Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_F_O24
         (897 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    24   1.9  
Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor ...    23   4.3  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    23   4.3  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    22   5.7  
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    22   5.7  
U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    22   7.5  
AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain tran...    22   7.5  
AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.           22   7.5  

>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 23.8 bits (49), Expect = 1.9
 Identities = 15/59 (25%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
 Frame = +2

Query: 65  VFLLIQNQIKLIHN-IEHVSVSKLFFEDFFQL*STIVFTLQAIT-FYTSEAAVCPCNNW 235
           +FLLIQ + ++I+N I    V+    +  F L   +V  ++ I   +  +  +C   N+
Sbjct: 108 IFLLIQTRFEMINNIITRGDVTSTTIKKLFNLHKILVKVVREINGIFAFQVLMCTSMNF 166


>Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor
           5-like protein protein.
          Length = 162

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = +3

Query: 294 EKFKTKMNDFVSDSKNMIFTEDLK 365
           E  + +M D    +KNM   +DL+
Sbjct: 127 EAVRARMQDLTEGAKNMTINDDLE 150


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = -1

Query: 612 FHDNTVNQVISGMTLVDQKNHHLLV 538
           F+ N + +VIS +  +D K  H+L+
Sbjct: 99  FYQNKLIEVISKLHKLDNKLKHMLI 123


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 9/37 (24%), Positives = 18/37 (48%)
 Frame = +3

Query: 729 PKSLEYATKLWSDMASTGTLPLRRAATSFAGLALKQG 839
           P+S  +A ++WSD ++     +     SF+     +G
Sbjct: 528 PRSAAFAERIWSDPSAGDDYDIYTRLVSFSDRLKSRG 564


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 7/21 (33%), Positives = 13/21 (61%)
 Frame = -2

Query: 659 LFLLYFLKDPVHLIKHFMTIQ 597
           +F+LYF+ D  H   + + +Q
Sbjct: 329 IFILYFICDEAHYASNCLRVQ 349


>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -2

Query: 245 PIYSNCCRGIQQPHL 201
           PIY +C   I QP+L
Sbjct: 53  PIYESCRFSINQPYL 67


>AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain
           transcription factor Fushitarazu protein.
          Length = 290

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -2

Query: 245 PIYSNCCRGIQQPHL 201
           PIY +C   I QP+L
Sbjct: 53  PIYESCRFSINQPYL 67


>AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.
          Length = 290

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -2

Query: 245 PIYSNCCRGIQQPHL 201
           PIY +C   I QP+L
Sbjct: 53  PIYESCRFSINQPYL 67


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 220,063
Number of Sequences: 336
Number of extensions: 5137
Number of successful extensions: 16
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24927353
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)