Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P28_F_P01
(800 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF039041-9|AAB94188.2| 194|Caenorhabditis elegans Troponin i pr... 101 5e-22
AB107583-1|BAD89381.1| 194|Caenorhabditis elegans troponin I 4 ... 101 5e-22
Z81593-2|CAB04737.1| 260|Caenorhabditis elegans Hypothetical pr... 97 1e-20
AB107359-1|BAD89380.1| 260|Caenorhabditis elegans troponin I 3 ... 97 1e-20
U40951-3|AAG01564.2| 242|Caenorhabditis elegans Uncoordinated p... 95 5e-20
AB107357-1|BAD89378.1| 242|Caenorhabditis elegans troponin I 2 ... 95 5e-20
Z66562-5|CAA91466.1| 250|Caenorhabditis elegans Hypothetical pr... 93 3e-19
AB107358-1|BAD89379.1| 250|Caenorhabditis elegans troponin I 1 ... 93 3e-19
U29082-3|AAT92083.1| 1178|Caenorhabditis elegans Troponin t prot... 33 0.24
Z81118-6|CAI46578.1| 1203|Caenorhabditis elegans Hypothetical pr... 32 0.55
Z81118-5|CAB03330.2| 1205|Caenorhabditis elegans Hypothetical pr... 32 0.55
U23523-11|AAP68942.2| 324|Caenorhabditis elegans Troponin t pro... 32 0.55
U23523-10|AAP68941.1| 428|Caenorhabditis elegans Troponin t pro... 32 0.55
AY032860-1|AAK52089.1| 1205|Caenorhabditis elegans EEA1 protein. 32 0.55
U46753-2|AAA85760.1| 894|Caenorhabditis elegans Hypothetical pr... 30 2.2
Z73973-5|CAA98267.2| 882|Caenorhabditis elegans Hypothetical pr... 29 5.1
U29381-14|ABI54346.1| 1840|Caenorhabditis elegans Hypothetical p... 29 5.1
U29381-13|ABI54348.1| 1898|Caenorhabditis elegans Hypothetical p... 29 5.1
U29381-12|AAM98022.3| 1671|Caenorhabditis elegans Hypothetical p... 29 5.1
U29381-11|ABI54347.1| 1911|Caenorhabditis elegans Hypothetical p... 29 5.1
AF016442-7|AAB65920.1| 481|Caenorhabditis elegans Hypothetical ... 28 8.9
>AF039041-9|AAB94188.2| 194|Caenorhabditis elegans Troponin i
protein 4 protein.
Length = 194
Score = 101 bits (243), Expect = 5e-22
Identities = 63/166 (37%), Positives = 84/166 (50%), Gaps = 1/166 (0%)
Frame = +3
Query: 147 DRKRAEVRKRMEEASXXXXXXXGFMTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 326
+RK+ EVRKR+EEAS GF+TP
Sbjct: 16 ERKKEEVRKRLEEASRMKKAKKGFLTPERKKKLRKLLMMKAAEDLKQQQMLKEQERQRIL 75
Query: 327 XXXCGKPKNIDDANEAELQTICQMYWHRIYNLEGDKYELERAIEIRKMEISDLNSQVNDL 506
++D NE +L+ + R+ +LE + Y++ + + EI++L VNDL
Sbjct: 76 QERIIPLPDLD--NEDDLEAVYDEIRERLIDLESENYDVSYIVRQKDFEINELTIAVNDL 133
Query: 507 RGKFVKPTLKKVSKYENKFAKLQKK-AAEFNFRNQLKVVKKKEFTL 641
RGKFVKPTLKKVSK E KF KL+KK A + +FR QLKVV K EF L
Sbjct: 134 RGKFVKPTLKKVSKTEGKFDKLKKKEATKVDFRAQLKVVDKNEFAL 179
>AB107583-1|BAD89381.1| 194|Caenorhabditis elegans troponin I 4
protein.
Length = 194
Score = 101 bits (243), Expect = 5e-22
Identities = 63/166 (37%), Positives = 84/166 (50%), Gaps = 1/166 (0%)
Frame = +3
Query: 147 DRKRAEVRKRMEEASXXXXXXXGFMTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 326
+RK+ EVRKR+EEAS GF+TP
Sbjct: 16 ERKKEEVRKRLEEASRMKKAKKGFLTPERKKKLRKLLMMKAAEDLKQQQMLKEQERQRIL 75
Query: 327 XXXCGKPKNIDDANEAELQTICQMYWHRIYNLEGDKYELERAIEIRKMEISDLNSQVNDL 506
++D NE +L+ + R+ +LE + Y++ + + EI++L VNDL
Sbjct: 76 QERIIPLPDLD--NEDDLEAVYDEIRERLIDLESENYDVSYIVRQKDFEINELTIAVNDL 133
Query: 507 RGKFVKPTLKKVSKYENKFAKLQKK-AAEFNFRNQLKVVKKKEFTL 641
RGKFVKPTLKKVSK E KF KL+KK A + +FR QLKVV K EF L
Sbjct: 134 RGKFVKPTLKKVSKTEGKFDKLKKKEATKVDFRAQLKVVDKNEFAL 179
>Z81593-2|CAB04737.1| 260|Caenorhabditis elegans Hypothetical
protein T20B3.2 protein.
Length = 260
Score = 97.5 bits (232), Expect = 1e-20
Identities = 59/160 (36%), Positives = 80/160 (50%), Gaps = 1/160 (0%)
Frame = +3
Query: 153 KRAEVRKRMEEASXXXXXXXGFMTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 332
K+AEVRKRMEEA+ GF+TP
Sbjct: 31 KKAEVRKRMEEAAKKGSKKKGFLTPERKKKLRKLLMMKAAEDLKQQQMLKEQERQKTLQQ 90
Query: 333 XCGKPKNIDDANE-AELQTICQMYWHRIYNLEGDKYELERAIEIRKMEISDLNSQVNDLR 509
++D N+ +L I + + R+ LE +K+++ + + EI+ L QVNDLR
Sbjct: 91 RTIPLPDVDSINDQGQLLKIYEDMFARVCALEEEKFDINFGVSQTEAEINQLTIQVNDLR 150
Query: 510 GKFVKPTLKKVSKYENKFAKLQKKAAEFNFRNQLKVVKKK 629
GKFVKPTLKKVSKY+NKF + + NFRN LKVVKK+
Sbjct: 151 GKFVKPTLKKVSKYDNKFKSSGEVKEKSNFRNNLKVVKKE 190
>AB107359-1|BAD89380.1| 260|Caenorhabditis elegans troponin I 3
protein.
Length = 260
Score = 97.5 bits (232), Expect = 1e-20
Identities = 59/160 (36%), Positives = 80/160 (50%), Gaps = 1/160 (0%)
Frame = +3
Query: 153 KRAEVRKRMEEASXXXXXXXGFMTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 332
K+AEVRKRMEEA+ GF+TP
Sbjct: 31 KKAEVRKRMEEAAKKGSKKKGFLTPERKKKLRKLLMMKAAEDLKQQQMLKEQERQKTLQQ 90
Query: 333 XCGKPKNIDDANE-AELQTICQMYWHRIYNLEGDKYELERAIEIRKMEISDLNSQVNDLR 509
++D N+ +L I + + R+ LE +K+++ + + EI+ L QVNDLR
Sbjct: 91 RTIPLPDVDSINDQGQLLKIYEDMFARVCALEEEKFDINFGVSQTEAEINQLTIQVNDLR 150
Query: 510 GKFVKPTLKKVSKYENKFAKLQKKAAEFNFRNQLKVVKKK 629
GKFVKPTLKKVSKY+NKF + + NFRN LKVVKK+
Sbjct: 151 GKFVKPTLKKVSKYDNKFKSSGEVKEKSNFRNNLKVVKKE 190
>U40951-3|AAG01564.2| 242|Caenorhabditis elegans Uncoordinated
protein 27 protein.
Length = 242
Score = 95.1 bits (226), Expect = 5e-20
Identities = 57/163 (34%), Positives = 79/163 (48%), Gaps = 3/163 (1%)
Frame = +3
Query: 147 DRKRAEVRKRMEEASXXXXXXXGFMTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 326
+ K+AEVRKR+EEA GF+TP
Sbjct: 17 EAKKAEVRKRLEEAGNKKKAKKGFLTPERKKKLRKLLMVKAAEDLKRQQLLKEQERQKAL 76
Query: 327 XXXCGKPKNIDDANE-AELQTICQMYWHRIYNLEGDKYELERAIEIRKMEISDLNSQVND 503
N+D ++ +L+ I W R+ LE +KY++ + + EI+ L +VND
Sbjct: 77 ADRTISLPNVDSIDDKGQLEKIYNDLWARLTQLEEEKYDINYVVSQTEAEINSLTIEVND 136
Query: 504 LRGKFVKPTLKKVSKYENKFAKL--QKKAAEFNFRNQLKVVKK 626
LRGKFVKP+LKKVSKY+NKF K K + +FR LK+VKK
Sbjct: 137 LRGKFVKPSLKKVSKYDNKFKKSGESKAGTKEDFRANLKIVKK 179
>AB107357-1|BAD89378.1| 242|Caenorhabditis elegans troponin I 2
protein.
Length = 242
Score = 95.1 bits (226), Expect = 5e-20
Identities = 57/163 (34%), Positives = 79/163 (48%), Gaps = 3/163 (1%)
Frame = +3
Query: 147 DRKRAEVRKRMEEASXXXXXXXGFMTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 326
+ K+AEVRKR+EEA GF+TP
Sbjct: 17 EAKKAEVRKRLEEAGNKKKAKKGFLTPERKKKLRKLLMVKAAEDLKRQQLLKEQERQKAL 76
Query: 327 XXXCGKPKNIDDANE-AELQTICQMYWHRIYNLEGDKYELERAIEIRKMEISDLNSQVND 503
N+D ++ +L+ I W R+ LE +KY++ + + EI+ L +VND
Sbjct: 77 ADRTISLPNVDSIDDKGQLEKIYNDLWARLTQLEEEKYDINYVVSQTEAEINSLTIEVND 136
Query: 504 LRGKFVKPTLKKVSKYENKFAKL--QKKAAEFNFRNQLKVVKK 626
LRGKFVKP+LKKVSKY+NKF K K + +FR LK+VKK
Sbjct: 137 LRGKFVKPSLKKVSKYDNKFKKSGESKAGTKEDFRANLKIVKK 179
>Z66562-5|CAA91466.1| 250|Caenorhabditis elegans Hypothetical
protein F42E11.4 protein.
Length = 250
Score = 92.7 bits (220), Expect = 3e-19
Identities = 59/165 (35%), Positives = 82/165 (49%), Gaps = 4/165 (2%)
Frame = +3
Query: 147 DRKRAEVRKRMEEASXXXXXXXGFMTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 326
+ K+AEVRKR+EEA GF+TP
Sbjct: 30 EAKKAEVRKRLEEAGQKKQKK-GFLTPERKKKLRKLLMNKAAEDLKTQQLRKEQERVKVL 88
Query: 327 XXXCGKPKNIDDANE-AELQTICQMYWHRIYNLEGDKYELERAIEIRKMEISDLNSQVND 503
N+D ++ A+L+ I + R+ NLE +KY++ + I+ LN +VND
Sbjct: 89 AERTVALPNVDSIDDHAKLEAIYNDLFSRLCNLEEEKYDINHITTETETTINQLNIEVND 148
Query: 504 LRGKFVKPTLKKVSKYENKFAKL---QKKAAEFNFRNQLKVVKKK 629
LRGKFVKP+LKKVSKY+NKF K+ +K+ N RN LK VKK+
Sbjct: 149 LRGKFVKPSLKKVSKYDNKFKKMAEAKKEDGSKNLRNNLKTVKKE 193
>AB107358-1|BAD89379.1| 250|Caenorhabditis elegans troponin I 1
protein.
Length = 250
Score = 92.7 bits (220), Expect = 3e-19
Identities = 59/165 (35%), Positives = 82/165 (49%), Gaps = 4/165 (2%)
Frame = +3
Query: 147 DRKRAEVRKRMEEASXXXXXXXGFMTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 326
+ K+AEVRKR+EEA GF+TP
Sbjct: 30 EAKKAEVRKRLEEAGQKKQKK-GFLTPERKKKLRKLLMNKAAEDLKTQQLRKEQERVKVL 88
Query: 327 XXXCGKPKNIDDANE-AELQTICQMYWHRIYNLEGDKYELERAIEIRKMEISDLNSQVND 503
N+D ++ A+L+ I + R+ NLE +KY++ + I+ LN +VND
Sbjct: 89 AERTVALPNVDSIDDHAKLEAIYNDLFSRLCNLEEEKYDINHITTETETTINQLNIEVND 148
Query: 504 LRGKFVKPTLKKVSKYENKFAKL---QKKAAEFNFRNQLKVVKKK 629
LRGKFVKP+LKKVSKY+NKF K+ +K+ N RN LK VKK+
Sbjct: 149 LRGKFVKPSLKKVSKYDNKFKKMAEAKKEDGSKNLRNNLKTVKKE 193
>U29082-3|AAT92083.1| 1178|Caenorhabditis elegans Troponin t protein
3, isoform b protein.
Length = 1178
Score = 33.1 bits (72), Expect = 0.24
Identities = 27/101 (26%), Positives = 48/101 (47%), Gaps = 8/101 (7%)
Frame = +3
Query: 351 NIDDANEAELQTICQMYWHRIYNLEGDKYELERAIEIRKMEISDLNS---QV--NDLRGK 515
N + ++EL+ + RI LE +KY+LE+ E ++ ++ +LN QV N K
Sbjct: 1043 NASEVPQSELKAKIKELHQRICKLETEKYDLEKRHERQEYDMKELNERQRQVTRNSALKK 1102
Query: 516 FVKPTLKKVSKYENK---FAKLQKKAAEFNFRNQLKVVKKK 629
+ P ++Y K +K ++ NFR + V K+
Sbjct: 1103 GIDPAEVGNTRYPAKVQIVSKYDRQVDRRNFRERRSVFDKR 1143
>Z81118-6|CAI46578.1| 1203|Caenorhabditis elegans Hypothetical
protein T10G3.5b protein.
Length = 1203
Score = 31.9 bits (69), Expect = 0.55
Identities = 17/46 (36%), Positives = 30/46 (65%), Gaps = 1/46 (2%)
Frame = +3
Query: 426 GDKYELERAI-EIRKMEISDLNSQVNDLRGKFVKPTLKKVSKYENK 560
G + ER++ E + EIS+ +S +NDL+ K + + KK +KY+N+
Sbjct: 426 GSLLDKERSLLEEKNKEISERDSSINDLKEKLAE-SEKKATKYKNE 470
>Z81118-5|CAB03330.2| 1205|Caenorhabditis elegans Hypothetical
protein T10G3.5a protein.
Length = 1205
Score = 31.9 bits (69), Expect = 0.55
Identities = 17/46 (36%), Positives = 30/46 (65%), Gaps = 1/46 (2%)
Frame = +3
Query: 426 GDKYELERAI-EIRKMEISDLNSQVNDLRGKFVKPTLKKVSKYENK 560
G + ER++ E + EIS+ +S +NDL+ K + + KK +KY+N+
Sbjct: 428 GSLLDKERSLLEEKNKEISERDSSINDLKEKLAE-SEKKATKYKNE 472
>U23523-11|AAP68942.2| 324|Caenorhabditis elegans Troponin t
protein 2, isoform b protein.
Length = 324
Score = 31.9 bits (69), Expect = 0.55
Identities = 16/43 (37%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Frame = +3
Query: 408 RIYNLEGDKYELERAIEIRKMEISDLNSQVNDL-RGKFVKPTL 533
RI LEG+KY+LE+ E ++ ++ +LN + + R K +K L
Sbjct: 147 RIVKLEGEKYDLEKRRERQEYDLKELNERQRQVARNKALKKGL 189
>U23523-10|AAP68941.1| 428|Caenorhabditis elegans Troponin t
protein 2, isoform a protein.
Length = 428
Score = 31.9 bits (69), Expect = 0.55
Identities = 16/43 (37%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Frame = +3
Query: 408 RIYNLEGDKYELERAIEIRKMEISDLNSQVNDL-RGKFVKPTL 533
RI LEG+KY+LE+ E ++ ++ +LN + + R K +K L
Sbjct: 251 RIVKLEGEKYDLEKRRERQEYDLKELNERQRQVARNKALKKGL 293
>AY032860-1|AAK52089.1| 1205|Caenorhabditis elegans EEA1 protein.
Length = 1205
Score = 31.9 bits (69), Expect = 0.55
Identities = 17/46 (36%), Positives = 30/46 (65%), Gaps = 1/46 (2%)
Frame = +3
Query: 426 GDKYELERAI-EIRKMEISDLNSQVNDLRGKFVKPTLKKVSKYENK 560
G + ER++ E + EIS+ +S +NDL+ K + + KK +KY+N+
Sbjct: 428 GSLLDKERSLLEEKNKEISERDSSINDLKEKLAE-SEKKATKYKNE 472
>U46753-2|AAA85760.1| 894|Caenorhabditis elegans Hypothetical
protein C34F11.5 protein.
Length = 894
Score = 29.9 bits (64), Expect = 2.2
Identities = 17/45 (37%), Positives = 26/45 (57%)
Frame = +3
Query: 507 RGKFVKPTLKKVSKYENKFAKLQKKAAEFNFRNQLKVVKKKEFTL 641
RGKFV+P + ++ K+ K KL+K + KV+K+KE L
Sbjct: 649 RGKFVRPLMPRIPKFVAKKKKLKKVDGK-------KVLKRKEIVL 686
>Z73973-5|CAA98267.2| 882|Caenorhabditis elegans Hypothetical
protein F25D1.4 protein.
Length = 882
Score = 28.7 bits (61), Expect = 5.1
Identities = 18/66 (27%), Positives = 33/66 (50%)
Frame = +3
Query: 429 DKYELERAIEIRKMEISDLNSQVNDLRGKFVKPTLKKVSKYENKFAKLQKKAAEFNFRNQ 608
D E+E +++RK ++D+ + N+L F+ T + KFA L AA+ +F ++
Sbjct: 708 DHVEIEEMLKLRKTMVTDIPALANELSETFLAAT-----ESRRKFAVLTGIAADESFSDK 762
Query: 609 LKVVKK 626
K
Sbjct: 763 FSNFSK 768
>U29381-14|ABI54346.1| 1840|Caenorhabditis elegans Hypothetical
protein F35D11.11a protein.
Length = 1840
Score = 28.7 bits (61), Expect = 5.1
Identities = 21/62 (33%), Positives = 34/62 (54%), Gaps = 4/62 (6%)
Frame = +3
Query: 357 DDA---NEAELQTICQMYWHRIYN-LEGDKYELERAIEIRKMEISDLNSQVNDLRGKFVK 524
DDA N+A L+ + W Y L+ + E+ R + ++ E +DL + ++DLRG F K
Sbjct: 686 DDAARKNDALLEDVAT--WQEKYEQLKMELEEMNRRGQEKEREEADLRALLDDLRGNFDK 743
Query: 525 PT 530
T
Sbjct: 744 LT 745
>U29381-13|ABI54348.1| 1898|Caenorhabditis elegans Hypothetical
protein F35D11.11c protein.
Length = 1898
Score = 28.7 bits (61), Expect = 5.1
Identities = 21/62 (33%), Positives = 34/62 (54%), Gaps = 4/62 (6%)
Frame = +3
Query: 357 DDA---NEAELQTICQMYWHRIYN-LEGDKYELERAIEIRKMEISDLNSQVNDLRGKFVK 524
DDA N+A L+ + W Y L+ + E+ R + ++ E +DL + ++DLRG F K
Sbjct: 686 DDAARKNDALLEDVAT--WQEKYEQLKMELEEMNRRGQEKEREEADLRALLDDLRGNFDK 743
Query: 525 PT 530
T
Sbjct: 744 LT 745
>U29381-12|AAM98022.3| 1671|Caenorhabditis elegans Hypothetical
protein F35D11.11d protein.
Length = 1671
Score = 28.7 bits (61), Expect = 5.1
Identities = 21/62 (33%), Positives = 34/62 (54%), Gaps = 4/62 (6%)
Frame = +3
Query: 357 DDA---NEAELQTICQMYWHRIYN-LEGDKYELERAIEIRKMEISDLNSQVNDLRGKFVK 524
DDA N+A L+ + W Y L+ + E+ R + ++ E +DL + ++DLRG F K
Sbjct: 446 DDAARKNDALLEDVAT--WQEKYEQLKMELEEMNRRGQEKEREEADLRALLDDLRGNFDK 503
Query: 525 PT 530
T
Sbjct: 504 LT 505
>U29381-11|ABI54347.1| 1911|Caenorhabditis elegans Hypothetical
protein F35D11.11b protein.
Length = 1911
Score = 28.7 bits (61), Expect = 5.1
Identities = 21/62 (33%), Positives = 34/62 (54%), Gaps = 4/62 (6%)
Frame = +3
Query: 357 DDA---NEAELQTICQMYWHRIYN-LEGDKYELERAIEIRKMEISDLNSQVNDLRGKFVK 524
DDA N+A L+ + W Y L+ + E+ R + ++ E +DL + ++DLRG F K
Sbjct: 686 DDAARKNDALLEDVAT--WQEKYEQLKMELEEMNRRGQEKEREEADLRALLDDLRGNFDK 743
Query: 525 PT 530
T
Sbjct: 744 LT 745
>AF016442-7|AAB65920.1| 481|Caenorhabditis elegans Hypothetical
protein K12B6.7 protein.
Length = 481
Score = 27.9 bits (59), Expect = 8.9
Identities = 22/64 (34%), Positives = 30/64 (46%)
Frame = +3
Query: 423 EGDKYELERAIEIRKMEISDLNSQVNDLRGKFVKPTLKKVSKYENKFAKLQKKAAEFNFR 602
E D +E+ I RK+EI N + GKF K ++KK+ + KF KK N
Sbjct: 248 ENDLKNIEKIIRSRKLEIVPGNLSEKNFGGKF-KFSVKKI--FGGKFKFSVKKILAGNSN 304
Query: 603 NQLK 614
Q K
Sbjct: 305 LQCK 308
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,977,510
Number of Sequences: 27780
Number of extensions: 199218
Number of successful extensions: 694
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 660
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 692
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1956310428
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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