Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P28_F_O24
(897 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY578801-1|AAT07306.1| 506|Anopheles gambiae dSmad2 protein. 27 1.0
DQ999006-1|ABJ99082.1| 282|Anopheles gambiae voltage-dependent ... 25 2.4
AY137768-1|AAN16031.1| 282|Anopheles gambiae porin protein. 25 2.4
AY082909-1|AAL89811.1| 282|Anopheles gambiae porin protein. 25 2.4
AY334004-1|AAR01129.1| 194|Anopheles gambiae integrin protein. 25 4.1
AY334003-1|AAR01128.1| 194|Anopheles gambiae integrin protein. 25 4.1
AY334002-1|AAR01127.1| 194|Anopheles gambiae integrin protein. 25 4.1
AY334001-1|AAR01126.1| 194|Anopheles gambiae integrin protein. 25 4.1
AF492464-1|AAM11657.1| 803|Anopheles gambiae beta nu integrin s... 25 4.1
AY578803-1|AAT07308.1| 474|Anopheles gambiae mothers against Dp... 24 5.5
AY146717-1|AAO12077.1| 188|Anopheles gambiae odorant-binding pr... 24 7.2
>AY578801-1|AAT07306.1| 506|Anopheles gambiae dSmad2 protein.
Length = 506
Score = 26.6 bits (56), Expect = 1.0
Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Frame = +3
Query: 717 KENTPKSLEYATKLWSDMASTGTLPLRRAATSFA--GLALKQGAPHI 851
K + + LE A L + + T +P+ R A++ G+ALK+G PH+
Sbjct: 42 KSSALEELERA--LTAQSSHTKCIPISRNASAIGENGVALKKGLPHV 86
>DQ999006-1|ABJ99082.1| 282|Anopheles gambiae voltage-dependent
anion channel protein.
Length = 282
Score = 25.4 bits (53), Expect = 2.4
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +3
Query: 243 GYLQARKNVKEQFVNFSEKFKT 308
G L+ + VKE +NFSEK+ T
Sbjct: 55 GSLETKYKVKEYGLNFSEKWNT 76
>AY137768-1|AAN16031.1| 282|Anopheles gambiae porin protein.
Length = 282
Score = 25.4 bits (53), Expect = 2.4
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +3
Query: 243 GYLQARKNVKEQFVNFSEKFKT 308
G L+ + VKE +NFSEK+ T
Sbjct: 55 GSLETKYKVKEYGLNFSEKWNT 76
>AY082909-1|AAL89811.1| 282|Anopheles gambiae porin protein.
Length = 282
Score = 25.4 bits (53), Expect = 2.4
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +3
Query: 243 GYLQARKNVKEQFVNFSEKFKT 308
G L+ + VKE +NFSEK+ T
Sbjct: 55 GSLETKYKVKEYGLNFSEKWNT 76
>AY334004-1|AAR01129.1| 194|Anopheles gambiae integrin protein.
Length = 194
Score = 24.6 bits (51), Expect = 4.1
Identities = 11/33 (33%), Positives = 13/33 (39%), Gaps = 1/33 (3%)
Frame = -3
Query: 280 NCSLTF-FLACKYPSIPIVAGAYSSLTCVECNC 185
NC T CK PS V + C C+C
Sbjct: 17 NCECTTDTTGCKAPSNDAVCSGHGQCNCGRCSC 49
>AY334003-1|AAR01128.1| 194|Anopheles gambiae integrin protein.
Length = 194
Score = 24.6 bits (51), Expect = 4.1
Identities = 11/33 (33%), Positives = 13/33 (39%), Gaps = 1/33 (3%)
Frame = -3
Query: 280 NCSLTF-FLACKYPSIPIVAGAYSSLTCVECNC 185
NC T CK PS V + C C+C
Sbjct: 17 NCECTTDTTGCKAPSNDAVCSGHGQCNCGRCSC 49
>AY334002-1|AAR01127.1| 194|Anopheles gambiae integrin protein.
Length = 194
Score = 24.6 bits (51), Expect = 4.1
Identities = 11/33 (33%), Positives = 13/33 (39%), Gaps = 1/33 (3%)
Frame = -3
Query: 280 NCSLTF-FLACKYPSIPIVAGAYSSLTCVECNC 185
NC T CK PS V + C C+C
Sbjct: 17 NCECTTDTTGCKAPSNDAVCSGHGQCNCGRCSC 49
>AY334001-1|AAR01126.1| 194|Anopheles gambiae integrin protein.
Length = 194
Score = 24.6 bits (51), Expect = 4.1
Identities = 11/33 (33%), Positives = 13/33 (39%), Gaps = 1/33 (3%)
Frame = -3
Query: 280 NCSLTF-FLACKYPSIPIVAGAYSSLTCVECNC 185
NC T CK PS V + C C+C
Sbjct: 17 NCECTTDTTGCKAPSNDAVCSGHGQCNCGRCSC 49
>AF492464-1|AAM11657.1| 803|Anopheles gambiae beta nu integrin
subunit AgBnu protein.
Length = 803
Score = 24.6 bits (51), Expect = 4.1
Identities = 11/33 (33%), Positives = 13/33 (39%), Gaps = 1/33 (3%)
Frame = -3
Query: 280 NCSLTF-FLACKYPSIPIVAGAYSSLTCVECNC 185
NC T CK PS V + C C+C
Sbjct: 593 NCECTTDTTGCKAPSNDAVCSGHGQCNCGRCSC 625
>AY578803-1|AAT07308.1| 474|Anopheles gambiae mothers against Dpp
protein.
Length = 474
Score = 24.2 bits (50), Expect = 5.5
Identities = 12/42 (28%), Positives = 19/42 (45%)
Frame = -1
Query: 645 LSQRPCTSHQTFHDNTVNQVISGMTLVDQKNHHLLVLQNTAV 520
+ R C H FH +TV ++ G +L N L + +V
Sbjct: 364 VQSRNCNHHHGFHPSTVCKIPPGCSLKIFNNQEFAQLLSQSV 405
>AY146717-1|AAO12077.1| 188|Anopheles gambiae odorant-binding
protein AgamOBP14 protein.
Length = 188
Score = 23.8 bits (49), Expect = 7.2
Identities = 9/29 (31%), Positives = 17/29 (58%)
Frame = +2
Query: 422 KIQHTKYRVQIWFIRVWPSCNEDVSFLRC 508
K++ + R ++ V+P+C E F+RC
Sbjct: 62 KLRIPEERFPLYLAGVFPNCPETQCFVRC 90
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 948,911
Number of Sequences: 2352
Number of extensions: 20248
Number of successful extensions: 87
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 83
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 87
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 96747534
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -