Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_F_P02
         (901 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A4PHN6 Cluster: Beta-N-acetylglucosaminidase 1; n=1; Bo...   293   4e-78
UniRef50_Q170Q1 Cluster: Beta-hexosaminidase; n=2; Culicidae|Rep...    61   3e-08
UniRef50_A5YVX4 Cluster: Beta-N-acetylglucosaminidase NAG2; n=1;...    54   4e-06
UniRef50_Q9W3C4 Cluster: CG1787-PA; n=2; Sophophora|Rep: CG1787-...    53   1e-05
UniRef50_UPI00015B54AC Cluster: PREDICTED: similar to beta-N-ace...    42   0.016
UniRef50_Q20997 Cluster: Putative uncharacterized protein; n=1; ...    35   2.5  
UniRef50_A4F660 Cluster: Protoporphyrinogen oxidase; n=1; Saccha...    33   7.5  

>UniRef50_A4PHN6 Cluster: Beta-N-acetylglucosaminidase 1; n=1;
           Bombyx mori|Rep: Beta-N-acetylglucosaminidase 1 - Bombyx
           mori (Silk moth)
          Length = 611

 Score =  293 bits (719), Expect = 4e-78
 Identities = 135/156 (86%), Positives = 135/156 (86%)
 Frame = +2

Query: 431 GVLCNVESTFDEITPQIYEPSWMYKCVPDEGCQRSEHPRPTLSDNSTSAFFDSLDVCRIV 610
           GVLCNVESTFDEITPQIYEPSWMYKCVPDEGCQRSEHPRPTLSDNSTSAFFDSLDVCRIV
Sbjct: 17  GVLCNVESTFDEITPQIYEPSWMYKCVPDEGCQRSEHPRPTLSDNSTSAFFDSLDVCRIV 76

Query: 611 CGRFGGIWPKPVTAALSSQTVKIHPNYLRYDLLNVPAETRELLVEMTQVISNNLLAECGG 790
           CGRFGGIWPKPVTAALSSQTVKIHPNYLRYDLLNVPAETRELLVEMTQVISNNLLAECGG
Sbjct: 77  CGRFGGIWPKPVTAALSSQTVKIHPNYLRYDLLNVPAETRELLVEMTQVISNNLLAECGG 136

Query: 791 HXXXXXXXXXXXXXXXXXXXXSLNWNTDXQYMLDVQ 898
           H                    SLNWNTD QYMLDVQ
Sbjct: 137 HVTEVVDTQVVVIIVVKTAITSLNWNTDEQYMLDVQ 172


>UniRef50_Q170Q1 Cluster: Beta-hexosaminidase; n=2; Culicidae|Rep:
           Beta-hexosaminidase - Aedes aegypti (Yellowfever
           mosquito)
          Length = 578

 Score = 61.3 bits (142), Expect = 3e-08
 Identities = 33/114 (28%), Positives = 52/114 (45%), Gaps = 3/114 (2%)
 Frame = +2

Query: 563 NSTSAFFDSLDVCRIVCGRFGGIWPKP-VTAALSSQTVKIHPNYLRYDLLNVP--AETRE 733
           N++ ++ DSL+ CR+VCG +  +WP P V   L   T +  P+ + +D    P     ++
Sbjct: 30  NASESYLDSLNECRLVCGEYRALWPIPAVVVNLGYDTREFVPSDIEFDFHASPDDVNVQD 89

Query: 734 LLVEMTQVISNNLLAECGGHXXXXXXXXXXXXXXXXXXXXSLNWNTDXQYMLDV 895
            L + T++   NL  ECG +                    SL W+TD  Y L V
Sbjct: 90  YLNQSTRLFLKNLYKECGRNCNLTTNTRIYFTIKVETTETSLTWSTDESYDLFV 143


>UniRef50_A5YVX4 Cluster: Beta-N-acetylglucosaminidase NAG2; n=1;
           Tribolium castaneum|Rep: Beta-N-acetylglucosaminidase
           NAG2 - Tribolium castaneum (Red flour beetle)
          Length = 593

 Score = 54.4 bits (125), Expect = 4e-06
 Identities = 33/136 (24%), Positives = 63/136 (46%), Gaps = 2/136 (1%)
 Frame = +2

Query: 494 WMYKCVPDEG-CQRSEHPRPTLSDNSTSAFFDSLDVCRIVCGRFGGIWPKPVTAA-LSSQ 667
           W ++C  DE  C R      T+S N+ +  + +L+ CR+VCG++G +WP+P +   +SS 
Sbjct: 30  WYWQCNTDEETCTRISS---TVSRNTDT--YPTLETCRLVCGKYGALWPQPTSVTKISST 84

Query: 668 TVKIHPNYLRYDLLNVPAETRELLVEMTQVISNNLLAECGGHXXXXXXXXXXXXXXXXXX 847
            +K     +++++ +   E  + L E++ +    +  E                      
Sbjct: 85  LLKFPYRSIKFNIPDEKNEVNDFLREISWIFLETVANE-NTTNCPEQKNTVTVTFTVQSD 143

Query: 848 XXSLNWNTDXQYMLDV 895
             +LNW T+  Y LD+
Sbjct: 144 DTTLNWGTNESYNLDL 159


>UniRef50_Q9W3C4 Cluster: CG1787-PA; n=2; Sophophora|Rep: CG1787-PA
           - Drosophila melanogaster (Fruit fly)
          Length = 622

 Score = 52.8 bits (121), Expect = 1e-05
 Identities = 29/108 (26%), Positives = 47/108 (43%), Gaps = 2/108 (1%)
 Frame = +2

Query: 581 FDSLDVCRIVCGRFGGIWPKPV--TAALSSQTVKIHPNYLRYDLLNVPAETRELLVEMTQ 754
           F+S   CR+ CG++G IWP P      +S + V+  P  +R+ ++       + L E  +
Sbjct: 77  FESQRDCRLSCGKYGAIWPMPTGKECTISHRRVRFDPWKVRFHVVAPGEAATQFLRETNR 136

Query: 755 VISNNLLAECGGHXXXXXXXXXXXXXXXXXXXXSLNWNTDXQYMLDVQ 898
           +  +NLL EC  +                     L+W TD  Y L V+
Sbjct: 137 LFVSNLLKECIRNCTLETSKQILVRSTVANESLVLDWPTDESYALVVR 184


>UniRef50_UPI00015B54AC Cluster: PREDICTED: similar to
           beta-N-acetylglucosaminidase NAG2; n=1; Nasonia
           vitripennis|Rep: PREDICTED: similar to
           beta-N-acetylglucosaminidase NAG2 - Nasonia vitripennis
          Length = 767

 Score = 42.3 bits (95), Expect = 0.016
 Identities = 32/144 (22%), Positives = 51/144 (35%), Gaps = 3/144 (2%)
 Frame = +2

Query: 473 PQIYEPSWMYKCVPDEGCQRSEHPRPTLSDNSTSAFFDSLDVCRIVCGRFGGIWPKPVTA 652
           P + +P       P  G     HP+   +         SL  CR+VC    G+WP P T 
Sbjct: 113 PGLQDPQQQRPDGPGSGSPPPPHPQAQPAQTPEPML--SLQACRLVCSNAAGLWPIP-TG 169

Query: 653 ALSSQTVKIHPNYLRYDLLNV---PAETRELLVEMTQVISNNLLAECGGHXXXXXXXXXX 823
            +++ T  +  +   +  LNV       R  + +   V   N+   C GH          
Sbjct: 170 PMTTGTNYLVVSPRSFQFLNVNDLSESARTFVSDAIDVFLRNIQTSC-GHDCKPAERKVV 228

Query: 824 XXXXXXXXXXSLNWNTDXQYMLDV 895
                      L+W T+  Y L++
Sbjct: 229 VHLKVESSSLQLDWETNEAYDLEI 252


>UniRef50_Q20997 Cluster: Putative uncharacterized protein; n=1;
           Caenorhabditis elegans|Rep: Putative uncharacterized
           protein - Caenorhabditis elegans
          Length = 267

 Score = 35.1 bits (77), Expect = 2.5
 Identities = 18/54 (33%), Positives = 20/54 (37%)
 Frame = +2

Query: 464 EITPQIYEPSWMYKCVPDEGCQRSEHPRPTLSDNSTSAFFDSLDVCRIVCGRFG 625
           E  P  Y P   Y C   E C R E P+    +NS   F  S   C    G  G
Sbjct: 130 ECLPSFYGPKCQYYCTSGEKCSRDECPKRKCQNNSQCQFDGSESKCVCQSGYIG 183


>UniRef50_A4F660 Cluster: Protoporphyrinogen oxidase; n=1;
           Saccharopolyspora erythraea NRRL 2338|Rep:
           Protoporphyrinogen oxidase - Saccharopolyspora erythraea
           (strain NRRL 23338)
          Length = 423

 Score = 33.5 bits (73), Expect = 7.5
 Identities = 23/61 (37%), Positives = 32/61 (52%), Gaps = 4/61 (6%)
 Frame = -2

Query: 672 TVCELSAAVTGLG---QIPPNLPQTIRHTSSESKKADVELSDNVGLGCSLR*H-PSSGTH 505
           TV E S  + GL    ++  N  +   H S ++ +A +EL   +GLG  LR H PS G H
Sbjct: 27  TVLEASDELGGLAASIEVGGNSLERFYHHSFKTDRAVIELVHELGLGSKLRFHKPSIGIH 86

Query: 504 L 502
           L
Sbjct: 87  L 87


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 789,861,041
Number of Sequences: 1657284
Number of extensions: 14513879
Number of successful extensions: 31706
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 30734
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31688
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 81571813589
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)