Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P28_F_O24
(897 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_01_0365 - 2859617-2859722,2860047-2860489,2862232-2862391,286... 36 0.044
07_03_0441 + 18256103-18258076 34 0.18
07_03_0573 + 19614899-19617155,19617384-19617476,19618103-19618125 33 0.31
08_01_0612 + 5378190-5378251,5378926-5379244,5379381-5379671,538... 33 0.41
06_01_0010 - 151694-151951,152433-152489,152683-152774,153432-15... 31 0.94
07_03_1106 + 24017601-24019955 30 2.2
06_03_1207 + 28418473-28421073 30 2.2
11_04_0004 + 12013207-12013280,12013311-12013756,12013865-12014715 30 2.9
08_02_0864 + 21994286-21994989,21996257-21996958,21997221-219973... 30 2.9
07_01_0986 - 8314733-8314783,8315895-8318381 30 2.9
03_03_0041 - 14007687-14009381 30 2.9
01_05_0048 - 17561963-17563585 30 2.9
07_03_1745 - 29176951-29178901,29178960-29179069,29179536-29179547 29 3.8
04_04_1658 - 35119623-35119754,35121033-35121121,35121205-351215... 29 3.8
01_01_1125 - 8920590-8924372 29 3.8
02_02_0587 + 11875678-11877234,11877606-11877608,11877755-118778... 29 5.0
10_08_0510 + 18430580-18431781,18433176-18433554 29 6.6
05_03_0460 - 14294931-14295110,14295200-14295234,14295358-142954... 29 6.6
04_01_0328 - 4330904-4333129 29 6.6
08_01_0074 + 530207-532603 28 8.8
08_01_0055 - 375343-375567,375672-377540 28 8.8
03_02_0102 + 5637469-5639064 28 8.8
>01_01_0365 -
2859617-2859722,2860047-2860489,2862232-2862391,
2863431-2863516,2863648-2866272
Length = 1139
Score = 35.9 bits (79), Expect = 0.044
Identities = 29/92 (31%), Positives = 45/92 (48%)
Frame = +3
Query: 516 EALQCFEEPANDGFFDQQVSYQILLDLLYCHEMFDEMYRVFEKVQKKQINMTKFPKYCVV 695
+A + F+E A G +V+Y IL+ L M ++ +F+K++ K I +T +P
Sbjct: 356 DADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNS-- 413
Query: 696 LIMAACYKENTPKSLEYATKLWSDMASTGTLP 791
LI C K+ SL+ A L S M G P
Sbjct: 414 LINGYC-KQG---SLDRARGLLSGMVKEGLTP 441
>07_03_0441 + 18256103-18258076
Length = 657
Score = 33.9 bits (74), Expect = 0.18
Identities = 26/106 (24%), Positives = 45/106 (42%), Gaps = 1/106 (0%)
Frame = +3
Query: 516 EALQCFEEPANDGFFDQQVSYQILLDLLYCHEMFDEMYRVFEKVQKKQINMTKFPKYCVV 695
++ + FEE GF Y +L+D L D+ ++++++ + T Y
Sbjct: 453 QSKELFEEMIAKGFVPDSYCYNVLIDGLAKSGRMDDACALYKRMEDDGCDQT---VYTYT 509
Query: 696 LIMAACYKENTPKSLEYATKLWSDMASTGTLPLRRAATSFA-GLAL 830
+++ +KE+ E A K W M G P A + A GL L
Sbjct: 510 ILIDGLFKEH---KNEEALKFWDAMIDKGITPTAAAFRTLASGLCL 552
>07_03_0573 + 19614899-19617155,19617384-19617476,19618103-19618125
Length = 790
Score = 33.1 bits (72), Expect = 0.31
Identities = 19/50 (38%), Positives = 27/50 (54%)
Frame = +3
Query: 513 KEALQCFEEPANDGFFDQQVSYQILLDLLYCHEMFDEMYRVFEKVQKKQI 662
KEAL E GF SY L+ LL + F E R+FEK++K+++
Sbjct: 652 KEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRKERL 701
>08_01_0612 +
5378190-5378251,5378926-5379244,5379381-5379671,
5380520-5380768,5380843-5380967,5381487-5381585,
5381668-5382352
Length = 609
Score = 32.7 bits (71), Expect = 0.41
Identities = 19/68 (27%), Positives = 32/68 (47%)
Frame = +3
Query: 513 KEALQCFEEPANDGFFDQQVSYQILLDLLYCHEMFDEMYRVFEKVQKKQINMTKFPKYCV 692
+EAL FEE + G + SY IL+D + +E + VF+ +++ ++ P C
Sbjct: 334 EEALAVFEEMLDAGVRPTRKSYNILIDAFAISGLVEEAHTVFKAMRRHRVE----PDLCS 389
Query: 693 VLIMAACY 716
M Y
Sbjct: 390 YTTMVLAY 397
>06_01_0010 -
151694-151951,152433-152489,152683-152774,153432-153531,
153585-154211,154300-154638,154740-154991,155083-155556
Length = 732
Score = 31.5 bits (68), Expect = 0.94
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +2
Query: 743 ICNKTMVRYGFNGNITTQKSGDFFCWTRIKTGSSSHRLGINIRP 874
+CN+ + FN ++ +QKSG FCW + T H + P
Sbjct: 401 LCNQDQLHSAFNPHMESQKSG-AFCWAGLWTPYPQHWFDTIVEP 443
>07_03_1106 + 24017601-24019955
Length = 784
Score = 30.3 bits (65), Expect = 2.2
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = +3
Query: 513 KEALQCFEEPANDGFFDQQVSYQILLDLLYCHEMFDEMYRVFEKVQK 653
KEA Q F+E GF +V++ LLD+ DE V +++++
Sbjct: 260 KEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEMER 306
>06_03_1207 + 28418473-28421073
Length = 866
Score = 30.3 bits (65), Expect = 2.2
Identities = 19/83 (22%), Positives = 37/83 (44%)
Frame = +3
Query: 405 VLNMIKKFNTQSTEFRFGSFVFGPVVMRMFHFLDAPKEALQCFEEPANDGFFDQQVSYQI 584
VL M+++ Q + + S ++G V + H +A+ + DG ++Y
Sbjct: 359 VLKMMERDGCQPNAWTYNSLMYGLVKDKKLH------KAMALLTKMQKDGIIPNVITYTT 412
Query: 585 LLDLLYCHEMFDEMYRVFEKVQK 653
LL FD +R+FE +++
Sbjct: 413 LLQGQCDEHDFDNAFRLFEMMEQ 435
>11_04_0004 + 12013207-12013280,12013311-12013756,12013865-12014715
Length = 456
Score = 29.9 bits (64), Expect = 2.9
Identities = 23/87 (26%), Positives = 38/87 (43%), Gaps = 7/87 (8%)
Frame = +3
Query: 165 RLFLPCRQLHSTQVRLLYAP-ATIGIDGY------LQARKNVKEQFVNFSEKFKTKMNDF 323
R F+P S RL + +D Y L +R V E +F +ND
Sbjct: 210 RRFVPEHYTRSLYTRLQQLKQGDLSVDAYYKEMELLMSRTGVTENDEATMARFLNGLNDD 269
Query: 324 VSDSKNMIFTEDLKNMVHLAEPSDLQL 404
V + + + D+++MVH+A+ + QL
Sbjct: 270 VKERVEISYYYDIQSMVHIAQRVEQQL 296
>08_02_0864 + 21994286-21994989,21996257-21996958,21997221-21997374,
21997494-21997838,21998323-21999240,21999312-21999640,
21999709-21999832,21999901-22000071,22000188-22001648,
22002647-22002910,22003866-22004189
Length = 1831
Score = 29.9 bits (64), Expect = 2.9
Identities = 26/74 (35%), Positives = 35/74 (47%), Gaps = 9/74 (12%)
Frame = +3
Query: 429 NTQS-TEFRFGSFV-FGPVVMRMFHFLDAPKEALQCFEEPAND---GFFDQQ----VSYQ 581
NT S T RFG+ + PV + +F L A AND FD + +SY
Sbjct: 1397 NTNSGTAPRFGALADYNPVYITLFRELSQQGGARLFLPTGANDVVIPVFDDEPTSIISYA 1456
Query: 582 ILLDLLYCHEMFDE 623
L+ +YCH+M DE
Sbjct: 1457 -LVSPMYCHQMLDE 1469
>07_01_0986 - 8314733-8314783,8315895-8318381
Length = 845
Score = 29.9 bits (64), Expect = 2.9
Identities = 17/45 (37%), Positives = 24/45 (53%)
Frame = +3
Query: 513 KEALQCFEEPANDGFFDQQVSYQILLDLLYCHEMFDEMYRVFEKV 647
+EA + FE + G V+Y L+D L DE YR+FEK+
Sbjct: 440 EEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKM 484
Score = 29.5 bits (63), Expect = 3.8
Identities = 24/92 (26%), Positives = 41/92 (44%)
Frame = +3
Query: 516 EALQCFEEPANDGFFDQQVSYQILLDLLYCHEMFDEMYRVFEKVQKKQINMTKFPKYCVV 695
EAL FE D + +Y I++D+L +E YR+ ++++ + FP V
Sbjct: 372 EALSLFEVMKKDAEPNSS-TYNIIIDMLCLGGRVEEAYRILDEMEHASL----FPNLLTV 426
Query: 696 LIMAACYKENTPKSLEYATKLWSDMASTGTLP 791
IM + + LE A K++ + G P
Sbjct: 427 NIMVD--RLCKARKLEEAYKIFESASQRGCNP 456
>03_03_0041 - 14007687-14009381
Length = 564
Score = 29.9 bits (64), Expect = 2.9
Identities = 24/98 (24%), Positives = 38/98 (38%), Gaps = 2/98 (2%)
Frame = +3
Query: 552 GFFDQQVSYQILLDLLYCHEMFDEMYRVFEKVQKKQINMTKFPKYCVV--LIMAACYKEN 725
G V YQ ++ L+ H+M E RVF +++ + N+ + L C E
Sbjct: 250 GSVPDTVIYQRIIHGLFAHKMGSEALRVFNEIKLRGYNVDAVTYTTAIDGLCKMGCIDE- 308
Query: 726 TPKSLEYATKLWSDMASTGTLPLRRAATSFAGLALKQG 839
A ++W++M G P A S K G
Sbjct: 309 -------ARQIWNEMVDKGMEPNEYAYCSLVAYYCKAG 339
>01_05_0048 - 17561963-17563585
Length = 540
Score = 29.9 bits (64), Expect = 2.9
Identities = 15/74 (20%), Positives = 38/74 (51%)
Frame = +3
Query: 477 VVMRMFHFLDAPKEALQCFEEPANDGFFDQQVSYQILLDLLYCHEMFDEMYRVFEKVQKK 656
+++R + KEA++ FE+ ++ G Y L+D+L + + + +F+++++K
Sbjct: 193 IIVRRYARARKVKEAVETFEKMSSFGLKTDLSDYNWLIDILSKSKQVKKAHAIFKEMKRK 252
Query: 657 QINMTKFPKYCVVL 698
+ Y V++
Sbjct: 253 GRFIPDLKTYTVLM 266
>07_03_1745 - 29176951-29178901,29178960-29179069,29179536-29179547
Length = 690
Score = 29.5 bits (63), Expect = 3.8
Identities = 18/81 (22%), Positives = 36/81 (44%)
Frame = +3
Query: 516 EALQCFEEPANDGFFDQQVSYQILLDLLYCHEMFDEMYRVFEKVQKKQINMTKFPKYCVV 695
+ALQ E+ G V+Y ++ L H F E ++E++ ++ + C
Sbjct: 308 DALQMVEKMTMKGTGPDVVTYTTVVSCLCDHRRFSEAVGLWEEMVRRGLKPDVVA--CGA 365
Query: 696 LIMAACYKENTPKSLEYATKL 758
LI C + ++ E A+++
Sbjct: 366 LIFGLCKNQKVDEAFELASRM 386
>04_04_1658 -
35119623-35119754,35121033-35121121,35121205-35121599,
35122009-35122091,35122163-35124184,35124859-35124927,
35125050-35125130,35125215-35125308,35125435-35125499,
35125961-35126038,35126115-35126360
Length = 1117
Score = 29.5 bits (63), Expect = 3.8
Identities = 20/77 (25%), Positives = 34/77 (44%), Gaps = 1/77 (1%)
Frame = +3
Query: 513 KEALQCFEEPANDGFFDQQVSYQILLDLLYCHEMFDEMYRVFEKVQKKQINMTKFPKY-C 689
+EA+ FEE +G +V+Y LL + DE R F ++ + + K Y C
Sbjct: 613 REAIDLFEEMQEEGVEADEVAYLALLSACSHSGLVDECRRYFSRICQDRRMRPKAEHYAC 672
Query: 690 VVLIMAACYKENTPKSL 740
+V ++ + K L
Sbjct: 673 MVDLLGRAGELREAKEL 689
>01_01_1125 - 8920590-8924372
Length = 1260
Score = 29.5 bits (63), Expect = 3.8
Identities = 24/77 (31%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
Frame = +3
Query: 516 EALQCFEEPANDGFFDQQVSYQILLDLLYCHEMF-DEMYRVFEKVQKKQINMTKFPKYCV 692
EA + F+ + V+Y IL+ L C E F D+ + +F+K+ K I T +
Sbjct: 944 EAFRLFDYLESSEVLPTLVTYSILIAAL-CREGFLDDAHELFQKMSTKGIKPT--TRVYN 1000
Query: 693 VLIMAACYKENTPKSLE 743
+LI C T K+LE
Sbjct: 1001 LLISGYCNYGLTEKALE 1017
>02_02_0587 +
11875678-11877234,11877606-11877608,11877755-11877823,
11878605-11878719,11879139-11879248
Length = 617
Score = 29.1 bits (62), Expect = 5.0
Identities = 27/116 (23%), Positives = 50/116 (43%), Gaps = 2/116 (1%)
Frame = +3
Query: 513 KEALQCFEEPANDGFFDQQVSYQILLDLLYCHEMFDEMYRVFEKVQKKQI--NMTKFPKY 686
+EALQ FE+ ++G+ ++Y L+ FD + ++ + N+ + K
Sbjct: 301 EEALQVFEKMVHEGYCPTTMAYNALIFNFISVGNFDRCIKYYKDMLDNNCPPNIDTYRK- 359
Query: 687 CVVLIMAACYKENTPKSLEYATKLWSDMASTGTLPLRRAATSFAGLALKQGAPHIA 854
++ A +E + + A +++ +M S G LP T F G PH A
Sbjct: 360 ----MIRAFLRE---RKVADALQMFDEMLSRGILPSTGMITLFIEPLCTFGPPHAA 408
>10_08_0510 + 18430580-18431781,18433176-18433554
Length = 526
Score = 28.7 bits (61), Expect = 6.6
Identities = 14/49 (28%), Positives = 26/49 (53%)
Frame = +3
Query: 510 PKEALQCFEEPANDGFFDQQVSYQILLDLLYCHEMFDEMYRVFEKVQKK 656
PKEA+ ++ +DG V+Y L+D L + E ++F+ + K+
Sbjct: 167 PKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKR 215
>05_03_0460 -
14294931-14295110,14295200-14295234,14295358-14295457,
14295548-14295669,14296272-14296367,14296489-14298949
Length = 997
Score = 28.7 bits (61), Expect = 6.6
Identities = 26/102 (25%), Positives = 43/102 (42%), Gaps = 2/102 (1%)
Frame = +3
Query: 516 EALQCFEEPANDGFFDQQVSYQILLDLLYCHEMFDEMYRVFEKV--QKKQINMTKFPKYC 689
EA + EE G F V+Y +++D+ ++ +K+ ++KQ + +
Sbjct: 633 EAQKIMEEMLEKGLFPSVVTYNLMIDVCCKTGRIEKAISYLDKMVYEEKQPTVITYTS-- 690
Query: 690 VVLIMAACYKENTPKSLEYATKLWSDMASTGTLPLRRAATSF 815
LI C P + A KLW +M G P A T+F
Sbjct: 691 --LIDGFC-SAGRP---DEAIKLWCEMREKGCAPNNIAYTAF 726
>04_01_0328 - 4330904-4333129
Length = 741
Score = 28.7 bits (61), Expect = 6.6
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = -1
Query: 261 SWPVNTHLFQLLQGHTAASLV*NVIACRVKTIVDY 157
+W V T ++ LL G TAA+ V ++ ++T+ DY
Sbjct: 510 TWHVATEIYLLLSGRTAAAAVARLVR-TIRTLSDY 543
>08_01_0074 + 530207-532603
Length = 798
Score = 28.3 bits (60), Expect = 8.8
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = +3
Query: 510 PKEALQCFEEPANDGFFDQQVSYQILLDLLYCHEMFDEMYRVFEKVQKK 656
PKEA+ F + DG V+Y L+ L + E +VF+ + KK
Sbjct: 257 PKEAIGIFRKMCRDGVEPDVVTYNTLMVYLCKNGRSMEARKVFDSMVKK 305
>08_01_0055 - 375343-375567,375672-377540
Length = 697
Score = 28.3 bits (60), Expect = 8.8
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = +3
Query: 510 PKEALQCFEEPANDGFFDQQVSYQILLDLLYCHEMFDEMYRVFEKVQKK 656
PKEA+ F++ G V+Y L+D L + E ++F+ + K+
Sbjct: 293 PKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKSTEARKIFDSLVKR 341
>03_02_0102 + 5637469-5639064
Length = 531
Score = 28.3 bits (60), Expect = 8.8
Identities = 15/56 (26%), Positives = 27/56 (48%)
Frame = +3
Query: 480 VMRMFHFLDAPKEALQCFEEPANDGFFDQQVSYQILLDLLYCHEMFDEMYRVFEKV 647
++R+ H +AL+ + + N+GF + +L DLL DE R F ++
Sbjct: 397 IVRLCHRHGRVAQALELWSDMVNNGFGSFTLVSDVLFDLLCDEGKLDEAERCFHQM 452
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,255,043
Number of Sequences: 37544
Number of extensions: 444213
Number of successful extensions: 1120
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1039
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1118
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2530383840
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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