-3|AAF35959.2| 470|Caenorhabditis elegans Hypothetical
protein F54A3.6 protein.
Length = 470
Score = 30.3 bits (65), Expect = 1.7
Identities = 16/49 (32%), Positives = 22/49 (44%)
Frame = +1
Query: 469 VEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKK 615
VEEP P KT + A + PSA + GS+ + N +KK
Sbjct: 235 VEEPIPPPNTRKTLLGEPPAGAASSSSPSAQSSTGSSTGTSSYQNNIKK 283
>U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein.
Length = 6632
Score = 29.9 bits (64), Expect = 2.3
Identities = 24/102 (23%), Positives = 45/102 (44%)
Frame = +1
Query: 421 KSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIP 600
K S PD + KS + E+PA+ + + EV++ KE+ P++ + + +A +
Sbjct: 1374 KKSPSPDKKEKSPEKTEEKPASPTKKTGEEVKS-----PKEKSPASPTKKEKSPAAEEVK 1428
Query: 601 NMVKKIDLAPNVESDAAAVPEIKTPEAADAPKLADNPVDEDK 726
+ KK + +P+ + P T + D K P K
Sbjct: 1429 SPTKK-EKSPSSPTKKEKSPSSPTKKTGDEVKEKSPPKSPTK 1469
>AF047661-4|AAC04435.2| 931|Caenorhabditis elegans Hypothetical
protein M70.1 protein.
Length = 931
Score = 29.9 bits (64), Expect = 2.3
Identities = 14/43 (32%), Positives = 19/43 (44%)
Frame = +1
Query: 610 KKIDLAPNVESDAAAVPEIKTPEAADAPKLADNPVDEDKPADI 738
KK D P+ VP TP+ A P P ++KP D+
Sbjct: 812 KKKDTKPSAPKPKPDVPVNPTPQTAKVPVAPAPPAKDEKPKDV 854
>AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated
protein 89, isoform a protein.
Length = 6632
Score = 29.9 bits (64), Expect = 2.3
Identities = 24/102 (23%), Positives = 45/102 (44%)
Frame = +1
Query: 421 KSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIP 600
K S PD + KS + E+PA+ + + EV++ KE+ P++ + + +A +
Sbjct: 1374 KKSPSPDKKEKSPEKTEEKPASPTKKTGEEVKS-----PKEKSPASPTKKEKSPAAEEVK 1428
Query: 601 NMVKKIDLAPNVESDAAAVPEIKTPEAADAPKLADNPVDEDK 726
+ KK + +P+ + P T + D K P K
Sbjct: 1429 SPTKK-EKSPSSPTKKEKSPSSPTKKTGDEVKEKSPPKSPTK 1469
>AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated
protein 89, isoform g protein.
Length = 7122
Score = 29.9 bits (64), Expect = 2.3
Identities = 24/102 (23%), Positives = 45/102 (44%)
Frame = +1
Query: 421 KSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIP 600
K S PD + KS + E+PA+ + + EV++ KE+ P++ + + +A +
Sbjct: 1374 KKSPSPDKKEKSPEKTEEKPASPTKKTGEEVKS-----PKEKSPASPTKKEKSPAAEEVK 1428
Query: 601 NMVKKIDLAPNVESDAAAVPEIKTPEAADAPKLADNPVDEDK 726
+ KK + +P+ + P T + D K P K
Sbjct: 1429 SPTKK-EKSPSSPTKKEKSPSSPTKKTGDEVKEKSPPKSPTK 1469
>AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated
protein 89, isoform b protein.
Length = 8081
Score = 29.9 bits (64), Expect = 2.3
Identities = 24/102 (23%), Positives = 45/102 (44%)
Frame = +1
Query: 421 KSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIP 600
K S PD + KS + E+PA+ + + EV++ KE+ P++ + + +A +
Sbjct: 1374 KKSPSPDKKEKSPEKTEEKPASPTKKTGEEVKS-----PKEKSPASPTKKEKSPAAEEVK 1428
Query: 601 NMVKKIDLAPNVESDAAAVPEIKTPEAADAPKLADNPVDEDK 726
+ KK + +P+ + P T + D K P K
Sbjct: 1429 SPTKK-EKSPSSPTKKEKSPSSPTKKTGDEVKEKSPPKSPTK 1469
>U80032-5|AAB53878.1| 552|Caenorhabditis elegans Hypothetical
protein C32E12.1 protein.
Length = 552
Score = 29.5 bits (63), Expect = 3.1
Identities = 18/80 (22%), Positives = 35/80 (43%)
Frame = +1
Query: 460 DIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLAPNVE 639
DIK + A + ++ +T+ + + +E K + D+ P K N++
Sbjct: 235 DIKAFQ-AEKSKEIETKKNEEMEKKQEEPKVKPVPPGTTPDTTTTTPEKKSKSITDSNIK 293
Query: 640 SDAAAVPEIKTPEAADAPKL 699
+ +PE +TPEA P +
Sbjct: 294 PELDEIPEARTPEAEGPPMM 313
>U23523-10|AAP68941.1| 428|Caenorhabditis elegans Troponin t
protein 2, isoform a protein.
Length = 428
Score = 29.5 bits (63), Expect = 3.1
Identities = 18/54 (33%), Positives = 26/54 (48%)
Frame = +1
Query: 418 AKSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSA 579
A+ E +A A+ A + EEP A E++ E + +EEKP A E A
Sbjct: 21 AEEVEEEEAAAEDAAAEEEEPEAAEEEAPVEEKPKPRPPVQEEKPPAEMTEAEA 74
>AF045643-3|AAC02591.1| 272|Caenorhabditis elegans Hypothetical
protein F58H7.5 protein.
Length = 272
Score = 29.5 bits (63), Expect = 3.1
Identities = 26/95 (27%), Positives = 42/95 (44%), Gaps = 1/95 (1%)
Frame = +1
Query: 457 ADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLAPNV 636
A+++VEE P+DS E + +AE K++ S + E + L V
Sbjct: 93 AEMEVEE-VDSPQDSPDEFEEDIAEEVKDKSASEEEEEDEHQVFQFENPRDLEDPLRRRV 151
Query: 637 ESDAAAVPEIKTPEAADAP-KLADNPVDEDKPADI 738
+ + P DAP ++A NPVD++ DI
Sbjct: 152 PYEIHF--PFREPPQEDAPMRMAQNPVDQEAIDDI 184
>Z73102-6|CAA97412.1| 522|Caenorhabditis elegans Hypothetical
protein B0035.5 protein.
Length = 522
Score = 29.1 bits (62), Expect = 4.0
Identities = 19/63 (30%), Positives = 27/63 (42%), Gaps = 1/63 (1%)
Frame = +1
Query: 544 EKPSATDAEGSADSAAIIPNMVKKIDLAPNVESDAAAVPEIKTPEAADAPKLADN-PVDE 720
EKP++ +AE D + K ++L V A PE PEA+ K + P D
Sbjct: 280 EKPASLNAEDIRDEKVKVLKAAKVVELKDVVVGQYIASPEFDHPEASQGYKDDKSVPADS 339
Query: 721 DKP 729
P
Sbjct: 340 TTP 342
>Z83239-9|CAB05811.1| 517|Caenorhabditis elegans Hypothetical
protein K08F9.4 protein.
Length = 517
Score = 28.7 bits (61), Expect = 5.3
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = +1
Query: 487 QPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLAP 630
+ E+ + E+Q A+ S+ E PS++ S+DS + KK +AP
Sbjct: 24 EEEEEEEEIQPGPADSSESENPSSSSDSSSSDSDSDSDAAPKKNIIAP 71
>Z81099-4|CAB03189.1| 517|Caenorhabditis elegans Hypothetical
protein K08F9.4 protein.
Length = 517
Score = 28.7 bits (61), Expect = 5.3
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = +1
Query: 487 QPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLAP 630
+ E+ + E+Q A+ S+ E PS++ S+DS + KK +AP
Sbjct: 24 EEEEEEEEIQPGPADSSESENPSSSSDSSSSDSDSDSDAAPKKNIIAP 71
>Z73899-13|CAM35841.1| 6629|Caenorhabditis elegans Hypothetical
protein ZK617.1c protein.
Length = 6629
Score = 28.7 bits (61), Expect = 5.3
Identities = 22/77 (28%), Positives = 36/77 (46%)
Frame = +1
Query: 445 EAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDL 624
E K + I V+E KTE + E + +K TD++GS + KK+ +
Sbjct: 224 EVKESTISVKEKNGTESGIKTEFKMEKRERTTLQKYEKTDSDGSKKE-----DKPKKVSI 278
Query: 625 APNVESDAAAVPEIKTP 675
AP V ++ ++ E TP
Sbjct: 279 AP-VSTNKSSDDEPSTP 294
>Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical
protein ZK617.1b protein.
Length = 7158
Score = 28.7 bits (61), Expect = 5.3
Identities = 22/77 (28%), Positives = 36/77 (46%)
Frame = +1
Query: 445 EAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDL 624
E K + I V+E KTE + E + +K TD++GS + KK+ +
Sbjct: 763 EVKESTISVKEKNGTESGIKTEFKMEKRERTTLQKYEKTDSDGSKKE-----DKPKKVSI 817
Query: 625 APNVESDAAAVPEIKTP 675
AP V ++ ++ E TP
Sbjct: 818 AP-VSTNKSSDDEPSTP 833
>Z73897-6|CAM35838.1| 6629|Caenorhabditis elegans Hypothetical
protein ZK617.1c protein.
Length = 6629
Score = 28.7 bits (61), Expect = 5.3
Identities = 22/77 (28%), Positives = 36/77 (46%)
Frame = +1
Query: 445 EAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDL 624
E K + I V+E KTE + E + +K TD++GS + KK+ +
Sbjct: 224 EVKESTISVKEKNGTESGIKTEFKMEKRERTTLQKYEKTDSDGSKKE-----DKPKKVSI 278
Query: 625 APNVESDAAAVPEIKTP 675
AP V ++ ++ E TP
Sbjct: 279 AP-VSTNKSSDDEPSTP 294
>Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical
protein ZK617.1b protein.
Length = 7158
Score = 28.7 bits (61), Expect = 5.3
Identities = 22/77 (28%), Positives = 36/77 (46%)
Frame = +1
Query: 445 EAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDL 624
E K + I V+E KTE + E + +K TD++GS + KK+ +
Sbjct: 763 EVKESTISVKEKNGTESGIKTEFKMEKRERTTLQKYEKTDSDGSKKE-----DKPKKVSI 817
Query: 625 APNVESDAAAVPEIKTP 675
AP V ++ ++ E TP
Sbjct: 818 AP-VSTNKSSDDEPSTP 833
>U97196-1|AAK68667.2| 3279|Caenorhabditis elegans Hypothetical protein
B0207.5 protein.
Length = 3279
Score = 28.3 bits (60), Expect = 7.1
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 8/73 (10%)
Frame = +1
Query: 421 KSSEIPDAEAKSADIKV--------EEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGS 576
K SEIPD + +KV E+P + PE+S+ E ++K++K + S
Sbjct: 2869 KGSEIPDEDENGESVKVMKRKEYQIEKPQSMPEESEDE---EFKLLTKKKKMGVIANDPS 2925
Query: 577 ADSAAIIPNMVKK 615
D + II KK
Sbjct: 2926 NDGSEIIKMSKKK 2938
>U00025-4|AAN65312.1| 606|Caenorhabditis elegans Hypothetical
protein PAR2.4b protein.
Length = 606
Score = 28.3 bits (60), Expect = 7.1
Identities = 11/20 (55%), Positives = 17/20 (85%)
Frame = +1
Query: 151 VSLAMPVAEEKDVVPAQPIL 210
V++ +PVA EKDV+PA+ +L
Sbjct: 317 VTVVIPVASEKDVLPARKLL 336
>U00025-3|AAA50619.1| 804|Caenorhabditis elegans Hypothetical
protein PAR2.4a protein.
Length = 804
Score = 28.3 bits (60), Expect = 7.1
Identities = 11/20 (55%), Positives = 17/20 (85%)
Frame = +1
Query: 151 VSLAMPVAEEKDVVPAQPIL 210
V++ +PVA EKDV+PA+ +L
Sbjct: 515 VTVVIPVASEKDVLPARKLL 534
>AF067211-1|AAC16986.1| 455|Caenorhabditis elegans Hypothetical
protein B0205.10 protein.
Length = 455
Score = 28.3 bits (60), Expect = 7.1
Identities = 25/101 (24%), Positives = 41/101 (40%), Gaps = 2/101 (1%)
Frame = +1
Query: 442 AEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKI- 618
+ K+AD + PA P + + +A P+A D + + +P +
Sbjct: 46 SSTKAADQQPAAPAPAPASVQQQPEAPAPA------PTAPDVQQPGPAPVPVPEPAQLAP 99
Query: 619 DLAPNVESDA-AAVPEIKTPEAADAPKLADNPVDEDKPADI 738
AP DA AA P +TP+ A AP+ + PA +
Sbjct: 100 QSAPEPTPDAPAAAPVQETPQVAPAPETPAPAPETPAPAPV 140
>AB110824-1|BAD80739.1| 606|Caenorhabditis elegans chondroitin
polymerizing factor-S protein.
Length = 606
Score = 28.3 bits (60), Expect = 7.1
Identities = 11/20 (55%), Positives = 17/20 (85%)
Frame = +1
Query: 151 VSLAMPVAEEKDVVPAQPIL 210
V++ +PVA EKDV+PA+ +L
Sbjct: 317 VTVVIPVASEKDVLPARKLL 336
>AB110823-1|BAD80738.1| 804|Caenorhabditis elegans chondroitin
polymerizing factor protein.
Length = 804
Score = 28.3 bits (60), Expect = 7.1
Identities = 11/20 (55%), Positives = 17/20 (85%)
Frame = +1
Query: 151 VSLAMPVAEEKDVVPAQPIL 210
V++ +PVA EKDV+PA+ +L
Sbjct: 515 VTVVIPVASEKDVLPARKLL 534
>Z81546-7|CAB04452.1| 320|Caenorhabditis elegans Hypothetical
protein F53A2.4 protein.
Length = 320
Score = 27.9 bits (59), Expect = 9.3
Identities = 23/80 (28%), Positives = 33/80 (41%), Gaps = 1/80 (1%)
Frame = +1
Query: 448 AKSADIKVEEPAA-QPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDL 624
AK ++ EE AA + E +K V+ + E + S DS + PN DL
Sbjct: 99 AKVVEVTDEEAAAFEKEQAKNSVENLEKFVDNEGETSKDAEVEDEDSKLMKPNSGNGADL 158
Query: 625 APNVESDAAAVPEIKTPEAA 684
A + E+K P AA
Sbjct: 159 AKYQWTQTLQELEVKIPIAA 178
>Z46829-1|CAA86862.1| 375|Caenorhabditis elegans Hypothetical
protein T14B1.1 protein.
Length = 375
Score = 27.9 bits (59), Expect = 9.3
Identities = 22/75 (29%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Frame = +1
Query: 433 IPDAEAKSADIKVEEPAAQPEDSKTEVQATVA-EISKEEKPSATDAEGSADSAAIIPNMV 609
+PD E D +VEEP A+ K V A A E + E +A+ S++ + P+
Sbjct: 1 MPDPEDPGRDEEVEEPLAK----KIRVVAQEAGEDEESEMEKEPNADLSSEEELVAPDAE 56
Query: 610 KKIDLAPNVESDAAA 654
D P ++++A A
Sbjct: 57 ---DFVPEIDNEATA 68
>U28734-1|AAB52603.2| 397|Caenorhabditis elegans Hypothetical
protein C53C9.2 protein.
Length = 397
Score = 27.9 bits (59), Expect = 9.3
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = +1
Query: 430 EIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAE 570
E + E + + K+EEPAA+ E+ + E + E EE+ + E
Sbjct: 347 EPEEEEEEEEEEKIEEPAAKEEEEEEEEEEEEEEEELEEEEEEEEEE 393
>U21310-2|AAA62521.1| 322|Caenorhabditis elegans T box family
protein 11 protein.
Length = 322
Score = 27.9 bits (59), Expect = 9.3
Identities = 17/65 (26%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Frame = +1
Query: 538 KEEKPSATDAEGSADSAAIIPNMVKKI-DLAPNVESDAAAVPEIKTPEAADAPKLADNPV 714
+ E+ S +EG++ +I P KKI D+AP + D + + + ++ P +A+ P
Sbjct: 188 RRERQSPVYSEGTSSEKSISPPPAKKIKDMAPAL-PDYSVISKPNLLQSLIFPMIAEQPS 246
Query: 715 DEDKP 729
P
Sbjct: 247 TSQSP 251
>AF164431-1|AAF82633.1| 320|Caenorhabditis elegans NUD-1 protein.
Length = 320
Score = 27.9 bits (59), Expect = 9.3
Identities = 23/80 (28%), Positives = 33/80 (41%), Gaps = 1/80 (1%)
Frame = +1
Query: 448 AKSADIKVEEPAA-QPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDL 624
AK ++ EE AA + E +K V+ + E + S DS + PN DL
Sbjct: 99 AKVVEVTDEEAAAFEKEQAKNSVENLEKFVDNEGETSKDAEVEDEDSKLMKPNSGNGADL 158
Query: 625 APNVESDAAAVPEIKTPEAA 684
A + E+K P AA
Sbjct: 159 AKYQWTQTLQELEVKIPIAA 178
>AC006607-9|AAF60368.2| 995|Caenorhabditis elegans Hypothetical
protein C09E7.7 protein.
Length = 995
Score = 27.9 bits (59), Expect = 9.3
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +2
Query: 437 PMLKQNLLILKWKNQLLSLKIQKLKYKLPSLKFQ 538
P L N+LI WK + K ++ KY + LK Q
Sbjct: 199 PKLSLNVLISMWKKEFSDWKDEEFKYFIDFLKSQ 232
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.308 0.126 0.341
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,520,622
Number of Sequences: 27780
Number of extensions: 223663
Number of successful extensions: 721
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 649
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 719
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2040452812
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
- SilkBase 1999-2023 -