BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P28_F_O24
(897 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014297-3633|ABI31206.1| 128|Drosophila melanogaster CG34150-P... 32 0.93
AY122178-1|AAM52690.1| 1273|Drosophila melanogaster LD37006p pro... 31 1.6
AE014297-2058|AAF55207.1| 1273|Drosophila melanogaster CG18522-P... 31 1.6
AE014296-1377|AAF50483.1| 447|Drosophila melanogaster CG7962-PA... 31 2.1
BT022323-1|AAY54739.1| 243|Drosophila melanogaster IP08245p pro... 29 6.5
AY121683-1|AAM52010.1| 896|Drosophila melanogaster RE35807p pro... 29 6.5
AE014134-292|AAF51342.1| 244|Drosophila melanogaster CG17652-PA... 29 6.5
AE013599-1464|AAF58526.3| 874|Drosophila melanogaster CG13160-P... 29 6.5
AE014296-3425|AAF51645.2| 926|Drosophila melanogaster CG3680-PA... 29 8.6
>AE014297-3633|ABI31206.1| 128|Drosophila melanogaster CG34150-PA
protein.
Length = 128
Score = 32.3 bits (70), Expect = 0.93
Identities = 15/58 (25%), Positives = 31/58 (53%)
Frame = +3
Query: 303 KTKMNDFVSDSKNMIFTEDLKNMVHLAEPSDLQLVLNMIKKFNTQSTEFRFGSFVFGP 476
+ K+N+ ++N ++++ M+ LA+ DL+L N+I+ + R + VF P
Sbjct: 34 RLKINESFLQNRNESSEDEIQKMIKLAQDVDLELRTNVIQAQKKEDGTTRLDNVVFNP 91
>AY122178-1|AAM52690.1| 1273|Drosophila melanogaster LD37006p
protein.
Length = 1273
Score = 31.5 bits (68), Expect = 1.6
Identities = 13/48 (27%), Positives = 22/48 (45%)
Frame = +3
Query: 702 MAACYKENTPKSLEYATKLWSDMASTGTLPLRRAATSFAGLALKQGAP 845
M C + K EY +++W + +P+R A T L++K P
Sbjct: 291 MELCRQLENTKGFEYLSQVWQHLDWIANVPVRNAGTLAGNLSIKHAHP 338
>AE014297-2058|AAF55207.1| 1273|Drosophila melanogaster CG18522-PA
protein.
Length = 1273
Score = 31.5 bits (68), Expect = 1.6
Identities = 13/48 (27%), Positives = 22/48 (45%)
Frame = +3
Query: 702 MAACYKENTPKSLEYATKLWSDMASTGTLPLRRAATSFAGLALKQGAP 845
M C + K EY +++W + +P+R A T L++K P
Sbjct: 291 MELCRQLENTKGFEYLSQVWQHLDWIANVPVRNAGTLAGNLSIKHAHP 338
>AE014296-1377|AAF50483.1| 447|Drosophila melanogaster CG7962-PA
protein.
Length = 447
Score = 31.1 bits (67), Expect = 2.1
Identities = 9/31 (29%), Positives = 21/31 (67%)
Frame = -3
Query: 94 FNLILNEEKYIKLMILGHRKFKFSNFILGYI 2
F +++N +Y+K ++ HR F+ +I+G++
Sbjct: 163 FGVVINRVEYLKFLVTYHRFLSFALYIIGFV 193
>BT022323-1|AAY54739.1| 243|Drosophila melanogaster IP08245p
protein.
Length = 243
Score = 29.5 bits (63), Expect = 6.5
Identities = 13/48 (27%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +3
Query: 558 FDQQVSYQILLDLLYCHEMFDEMYRVFEKVQKK-QINMTKFPKYCVVL 698
FD + YQ+L+D +C + + E+++K Q + CV+L
Sbjct: 19 FDYREPYQVLIDATFCQAALQQKIGIDEQIKKYFQCGVKLLTTQCVIL 66
>AY121683-1|AAM52010.1| 896|Drosophila melanogaster RE35807p
protein.
Length = 896
Score = 29.5 bits (63), Expect = 6.5
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = -3
Query: 868 DIDSQAM*GAPCFNASPAKEVAALLSGNVPVE 773
D DS+ M G PC+ A+E A L+ PVE
Sbjct: 725 DCDSELMCGIPCYRYCSAREHALWLAREEPVE 756
>AE014134-292|AAF51342.1| 244|Drosophila melanogaster CG17652-PA
protein.
Length = 244
Score = 29.5 bits (63), Expect = 6.5
Identities = 13/48 (27%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +3
Query: 558 FDQQVSYQILLDLLYCHEMFDEMYRVFEKVQKK-QINMTKFPKYCVVL 698
FD + YQ+L+D +C + + E+++K Q + CV+L
Sbjct: 20 FDYREPYQVLIDATFCQAALQQKIGIDEQIKKYFQCGVKLLTTQCVIL 67
>AE013599-1464|AAF58526.3| 874|Drosophila melanogaster CG13160-PA
protein.
Length = 874
Score = 29.5 bits (63), Expect = 6.5
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = -3
Query: 868 DIDSQAM*GAPCFNASPAKEVAALLSGNVPVE 773
D DS+ M G PC+ A+E A L+ PVE
Sbjct: 703 DCDSELMCGIPCYRYCSAREHALWLAREEPVE 734
>AE014296-3425|AAF51645.2| 926|Drosophila melanogaster CG3680-PA
protein.
Length = 926
Score = 29.1 bits (62), Expect = 8.6
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +3
Query: 621 EMYRVFEKVQKKQINMTKFPK 683
EMYR +K+ +N+TKFP+
Sbjct: 876 EMYRTLKKLNHSAVNVTKFPR 896
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 39,271,738
Number of Sequences: 53049
Number of extensions: 831240
Number of successful extensions: 2134
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2087
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2134
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4362070239
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -