Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_F_P02
         (901 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    53   4e-09
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    35   0.001
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    26   0.35 
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    23   3.3  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    21   9.9  

>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 52.8 bits (121), Expect = 4e-09
 Identities = 33/136 (24%), Positives = 63/136 (46%), Gaps = 2/136 (1%)
 Frame = +2

Query: 494 WMYKCVPDEG-CQRSEHPRPTLSDNSTSAFFDSLDVCRIVCGRFGGIWPKPVTAA-LSSQ 667
           W ++C  DE  C R      T+S N+ +  + +L+ CR+VCG++G +WP+P +   +SS 
Sbjct: 30  WYWQCNTDEETCTRISS---TVSRNTDT--YPTLETCRLVCGKYGALWPQPTSVTKISST 84

Query: 668 TVKIHPNYLRYDLLNVPAETRELLVEMTQVISNNLLAECGGHXXXXXXXXXXXXXXXXXX 847
            +K     +++++ +   E  + L E++ +    +  E                      
Sbjct: 85  LLKFPYRSIKFNIPDEKNEVNDFLREISWIFLETVANE-NTTNCPEQKNTVTVTFTVQSD 143

Query: 848 XXSLNWNTDXQYMLDV 895
             +LNW T+  Y LD+
Sbjct: 144 DTTLNWGTNESYNLDL 159


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 34.7 bits (76), Expect = 0.001
 Identities = 22/97 (22%), Positives = 41/97 (42%), Gaps = 1/97 (1%)
 Frame = +2

Query: 491 SWMYKCVPDEGCQRSEHPRPTLSDNSTSAFFDSLDVCRIVCGRFGGIWPKPV-TAALSSQ 667
           +W ++C  +  CQ++    P   D   +    SL  CR+ C     +WPKP     + + 
Sbjct: 24  AWRWECKSNY-CQKA----PITPDTEATGL--SLPACRLFCSEAAALWPKPTGEVHVGTT 76

Query: 668 TVKIHPNYLRYDLLNVPAETRELLVEMTQVISNNLLA 778
            VK++ N +    L       +++   T+   N + A
Sbjct: 77  LVKVNINSINTGGLTFETAAHKIMAGATKRFRNQIEA 113


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 26.2 bits (55), Expect = 0.35
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = +2

Query: 587 SLDVCRIVCGRFGGIWPKPVTAALSSQTVKI 679
           SL  C ++C     IWPKPV   L+++   I
Sbjct: 64  SLATCNMLCSE-PAIWPKPVHIKLTNRESSI 93


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 23.0 bits (47), Expect = 3.3
 Identities = 11/51 (21%), Positives = 23/51 (45%)
 Frame = -1

Query: 262 SDTAGFCLFNLMFIYSLF*SARRMYSLCQVRQYFVTTVDY*TVLSNVVVIY 110
           S  AGF    +   Y       +    C++ +YF+  +   T+L++ V ++
Sbjct: 11  SAIAGFLFLLICDSYLKIYHKEKYRKFCRILKYFIIAIYVLTILTSSVTLH 61


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -3

Query: 278 NSSDFFRHSWFLS 240
           N +D  +H WFLS
Sbjct: 5   NITDVLKHVWFLS 17


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 190,165
Number of Sequences: 336
Number of extensions: 3993
Number of successful extensions: 14
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 25030786
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)